RNA–Protein interactions for RNA: ENST00000543608.5

SPPL3-207, Transcript of signal peptide peptidase like 3, humanhuman

TSL 3

Gene SPPL3, Length 636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-207ENST00000543608 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.11■■□□□ 1.29
SPPL3-207ENST00000543608 TMC1Q8TDI8 760 aa23.11■■□□□ 1.29
SPPL3-207ENST00000543608 TOM1L2Q6ZVM7 507 aa23.1■■□□□ 1.29
SPPL3-207ENST00000543608 PEAK1Q9H792 1746 aa23.09■■□□□ 1.29
SPPL3-207ENST00000543608 KCNH5Q8NCM2 988 aa23.09■■□□□ 1.29
SPPL3-207ENST00000543608 NME9Q86XW9 330 aa23.08■■□□□ 1.29
SPPL3-207ENST00000543608 SLC12A5Q9H2X9 1139 aa23.08■■□□□ 1.29
SPPL3-207ENST00000543608 LRP5O75197 1615 aa23.08■■□□□ 1.28
SPPL3-207ENST00000543608 WDR17Q8IZU2 1322 aa23.08■■□□□ 1.28
SPPL3-207ENST00000543608 LTN1O94822 1766 aa23.07■■□□□ 1.28
SPPL3-207ENST00000543608 RREB1Q92766 1687 aa23.07■■□□□ 1.28
SPPL3-207ENST00000543608 APBA3O96018 575 aa23.07■■□□□ 1.28
SPPL3-207ENST00000543608 A0A1W2PP64 1363 aa23.06■■□□□ 1.28
SPPL3-207ENST00000543608 CAMKK2Q96RR4 588 aa23.06■■□□□ 1.28
SPPL3-207ENST00000543608 NUP188Q5SRE5 1749 aa23.05■■□□□ 1.28
SPPL3-207ENST00000543608 USP31Q70CQ4 1352 aa23.05■■□□□ 1.28
SPPL3-207ENST00000543608 SBF2Q86WG5 1849 aa23.04■■□□□ 1.28
SPPL3-207ENST00000543608 TESK2Q96S53 571 aa23.04■■□□□ 1.28
SPPL3-207ENST00000543608 OVOS2A0A0G2JMS6 1433 aa23.04■■□□□ 1.28
SPPL3-207ENST00000543608 OVOS2A0A0J9YW53 1432 aa23.04■■□□□ 1.28
SPPL3-207ENST00000543608 OVOS2Q6IE36 1432 aa23.04■■□□□ 1.28
SPPL3-207ENST00000543608 ABCC6O95255 1503 aa23.03■■□□□ 1.28
SPPL3-207ENST00000543608 EDC4Q6P2E9 1401 aaKnown RBP23.03■■□□□ 1.28
SPPL3-207ENST00000543608 ST20-MTHFSA0A0A6YYL1 179 aa23.03■■□□□ 1.28
SPPL3-207ENST00000543608 CSB-PGBD3P0DP91 1061 aa23.03■■□□□ 1.28
SPPL3-207ENST00000543608 R3HDM1Q15032 1099 aaKnown RBP23.03■■□□□ 1.28
SPPL3-207ENST00000543608 HDGFL2Q7Z4V5 671 aaPredicted RBP23.03■■□□□ 1.28
SPPL3-207ENST00000543608 DDB1Q16531 1140 aa23.01■■□□□ 1.27
SPPL3-207ENST00000543608 PARD3Q8TEW0 1356 aa23■■□□□ 1.27
SPPL3-207ENST00000543608 TERF2IPQ9NYB0 399 aa22.99■■□□□ 1.27
SPPL3-207ENST00000543608 CARD10Q9BWT7 1032 aa22.98■■□□□ 1.27
SPPL3-207ENST00000543608 MARCH10Q8NA82 808 aaPredicted RBP22.96■■□□□ 1.27
SPPL3-207ENST00000543608 PUS7Q96PZ0 661 aaKnown RBP22.96■■□□□ 1.27
SPPL3-207ENST00000543608 ERBB3P21860 1342 aa22.95■■□□□ 1.26
SPPL3-207ENST00000543608 PTF1AQ7RTS3 328 aa22.95■■□□□ 1.26
SPPL3-207ENST00000543608 USP47Q96K76 1375 aa22.95■■□□□ 1.26
SPPL3-207ENST00000543608 RGPD3A6NKT7 1758 aaPredicted RBP22.94■■□□□ 1.26
SPPL3-207ENST00000543608 RGPD4Q7Z3J3 1758 aa22.94■■□□□ 1.26
SPPL3-207ENST00000543608 CCDC7Q96M83 1385 aa22.94■■□□□ 1.26
SPPL3-207ENST00000543608 CDCA7Q9BWT1 371 aaPredicted RBP22.94■■□□□ 1.26
SPPL3-207ENST00000543608 NINLQ9Y2I6 1382 aa22.93■■□□□ 1.26
SPPL3-207ENST00000543608 TNS2Q63HR2 1409 aa22.92■■□□□ 1.26
SPPL3-207ENST00000543608 C11orf95C9JLR9 678 aaPredicted RBP22.91■■□□□ 1.26
SPPL3-207ENST00000543608 NLRP2Q9NX02 1062 aa22.91■■□□□ 1.26
SPPL3-207ENST00000543608 ANKRD24Q8TF21 1146 aa22.9■■□□□ 1.26
SPPL3-207ENST00000543608 ANKRD36BQ8N2N9 1353 aa22.89■■□□□ 1.25
SPPL3-207ENST00000543608 BCL9O00512 1426 aa22.88■■□□□ 1.25
SPPL3-207ENST00000543608 EXOC5O00471 708 aa22.87■■□□□ 1.25
SPPL3-207ENST00000543608 BCL11BQ9C0K0 894 aaPredicted RBP22.87■■□□□ 1.25
SPPL3-207ENST00000543608 FBLN1P23142 703 aa22.86■■□□□ 1.25
SPPL3-207ENST00000543608 TMF1P82094 1093 aa22.86■■□□□ 1.25
SPPL3-207ENST00000543608 NHSQ6T4R5 1651 aa22.86■■□□□ 1.25
SPPL3-207ENST00000543608 FAM208AQ9UK61 1670 aaKnown RBP22.86■■□□□ 1.25
SPPL3-207ENST00000543608 MYOM1P52179 1685 aa22.85■■□□□ 1.25
SPPL3-207ENST00000543608 NBPF14Q5TI25 921 aa22.85■■□□□ 1.25
SPPL3-207ENST00000543608 COG3Q96JB2 828 aa22.85■■□□□ 1.25
SPPL3-207ENST00000543608 PCGF6Q9BYE7 350 aa22.85■■□□□ 1.25
SPPL3-207ENST00000543608 RGPD2P0DJD1 1756 aa22.84■■□□□ 1.25
SPPL3-207ENST00000543608 LTV1Q96GA3 475 aaPredicted RBP22.84■■□□□ 1.25
SPPL3-207ENST00000543608 KIF20BQ96Q89 1820 aa22.84■■□□□ 1.25
SPPL3-207ENST00000543608 PLSCR1O15162 318 aa22.83■■□□□ 1.25
SPPL3-207ENST00000543608 SLC24A1O60721 1099 aa22.83■■□□□ 1.25
SPPL3-207ENST00000543608 IL2RBP14784 551 aa22.83■■□□□ 1.25
SPPL3-207ENST00000543608 MAP3K19Q56UN5 1328 aa22.82■■□□□ 1.24
SPPL3-207ENST00000543608 IP6K1Q92551 441 aa22.82■■□□□ 1.24
SPPL3-207ENST00000543608 ANO8Q9HCE9 1232 aaPredicted RBP22.82■■□□□ 1.24
SPPL3-207ENST00000543608 KCNQ2O43526 872 aa22.81■■□□□ 1.24
SPPL3-207ENST00000543608 ACSBG1Q96GR2 724 aa22.81■■□□□ 1.24
SPPL3-207ENST00000543608 GGNBP2Q9H3C7 697 aa22.8■■□□□ 1.24
SPPL3-207ENST00000543608 HOXC9P31274 260 aa22.79■■□□□ 1.24
SPPL3-207ENST00000543608 PROM2Q8N271 834 aa22.79■■□□□ 1.24
SPPL3-207ENST00000543608 BTAF1O14981 1849 aa22.79■■□□□ 1.24
SPPL3-207ENST00000543608 CASZ1Q86V15 1759 aa22.78■■□□□ 1.24
SPPL3-207ENST00000543608 FYB1O15117 783 aa22.77■■□□□ 1.24
SPPL3-207ENST00000543608 AMPHP49418 695 aa22.77■■□□□ 1.24
SPPL3-207ENST00000543608 RRS1Q15050 365 aaKnown RBP22.77■■□□□ 1.24
SPPL3-207ENST00000543608 KAT6BQ8WYB5 2073 aa22.77■■□□□ 1.23
SPPL3-207ENST00000543608 SHANK3Q9BYB0 1731 aa22.76■■□□□ 1.23
SPPL3-207ENST00000543608 TXNRD1Q16881 649 aa22.75■■□□□ 1.23
SPPL3-207ENST00000543608 CLSPNQ9HAW4 1339 aa22.74■■□□□ 1.23
SPPL3-207ENST00000543608 RTL1A6NKG5 1358 aa22.74■■□□□ 1.23
SPPL3-207ENST00000543608 MEGF6O75095 1541 aa22.73■■□□□ 1.23
SPPL3-207ENST00000543608 CDCA8Q53HL2 280 aa22.73■■□□□ 1.23
SPPL3-207ENST00000543608 PDGFDQ9GZP0 370 aaPredicted RBP22.73■■□□□ 1.23
SPPL3-207ENST00000543608 TIMELESSQ9UNS1 1208 aa22.73■■□□□ 1.23
SPPL3-207ENST00000543608 NSD3Q9BZ95 1437 aa22.73■■□□□ 1.23
SPPL3-207ENST00000543608 DOT1LQ8TEK3 1739 aa22.72■■□□□ 1.23
SPPL3-207ENST00000543608 DDX54Q8TDD1 881 aaKnown RBP22.71■■□□□ 1.23
SPPL3-207ENST00000543608 CARD14Q9BXL6 1004 aa22.71■■□□□ 1.23
SPPL3-207ENST00000543608 PAPPAQ13219 1627 aa22.71■■□□□ 1.23
SPPL3-207ENST00000543608 SPON1Q9HCB6 807 aa22.7■■□□□ 1.22
SPPL3-207ENST00000543608 USHBP1Q8N6Y0 703 aa22.69■■□□□ 1.22
SPPL3-207ENST00000543608 NBPF6Q5VWK0 638 aa22.67■■□□□ 1.22
SPPL3-207ENST00000543608 NBPF4Q96M43 638 aa22.67■■□□□ 1.22
SPPL3-207ENST00000543608 STK32BQ9NY57 414 aa22.67■■□□□ 1.22
SPPL3-207ENST00000543608 SMG6Q86US8 1419 aaKnown RBP22.66■■□□□ 1.22
SPPL3-207ENST00000543608 PPP1R1BQ9UD71 204 aaPredicted RBP22.66■■□□□ 1.22
SPPL3-207ENST00000543608 ZBTB7AO95365 584 aa22.65■■□□□ 1.22
SPPL3-207ENST00000543608 SLC15A2Q16348 729 aa22.65■■□□□ 1.22
SPPL3-207ENST00000543608 HSP90AB2PQ58FF8 381 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms