RNA–Protein interactions for RNA: ENST00000543755.1

CD4-211, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 494 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-211ENST00000543755 SBF2Q86WG5 1849 aa13.14□□□□□ -0.31
CD4-211ENST00000543755 TOMM70O94826 608 aa13.14□□□□□ -0.31
CD4-211ENST00000543755 SLC16A10Q8TF71 515 aa13.14□□□□□ -0.31
CD4-211ENST00000543755 CRB1P82279 1406 aa13.13□□□□□ -0.31
CD4-211ENST00000543755 PHRF1Q9P1Y6 1649 aaKnown RBP13.13□□□□□ -0.31
CD4-211ENST00000543755 TOPAZ1Q8N9V7 1692 aa13.13□□□□□ -0.31
CD4-211ENST00000543755 MARCH10Q8NA82 808 aaPredicted RBP13.13□□□□□ -0.31
CD4-211ENST00000543755 HIRIP3Q9BW71 556 aaPredicted RBP13.13□□□□□ -0.31
CD4-211ENST00000543755 PIK3C2GO75747 1445 aa13.13□□□□□ -0.31
CD4-211ENST00000543755 CDCA7Q9BWT1 371 aaPredicted RBP13.12□□□□□ -0.31
CD4-211ENST00000543755 WDR90Q96KV7 1748 aa13.12□□□□□ -0.31
CD4-211ENST00000543755 LRRC37A3O60309 1634 aa13.12□□□□□ -0.31
CD4-211ENST00000543755 CPDO75976 1380 aa13.11□□□□□ -0.31
CD4-211ENST00000543755 ZBTB7CA1YPR0 619 aa13.11□□□□□ -0.31
CD4-211ENST00000543755 HSPA1AP0DMV8 641 aaKnown RBP13.11□□□□□ -0.31
CD4-211ENST00000543755 HSPA1BP0DMV9 641 aaKnown RBP13.11□□□□□ -0.31
CD4-211ENST00000543755 TOM1L2Q6ZVM7 507 aa13.11□□□□□ -0.31
CD4-211ENST00000543755 SLC4A1APQ9BWU0 796 aaKnown RBP13.11□□□□□ -0.31
CD4-211ENST00000543755 BCL9O00512 1426 aa13.11□□□□□ -0.31
CD4-211ENST00000543755 LOC105371045A0A1W2PR82 267 aa13.1□□□□□ -0.31
CD4-211ENST00000543755 C14orf93Q9H972 538 aaKnown RBP13.1□□□□□ -0.31
CD4-211ENST00000543755 COL5A2P05997 1499 aaPredicted RBP13.1□□□□□ -0.31
CD4-211ENST00000543755 TULP4Q9NRJ4 1543 aa13.09□□□□□ -0.31
CD4-211ENST00000543755 FAM161AQ3B820 660 aa13.09□□□□□ -0.31
CD4-211ENST00000543755 ABTB2Q8N961 1025 aa13.09□□□□□ -0.31
CD4-211ENST00000543755 MINK1Q8N4C8 1332 aaPredicted RBP13.09□□□□□ -0.31
CD4-211ENST00000543755 PRR36Q9H6K5 1346 aa13.09□□□□□ -0.31
CD4-211ENST00000543755 WASLO00401 505 aaPredicted RBP13.08□□□□□ -0.32
CD4-211ENST00000543755 CFAP70Q5T0N1 1121 aa13.07□□□□□ -0.32
CD4-211ENST00000543755 ACSBG1Q96GR2 724 aa13.07□□□□□ -0.32
CD4-211ENST00000543755 LMO7Q8WWI1 1683 aa13.07□□□□□ -0.32
CD4-211ENST00000543755 PAPPAQ13219 1627 aa13.06□□□□□ -0.32
CD4-211ENST00000543755 TNS2Q63HR2 1409 aa13.06□□□□□ -0.32
CD4-211ENST00000543755 EXOC5O00471 708 aa13.06□□□□□ -0.32
CD4-211ENST00000543755 MSH5O43196 834 aa13.06□□□□□ -0.32
CD4-211ENST00000543755 NLRP13Q86W25 1043 aa13.06□□□□□ -0.32
CD4-211ENST00000543755 C16orf71Q8IYS4 520 aaPredicted RBP13.06□□□□□ -0.32
CD4-211ENST00000543755 PNPLA7Q6ZV29 1317 aa13.06□□□□□ -0.32
CD4-211ENST00000543755 AKAP12Q02952 1782 aa13.05□□□□□ -0.32
CD4-211ENST00000543755 GCP02774 474 aa13.05□□□□□ -0.32
CD4-211ENST00000543755 TFCP2L1Q9NZI6 479 aa13.05□□□□□ -0.32
CD4-211ENST00000543755 NMRK2Q9NPI5 230 aa13.04□□□□□ -0.32
CD4-211ENST00000543755 RBM46Q8TBY0 533 aaKnown RBP13.03□□□□□ -0.32
CD4-211ENST00000543755 AKT1S1Q96B36 256 aa13.03□□□□□ -0.32
CD4-211ENST00000543755 LRRC4BQ9NT99 713 aa13.03□□□□□ -0.32
CD4-211ENST00000543755 TRAK1Q9UPV9 953 aa13.03□□□□□ -0.32
CD4-211ENST00000543755 BRD4O60885 1362 aaPredicted RBP13.03□□□□□ -0.32
CD4-211ENST00000543755 SPATA31E1Q6ZUB1 1445 aa13.03□□□□□ -0.32
CD4-211ENST00000543755 PCNTO95613 3336 aa13.03□□□□□ -0.32
CD4-211ENST00000543755 MSL1Q68DK7 614 aa13.02□□□□□ -0.33
CD4-211ENST00000543755 NUDT16Q96DE0 195 aaKnown RBP13.02□□□□□ -0.33
CD4-211ENST00000543755 ITSN1Q15811 1721 aa13.02□□□□□ -0.33
CD4-211ENST00000543755 CSB-PGBD3P0DP91 1061 aa13.01□□□□□ -0.33
CD4-211ENST00000543755 USP19O94966 1318 aa13.01□□□□□ -0.33
CD4-211ENST00000543755 ACEP12821 1306 aa13□□□□□ -0.33
CD4-211ENST00000543755 WDR17Q8IZU2 1322 aa13□□□□□ -0.33
CD4-211ENST00000543755 ARHGEF28Q8N1W1 1705 aaKnown RBP12.99□□□□□ -0.33
CD4-211ENST00000543755 FSTL1Q12841 308 aa12.99□□□□□ -0.33
CD4-211ENST00000543755 SLC27A3Q5K4L6 730 aa12.99□□□□□ -0.33
CD4-211ENST00000543755 CD2APQ9Y5K6 639 aa12.99□□□□□ -0.33
CD4-211ENST00000543755 USP6P35125 1406 aa12.97□□□□□ -0.33
CD4-211ENST00000543755 POLR3AO14802 1390 aaPredicted RBP12.97□□□□□ -0.33
CD4-211ENST00000543755 COL24A1Q17RW2 1714 aa12.97□□□□□ -0.33
CD4-211ENST00000543755 IGSF1Q8N6C5 1336 aa12.97□□□□□ -0.33
CD4-211ENST00000543755 NHSQ6T4R5 1651 aa12.97□□□□□ -0.33
CD4-211ENST00000543755 KCNQ4P56696 695 aa12.97□□□□□ -0.33
CD4-211ENST00000543755 CARD10Q9BWT7 1032 aa12.97□□□□□ -0.33
CD4-211ENST00000543755 CCDC61Q9Y6R9 512 aa12.96□□□□□ -0.33
CD4-211ENST00000543755 WNK3Q9BYP7 1800 aa12.95□□□□□ -0.34
CD4-211ENST00000543755 QSER1Q2KHR3 1735 aa12.95□□□□□ -0.34
CD4-211ENST00000543755 NLRP6P59044 892 aa12.94□□□□□ -0.34
CD4-211ENST00000543755 MLLT1Q03111 559 aaPredicted RBP12.94□□□□□ -0.34
CD4-211ENST00000543755 CCDC7Q96M83 1385 aa12.94□□□□□ -0.34
CD4-211ENST00000543755 PLEKHG3A1L390 1219 aa12.93□□□□□ -0.34
CD4-211ENST00000543755 CDK19Q9BWU1 502 aa12.93□□□□□ -0.34
CD4-211ENST00000543755 COL23A1Q86Y22 540 aaPredicted RBP12.92□□□□□ -0.34
CD4-211ENST00000543755 AXIN2Q9Y2T1 843 aa12.91□□□□□ -0.34
CD4-211ENST00000543755 BTAF1O14981 1849 aa12.9□□□□□ -0.34
CD4-211ENST00000543755 SMC1BQ8NDV3 1235 aa12.89□□□□□ -0.35
CD4-211ENST00000543755 TUBGCP6Q96RT7 1819 aa12.89□□□□□ -0.35
CD4-211ENST00000543755 ADGRB1O14514 1584 aa12.89□□□□□ -0.35
CD4-211ENST00000543755 PPIP5K1Q6PFW1 1433 aa12.88□□□□□ -0.35
CD4-211ENST00000543755 ABCC6O95255 1503 aa12.88□□□□□ -0.35
CD4-211ENST00000543755 FOXN1O15353 648 aa12.88□□□□□ -0.35
CD4-211ENST00000543755 HMGB2P26583 209 aaKnown RBP12.88□□□□□ -0.35
CD4-211ENST00000543755 ABHD8Q96I13 439 aa12.88□□□□□ -0.35
CD4-211ENST00000543755 KAT6BQ8WYB5 2073 aa12.88□□□□□ -0.35
CD4-211ENST00000543755 TRPM1Q7Z4N2 1603 aa12.88□□□□□ -0.35
CD4-211ENST00000543755 CPSF1Q10570 1443 aaKnown RBP12.88□□□□□ -0.35
CD4-211ENST00000543755 ARHGAP27Q6ZUM4 889 aa12.87□□□□□ -0.35
CD4-211ENST00000543755 KCNH5Q8NCM2 988 aa12.87□□□□□ -0.35
CD4-211ENST00000543755 SYTL4Q96C24 671 aaPredicted RBP12.87□□□□□ -0.35
CD4-211ENST00000543755 RRAGCQ9HB90 399 aa12.87□□□□□ -0.35
CD4-211ENST00000543755 IL2RBP14784 551 aa12.86□□□□□ -0.35
CD4-211ENST00000543755 FLAD1Q8NFF5 587 aa12.86□□□□□ -0.35
CD4-211ENST00000543755 PRDM10Q9NQV6 1147 aa12.86□□□□□ -0.35
CD4-211ENST00000543755 CCNL1Q9UK58 526 aaPredicted RBP12.86□□□□□ -0.35
CD4-211ENST00000543755 KDM2BQ8NHM5 1336 aa12.86□□□□□ -0.35
CD4-211ENST00000543755 CICQ96RK0 1608 aaPredicted RBP12.85□□□□□ -0.35
CD4-211ENST00000543755 SLIT3O75094 1523 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms