RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 TRPC5Q9UL62 973 aaPredicted RBP20.71■□□□□ 0.91
CD9-210ENST00000543916 AXIN2Q9Y2T1 843 aa20.7■□□□□ 0.9
CD9-210ENST00000543916 MAP2P11137 1827 aaKnown RBP20.69■□□□□ 0.9
CD9-210ENST00000543916 MAP3K19Q56UN5 1328 aa20.69■□□□□ 0.9
CD9-210ENST00000543916 VPS72Q15906 364 aa20.68■□□□□ 0.9
CD9-210ENST00000543916 RRS1Q15050 365 aaKnown RBP20.67■□□□□ 0.9
CD9-210ENST00000543916 STRN4Q9NRL3 753 aa20.67■□□□□ 0.9
CD9-210ENST00000543916 ILDR2Q71H61 639 aa20.66■□□□□ 0.9
CD9-210ENST00000543916 RXRBP28702 533 aa20.65■□□□□ 0.9
CD9-210ENST00000543916 RBM6P78332 1123 aaKnown RBP20.65■□□□□ 0.9
CD9-210ENST00000543916 GJD4Q96KN9 370 aaPredicted RBP20.65■□□□□ 0.9
CD9-210ENST00000543916 NPC1L1Q9UHC9 1359 aa20.64■□□□□ 0.89
CD9-210ENST00000543916 TNNT2P45379 298 aaPredicted RBP20.64■□□□□ 0.89
CD9-210ENST00000543916 CCDC9Q9Y3X0 531 aaKnown RBP20.64■□□□□ 0.89
CD9-210ENST00000543916 BLMP54132 1417 aaPredicted RBP20.63■□□□□ 0.89
CD9-210ENST00000543916 RTL1A6NKG5 1358 aa20.63■□□□□ 0.89
CD9-210ENST00000543916 EVA1CP58658 441 aa20.63■□□□□ 0.89
CD9-210ENST00000543916 LARP1Q6PKG0 1096 aaKnown RBP20.63■□□□□ 0.89
CD9-210ENST00000543916 MORC1Q86VD1 984 aa20.63■□□□□ 0.89
CD9-210ENST00000543916 IP6K1Q92551 441 aa20.63■□□□□ 0.89
CD9-210ENST00000543916 FAM208AQ9UK61 1670 aaKnown RBP20.63■□□□□ 0.89
CD9-210ENST00000543916 CDK12Q9NYV4 1490 aaPredicted RBP20.62■□□□□ 0.89
CD9-210ENST00000543916 RGS12O14924 1447 aa20.62■□□□□ 0.89
CD9-210ENST00000543916 WNK3Q9BYP7 1800 aa20.62■□□□□ 0.89
CD9-210ENST00000543916 SPATA31A5Q5VU36 1347 aa20.62■□□□□ 0.89
CD9-210ENST00000543916 SPATA31A7Q8IWB4 1347 aa20.62■□□□□ 0.89
CD9-210ENST00000543916 HOXC9P31274 260 aa20.62■□□□□ 0.89
CD9-210ENST00000543916 CC2D1BQ5T0F9 858 aaKnown RBP20.62■□□□□ 0.89
CD9-210ENST00000543916 EMILIN1Q9Y6C2 1016 aa20.62■□□□□ 0.89
CD9-210ENST00000543916 CRB1P82279 1406 aa20.61■□□□□ 0.89
CD9-210ENST00000543916 ZNF316A6NFI3 1004 aaPredicted RBP20.61■□□□□ 0.89
CD9-210ENST00000543916 AMPHP49418 695 aa20.61■□□□□ 0.89
CD9-210ENST00000543916 DDX10Q13206 875 aaKnown RBP20.61■□□□□ 0.89
CD9-210ENST00000543916 RGPD2P0DJD1 1756 aa20.61■□□□□ 0.89
CD9-210ENST00000543916 SPATA31A1Q5TZJ5 1347 aa20.6■□□□□ 0.89
CD9-210ENST00000543916 WDR17Q8IZU2 1322 aa20.6■□□□□ 0.89
CD9-210ENST00000543916 CNGB1Q14028 1251 aaPredicted RBP20.6■□□□□ 0.89
CD9-210ENST00000543916 THSD7AQ9UPZ6 1657 aa20.6■□□□□ 0.89
CD9-210ENST00000543916 SMG6Q86US8 1419 aaKnown RBP20.6■□□□□ 0.89
CD9-210ENST00000543916 FLT4P35916 1363 aa20.59■□□□□ 0.89
CD9-210ENST00000543916 KIF24Q5T7B8 1368 aa20.59■□□□□ 0.89
CD9-210ENST00000543916 ERBB3P21860 1342 aa20.59■□□□□ 0.89
CD9-210ENST00000543916 POLKQ9UBT6 870 aa20.59■□□□□ 0.89
CD9-210ENST00000543916 BRWD3Q6RI45 1802 aa20.58■□□□□ 0.89
CD9-210ENST00000543916 ANKRD24Q8TF21 1146 aa20.58■□□□□ 0.89
CD9-210ENST00000543916 INSRP06213 1382 aa20.57■□□□□ 0.88
CD9-210ENST00000543916 CSB-PGBD3P0DP91 1061 aa20.56■□□□□ 0.88
CD9-210ENST00000543916 TOM1L2Q6ZVM7 507 aa20.56■□□□□ 0.88
CD9-210ENST00000543916 USP35Q9P2H5 1018 aa20.56■□□□□ 0.88
CD9-210ENST00000543916 PPM1GO15355 546 aaPredicted RBP20.55■□□□□ 0.88
CD9-210ENST00000543916 FAM98CQ17RN3 349 aaKnown RBP20.55■□□□□ 0.88
CD9-210ENST00000543916 HSP90AB2PQ58FF8 381 aa20.55■□□□□ 0.88
CD9-210ENST00000543916 LTV1Q96GA3 475 aaPredicted RBP20.55■□□□□ 0.88
CD9-210ENST00000543916 PARP4Q9UKK3 1724 aaKnown RBP20.53■□□□□ 0.88
CD9-210ENST00000543916 ONECUT3O60422 494 aaPredicted RBP20.53■□□□□ 0.88
CD9-210ENST00000543916 CARD10Q9BWT7 1032 aa20.53■□□□□ 0.88
CD9-210ENST00000543916 TCP11L2Q8N4U5 519 aa20.52■□□□□ 0.88
CD9-210ENST00000543916 LRRC37A3O60309 1634 aa20.52■□□□□ 0.88
CD9-210ENST00000543916 BARGINQ6ZT62 677 aa20.51■□□□□ 0.87
CD9-210ENST00000543916 SEPT12Q8IYM1 358 aa20.51■□□□□ 0.87
CD9-210ENST00000543916 NLRP2Q9NX02 1062 aa20.51■□□□□ 0.87
CD9-210ENST00000543916 THRAP3Q9Y2W1 955 aaKnown RBP20.51■□□□□ 0.87
CD9-210ENST00000543916 DISP2A7MBM2 1401 aa20.49■□□□□ 0.87
CD9-210ENST00000543916 PARD3Q8TEW0 1356 aa20.48■□□□□ 0.87
CD9-210ENST00000543916 A0A0G2JS52 829 aa20.48■□□□□ 0.87
CD9-210ENST00000543916 MYT1Q01538 1121 aa20.48■□□□□ 0.87
CD9-210ENST00000543916 MTHFSP49914 203 aa20.47■□□□□ 0.87
CD9-210ENST00000543916 EIF4A2Q14240 407 aaKnown RBP20.46■□□□□ 0.87
CD9-210ENST00000543916 NBPF6Q5VWK0 638 aa20.46■□□□□ 0.87
CD9-210ENST00000543916 NBPF4Q96M43 638 aa20.46■□□□□ 0.87
CD9-210ENST00000543916 RGPD1P0DJD0 1748 aa20.46■□□□□ 0.87
CD9-210ENST00000543916 NCAPD2Q15021 1401 aa20.45■□□□□ 0.86
CD9-210ENST00000543916 USHBP1Q8N6Y0 703 aa20.45■□□□□ 0.86
CD9-210ENST00000543916 COL3A1P02461 1466 aaPredicted RBP20.44■□□□□ 0.86
CD9-210ENST00000543916 PPP2R1AP30153 589 aa20.44■□□□□ 0.86
CD9-210ENST00000543916 SHANK3Q9BYB0 1731 aa20.42■□□□□ 0.86
CD9-210ENST00000543916 MEGF6O75095 1541 aa20.42■□□□□ 0.86
CD9-210ENST00000543916 KRT27Q7Z3Y8 459 aa20.41■□□□□ 0.86
CD9-210ENST00000543916 EYA1Q99502 592 aa20.41■□□□□ 0.86
CD9-210ENST00000543916 IL2RBP14784 551 aa20.4■□□□□ 0.86
CD9-210ENST00000543916 TNS2Q63HR2 1409 aa20.4■□□□□ 0.86
CD9-210ENST00000543916 CDCA7Q9BWT1 371 aaPredicted RBP20.4■□□□□ 0.86
CD9-210ENST00000543916 IL13P35225 146 aa20.39■□□□□ 0.85
CD9-210ENST00000543916 IGSF1Q8N6C5 1336 aa20.38■□□□□ 0.85
CD9-210ENST00000543916 DDB1Q16531 1140 aa20.38■□□□□ 0.85
CD9-210ENST00000543916 PKD1L3Q7Z443 1732 aa20.38■□□□□ 0.85
CD9-210ENST00000543916 OVOS2A0A0G2JMS6 1433 aa20.37■□□□□ 0.85
CD9-210ENST00000543916 RALBP1Q15311 655 aa20.37■□□□□ 0.85
CD9-210ENST00000543916 FAM182BQ5T319 152 aa20.37■□□□□ 0.85
CD9-210ENST00000543916 EP400Q96L91 3159 aa20.36■□□□□ 0.85
CD9-210ENST00000543916 DIAPH1O60610 1272 aaKnown RBP20.35■□□□□ 0.85
CD9-210ENST00000543916 PDE3BQ13370 1112 aa20.35■□□□□ 0.85
CD9-210ENST00000543916 PRKRIP1Q9H875 184 aaPredicted RBP20.34■□□□□ 0.85
CD9-210ENST00000543916 SBF2Q86WG5 1849 aa20.33■□□□□ 0.85
CD9-210ENST00000543916 EXOC5O00471 708 aa20.33■□□□□ 0.85
CD9-210ENST00000543916 SOCS7O14512 581 aa20.33■□□□□ 0.85
CD9-210ENST00000543916 RAPGEF4Q8WZA2 1011 aa20.33■□□□□ 0.85
CD9-210ENST00000543916 CFAP53Q96M91 514 aa20.33■□□□□ 0.85
CD9-210ENST00000543916 MYBBP1AQ9BQG0 1328 aaKnown RBP20.32■□□□□ 0.84
CD9-210ENST00000543916 TATP17735 454 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms