RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 EMILIN1Q9Y6C2 1016 aa15.97■□□□□ 0.15
DDB1-223ENST00000543658 FAM208AQ9UK61 1670 aaKnown RBP15.97■□□□□ 0.15
DDB1-223ENST00000543658 CPDO75976 1380 aa15.96■□□□□ 0.15
DDB1-223ENST00000543658 KIAA0232Q92628 1395 aa15.96■□□□□ 0.15
DDB1-223ENST00000543658 COL18A1P39060 1754 aa15.95■□□□□ 0.14
DDB1-223ENST00000543658 BLMP54132 1417 aaPredicted RBP15.94■□□□□ 0.14
DDB1-223ENST00000543658 NWD2Q9ULI1 1742 aa15.94■□□□□ 0.14
DDB1-223ENST00000543658 MEX3CQ5U5Q3 659 aaKnown RBP15.94■□□□□ 0.14
DDB1-223ENST00000543658 ARHGEF25Q86VW2 580 aa15.94■□□□□ 0.14
DDB1-223ENST00000543658 LMO7Q8WWI1 1683 aa15.93■□□□□ 0.14
DDB1-223ENST00000543658 HOXC9P31274 260 aa15.93■□□□□ 0.14
DDB1-223ENST00000543658 NUDCQ9Y266 331 aa15.93■□□□□ 0.14
DDB1-223ENST00000543658 ADAMTS2O95450 1211 aa15.92■□□□□ 0.14
DDB1-223ENST00000543658 CHRNA2Q15822 529 aa15.92■□□□□ 0.14
DDB1-223ENST00000543658 IP6K1Q92551 441 aa15.92■□□□□ 0.14
DDB1-223ENST00000543658 RGPD2P0DJD1 1756 aa15.92■□□□□ 0.14
DDB1-223ENST00000543658 INSRP06213 1382 aa15.91■□□□□ 0.14
DDB1-223ENST00000543658 DIAPH1O60610 1272 aaKnown RBP15.91■□□□□ 0.14
DDB1-223ENST00000543658 WDR43Q15061 677 aaKnown RBP eCLIP15.91■□□□□ 0.14
DDB1-223ENST00000543658 COL3A1P02461 1466 aaPredicted RBP15.91■□□□□ 0.14
DDB1-223ENST00000543658 CSB-PGBD3P0DP91 1061 aa15.89■□□□□ 0.13
DDB1-223ENST00000543658 LTV1Q96GA3 475 aaPredicted RBP15.89■□□□□ 0.13
DDB1-223ENST00000543658 LRP6O75581 1613 aa15.89■□□□□ 0.13
DDB1-223ENST00000543658 NRAPQ86VF7 1730 aa15.88■□□□□ 0.13
DDB1-223ENST00000543658 U2SURPO15042 1029 aaKnown RBP15.88■□□□□ 0.13
DDB1-223ENST00000543658 HSP90AB2PQ58FF8 381 aa15.88■□□□□ 0.13
DDB1-223ENST00000543658 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.88■□□□□ 0.13
DDB1-223ENST00000543658 EVA1CP58658 441 aa15.87■□□□□ 0.13
DDB1-223ENST00000543658 ANKRD24Q8TF21 1146 aa15.87■□□□□ 0.13
DDB1-223ENST00000543658 RGPD1P0DJD0 1748 aa15.87■□□□□ 0.13
DDB1-223ENST00000543658 CAMTA1Q9Y6Y1 1673 aa15.86■□□□□ 0.13
DDB1-223ENST00000543658 COL5A2P05997 1499 aaPredicted RBP15.86■□□□□ 0.13
DDB1-223ENST00000543658 FAM83GA6ND36 823 aa15.86■□□□□ 0.13
DDB1-223ENST00000543658 EIF4A2Q14240 407 aaKnown RBP15.86■□□□□ 0.13
DDB1-223ENST00000543658 CCDC184Q52MB2 194 aa15.86■□□□□ 0.13
DDB1-223ENST00000543658 C8orf37Q96NL8 207 aa15.86■□□□□ 0.13
DDB1-223ENST00000543658 FAM9BQ8IZU0 186 aa15.85■□□□□ 0.13
DDB1-223ENST00000543658 NGLY1Q96IV0 654 aa15.85■□□□□ 0.13
DDB1-223ENST00000543658 STRN4Q9NRL3 753 aa15.85■□□□□ 0.13
DDB1-223ENST00000543658 BTG4Q9NY30 223 aa15.85■□□□□ 0.13
DDB1-223ENST00000543658 ERBB3P21860 1342 aa15.85■□□□□ 0.13
DDB1-223ENST00000543658 U2AF1L5P0DN76 240 aaPredicted RBP15.84■□□□□ 0.13
DDB1-223ENST00000543658 U2AF1Q01081 240 aaKnown RBP eCLIP15.84■□□□□ 0.132e-7■□□□□ 9.7
DDB1-223ENST00000543658 AXIN2Q9Y2T1 843 aa15.84■□□□□ 0.13
DDB1-223ENST00000543658 WNK3Q9BYP7 1800 aa15.83■□□□□ 0.12
DDB1-223ENST00000543658 NEFMP07197 916 aa15.83■□□□□ 0.12
DDB1-223ENST00000543658 IL13P35225 146 aa15.83■□□□□ 0.12
DDB1-223ENST00000543658 TOM1L2Q6ZVM7 507 aa15.82■□□□□ 0.12
DDB1-223ENST00000543658 PNNQ9H307 717 aaKnown RBP15.82■□□□□ 0.12
DDB1-223ENST00000543658 NLRP2Q9NX02 1062 aa15.82■□□□□ 0.12
DDB1-223ENST00000543658 WDR17Q8IZU2 1322 aa15.82■□□□□ 0.12
DDB1-223ENST00000543658 SLIT2O94813 1529 aa15.82■□□□□ 0.12
DDB1-223ENST00000543658 PARP4Q9UKK3 1724 aaKnown RBP15.82■□□□□ 0.12
DDB1-223ENST00000543658 CRB1P82279 1406 aa15.8■□□□□ 0.12
DDB1-223ENST00000543658 PNISRQ8TF01 805 aaKnown RBP15.8■□□□□ 0.12
DDB1-223ENST00000543658 IGSF1Q8N6C5 1336 aa15.79■□□□□ 0.12
DDB1-223ENST00000543658 EYA1Q99502 592 aa15.79■□□□□ 0.12
DDB1-223ENST00000543658 CCDC9Q9Y3X0 531 aaKnown RBP15.79■□□□□ 0.12
DDB1-223ENST00000543658 AFF2P51816 1311 aa15.78■□□□□ 0.12
DDB1-223ENST00000543658 MAPK8IP3Q9UPT6 1336 aa15.78■□□□□ 0.12
DDB1-223ENST00000543658 HMOX1P09601 288 aa15.78■□□□□ 0.12
DDB1-223ENST00000543658 SULT6B1Q6IMI4 303 aa15.78■□□□□ 0.12
DDB1-223ENST00000543658 UNC5CLQ8IV45 518 aa15.78■□□□□ 0.12
DDB1-223ENST00000543658 USP21Q9UK80 565 aa15.78■□□□□ 0.12
DDB1-223ENST00000543658 USHBP1Q8N6Y0 703 aa15.77■□□□□ 0.12
DDB1-223ENST00000543658 ADAMTS8Q9UP79 889 aa15.77■□□□□ 0.12
DDB1-223ENST00000543658 FCHSD2O94868 740 aa15.76■□□□□ 0.11
DDB1-223ENST00000543658 NBPF6Q5VWK0 638 aa15.76■□□□□ 0.11
DDB1-223ENST00000543658 LARP1Q6PKG0 1096 aaKnown RBP15.76■□□□□ 0.11
DDB1-223ENST00000543658 FNBP4Q8N3X1 1017 aaPredicted RBP15.76■□□□□ 0.11
DDB1-223ENST00000543658 NBPF4Q96M43 638 aa15.76■□□□□ 0.11
DDB1-223ENST00000543658 DLG5Q8TDM6 1919 aa15.76■□□□□ 0.11
DDB1-223ENST00000543658 RAPGEF4Q8WZA2 1011 aa15.75■□□□□ 0.11
DDB1-223ENST00000543658 CARD10Q9BWT7 1032 aa15.75■□□□□ 0.11
DDB1-223ENST00000543658 USP35Q9P2H5 1018 aa15.75■□□□□ 0.11
DDB1-223ENST00000543658 NCAPD2Q15021 1401 aa15.75■□□□□ 0.11
DDB1-223ENST00000543658 BCL9LQ86UU0 1499 aa15.74■□□□□ 0.11
DDB1-223ENST00000543658 VIRMAQ69YN4 1812 aaKnown RBP15.74■□□□□ 0.11
DDB1-223ENST00000543658 PRKAR2BP31323 418 aa15.74■□□□□ 0.11
DDB1-223ENST00000543658 KDRP35968 1356 aa15.74■□□□□ 0.11
DDB1-223ENST00000543658 TATP17735 454 aaPredicted RBP15.73■□□□□ 0.11
DDB1-223ENST00000543658 AEBP1Q8IUX7 1158 aa15.73■□□□□ 0.11
DDB1-223ENST00000543658 CCDC146Q8IYE0 955 aa15.73■□□□□ 0.11
DDB1-223ENST00000543658 RUNDC1Q96C34 613 aa15.73■□□□□ 0.11
DDB1-223ENST00000543658 RSPH6AQ9H0K4 717 aa15.73■□□□□ 0.11
DDB1-223ENST00000543658 TRPC5Q9UL62 973 aaPredicted RBP15.73■□□□□ 0.11
DDB1-223ENST00000543658 PKD1L3Q7Z443 1732 aa15.73■□□□□ 0.11
DDB1-223ENST00000543658 VPS72Q15906 364 aa15.72■□□□□ 0.11
DDB1-223ENST00000543658 ZNF772Q68DY9 489 aaPredicted RBP15.72■□□□□ 0.11
DDB1-223ENST00000543658 THRAP3Q9Y2W1 955 aaKnown RBP15.72■□□□□ 0.11
DDB1-223ENST00000543658 TCP11L2Q8N4U5 519 aa15.71■□□□□ 0.11
DDB1-223ENST00000543658 SPATA31A1Q5TZJ5 1347 aa15.7■□□□□ 0.1
DDB1-223ENST00000543658 SPATA31A5Q5VU36 1347 aa15.7■□□□□ 0.1
DDB1-223ENST00000543658 SPATA31A7Q8IWB4 1347 aa15.7■□□□□ 0.1
DDB1-223ENST00000543658 ATRNO75882 1429 aa15.7■□□□□ 0.1
DDB1-223ENST00000543658 IL2RBP14784 551 aa15.7■□□□□ 0.1
DDB1-223ENST00000543658 PLEKHG2Q9H7P9 1386 aa15.7■□□□□ 0.1
DDB1-223ENST00000543658 MEGF6O75095 1541 aa15.69■□□□□ 0.1
DDB1-223ENST00000543658 A0A0G2JS52 829 aa15.69■□□□□ 0.1
DDB1-223ENST00000543658 MYT1Q01538 1121 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms