RNA–Protein interactions for RNA: ENST00000543510.1

TMEM258-207, Transcript of transmembrane protein 258, humanhuman

TSL 2 BASIC

Gene TMEM258, Length 1,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-207ENST00000543510 COL3A1P02461 1466 aaPredicted RBP19.87■□□□□ 0.77
TMEM258-207ENST00000543510 U2AF1L5P0DN76 240 aaPredicted RBP19.87■□□□□ 0.77
TMEM258-207ENST00000543510 U2AF1Q01081 240 aaKnown RBP eCLIP19.87■□□□□ 0.77
TMEM258-207ENST00000543510 BLMP54132 1417 aaPredicted RBP19.87■□□□□ 0.77
TMEM258-207ENST00000543510 RGPD5Q99666 1765 aa19.86■□□□□ 0.77
TMEM258-207ENST00000543510 HOXC9P31274 260 aa19.86■□□□□ 0.77
TMEM258-207ENST00000543510 PNPLA6Q8IY17 1366 aa19.86■□□□□ 0.77
TMEM258-207ENST00000543510 CHRNA2Q15822 529 aa19.85■□□□□ 0.77
TMEM258-207ENST00000543510 ARHGEF25Q86VW2 580 aa19.85■□□□□ 0.77
TMEM258-207ENST00000543510 NUTM2BA6NNL0 878 aaPredicted RBP19.84■□□□□ 0.77
TMEM258-207ENST00000543510 NUTM2EB1AL46 878 aaPredicted RBP19.84■□□□□ 0.77
TMEM258-207ENST00000543510 EIF4A2Q14240 407 aaKnown RBP19.84■□□□□ 0.77
TMEM258-207ENST00000543510 NUTM2AQ8IVF1 878 aaPredicted RBP19.84■□□□□ 0.77
TMEM258-207ENST00000543510 CCDC146Q8IYE0 955 aa19.84■□□□□ 0.77
TMEM258-207ENST00000543510 KIAA0232Q92628 1395 aa19.83■□□□□ 0.77
TMEM258-207ENST00000543510 IP6K1Q92551 441 aa19.83■□□□□ 0.76
TMEM258-207ENST00000543510 COL22A1Q8NFW1 1626 aaPredicted RBP19.82■□□□□ 0.76
TMEM258-207ENST00000543510 IL13P35225 146 aa19.82■□□□□ 0.76
TMEM258-207ENST00000543510 RTL1A6NKG5 1358 aa19.82■□□□□ 0.76
TMEM258-207ENST00000543510 PRDM11Q9NQV5 511 aa19.81■□□□□ 0.76
TMEM258-207ENST00000543510 HMOX1P09601 288 aa19.81■□□□□ 0.76
TMEM258-207ENST00000543510 HSPA1LP34931 641 aa19.81■□□□□ 0.76
TMEM258-207ENST00000543510 KIF24Q5T7B8 1368 aa19.81■□□□□ 0.76
TMEM258-207ENST00000543510 SALL2Q9Y467 1007 aaPredicted RBP19.79■□□□□ 0.76
TMEM258-207ENST00000543510 RGPD2P0DJD1 1756 aa19.79■□□□□ 0.76
TMEM258-207ENST00000543510 ADAMTS2O95450 1211 aa19.78■□□□□ 0.76
TMEM258-207ENST00000543510 AXIN2Q9Y2T1 843 aa19.78■□□□□ 0.76
TMEM258-207ENST00000543510 PDE3BQ13370 1112 aa19.78■□□□□ 0.76
TMEM258-207ENST00000543510 COL18A1P39060 1754 aa19.77■□□□□ 0.76
TMEM258-207ENST00000543510 CSB-PGBD3P0DP91 1061 aa19.77■□□□□ 0.76
TMEM258-207ENST00000543510 ANKRD24Q8TF21 1146 aa19.77■□□□□ 0.76
TMEM258-207ENST00000543510 CPDO75976 1380 aa19.76■□□□□ 0.75
TMEM258-207ENST00000543510 JCADQ9P266 1359 aa19.76■□□□□ 0.75
TMEM258-207ENST00000543510 NEFLP07196 543 aa19.75■□□□□ 0.75
TMEM258-207ENST00000543510 SULT6B1Q6IMI4 303 aa19.75■□□□□ 0.75
TMEM258-207ENST00000543510 SUPT16HQ9Y5B9 1047 aaKnown RBP19.75■□□□□ 0.75
TMEM258-207ENST00000543510 USHBP1Q8N6Y0 703 aa19.75■□□□□ 0.75
TMEM258-207ENST00000543510 EYA1Q99502 592 aa19.74■□□□□ 0.75
TMEM258-207ENST00000543510 MAPK8IP3Q9UPT6 1336 aa19.73■□□□□ 0.75
TMEM258-207ENST00000543510 RGPD1P0DJD0 1748 aa19.73■□□□□ 0.75
TMEM258-207ENST00000543510 FAM83GA6ND36 823 aa19.73■□□□□ 0.75
TMEM258-207ENST00000543510 PRKAR2BP31323 418 aa19.73■□□□□ 0.75
TMEM258-207ENST00000543510 AEBP1Q8IUX7 1158 aa19.73■□□□□ 0.75
TMEM258-207ENST00000543510 NEFMP07197 916 aa19.72■□□□□ 0.75
TMEM258-207ENST00000543510 RUNDC1Q96C34 613 aa19.72■□□□□ 0.75
TMEM258-207ENST00000543510 PNNQ9H307 717 aaKnown RBP19.72■□□□□ 0.75
TMEM258-207ENST00000543510 STRN4Q9NRL3 753 aa19.72■□□□□ 0.75
TMEM258-207ENST00000543510 APAF1O14727 1248 aa19.71■□□□□ 0.75
TMEM258-207ENST00000543510 EVA1CP58658 441 aa19.71■□□□□ 0.75
TMEM258-207ENST00000543510 FCHSD2O94868 740 aa19.71■□□□□ 0.75
TMEM258-207ENST00000543510 FKBP8Q14318 412 aa19.71■□□□□ 0.75
TMEM258-207ENST00000543510 NEUROD2Q15784 382 aa19.71■□□□□ 0.75
TMEM258-207ENST00000543510 RSPH6AQ9H0K4 717 aa19.71■□□□□ 0.75
TMEM258-207ENST00000543510 NLRP2Q9NX02 1062 aa19.71■□□□□ 0.75
TMEM258-207ENST00000543510 COL14A1Q05707 1796 aaKnown RBP19.71■□□□□ 0.75
TMEM258-207ENST00000543510 ERBB3P21860 1342 aa19.7■□□□□ 0.74
TMEM258-207ENST00000543510 CAMTA1Q9Y6Y1 1673 aa19.7■□□□□ 0.74
TMEM258-207ENST00000543510 NBPF6Q5VWK0 638 aa19.7■□□□□ 0.74
TMEM258-207ENST00000543510 NBPF4Q96M43 638 aa19.7■□□□□ 0.74
TMEM258-207ENST00000543510 RRP7AQ9Y3A4 280 aaKnown RBP19.7■□□□□ 0.74
TMEM258-207ENST00000543510 LMO7Q8WWI1 1683 aa19.69■□□□□ 0.74
TMEM258-207ENST00000543510 BTG4Q9NY30 223 aa19.69■□□□□ 0.74
TMEM258-207ENST00000543510 ABCC6O95255 1503 aa19.69■□□□□ 0.74
TMEM258-207ENST00000543510 IGSF1Q8N6C5 1336 aa19.69■□□□□ 0.74
TMEM258-207ENST00000543510 NGEFQ8N5V2 710 aa19.68■□□□□ 0.74
TMEM258-207ENST00000543510 PLCH1Q4KWH8 1693 aa19.68■□□□□ 0.74
TMEM258-207ENST00000543510 TOM1L2Q6ZVM7 507 aa19.67■□□□□ 0.74
TMEM258-207ENST00000543510 TCP11L2Q8N4U5 519 aa19.67■□□□□ 0.74
TMEM258-207ENST00000543510 PLEKHF1Q96S99 279 aa19.67■□□□□ 0.74
TMEM258-207ENST00000543510 FAM208AQ9UK61 1670 aaKnown RBP19.67■□□□□ 0.74
TMEM258-207ENST00000543510 MEX3CQ5U5Q3 659 aaKnown RBP19.66■□□□□ 0.74
TMEM258-207ENST00000543510 C8orf37Q96NL8 207 aa19.65■□□□□ 0.74
TMEM258-207ENST00000543510 COL5A2P05997 1499 aaPredicted RBP19.65■□□□□ 0.74
TMEM258-207ENST00000543510 SPATA31A6Q5VVP1 1343 aa19.65■□□□□ 0.74
TMEM258-207ENST00000543510 CDCA7LQ96GN5 454 aa19.65■□□□□ 0.74
TMEM258-207ENST00000543510 PHACTR3Q96KR7 559 aa19.65■□□□□ 0.74
TMEM258-207ENST00000543510 ZNF521Q96K83 1311 aa19.64■□□□□ 0.73
TMEM258-207ENST00000543510 LARP1Q6PKG0 1096 aaKnown RBP19.63■□□□□ 0.73
TMEM258-207ENST00000543510 NGLY1Q96IV0 654 aa19.63■□□□□ 0.73
TMEM258-207ENST00000543510 USP35Q9P2H5 1018 aa19.63■□□□□ 0.73
TMEM258-207ENST00000543510 WDR17Q8IZU2 1322 aa19.63■□□□□ 0.73
TMEM258-207ENST00000543510 LRP6O75581 1613 aa19.62■□□□□ 0.73
TMEM258-207ENST00000543510 DLG5Q8TDM6 1919 aa19.61■□□□□ 0.73
TMEM258-207ENST00000543510 GOLGA2Q08379 1002 aa19.61■□□□□ 0.73
TMEM258-207ENST00000543510 KDRP35968 1356 aa19.61■□□□□ 0.73
TMEM258-207ENST00000543510 TMPOP42166 694 aaKnown RBP19.6■□□□□ 0.73
TMEM258-207ENST00000543510 RIPK4P57078 832 aa19.6■□□□□ 0.73
TMEM258-207ENST00000543510 FBXO41Q8TF61 875 aa19.59■□□□□ 0.73
TMEM258-207ENST00000543510 RAPGEF4Q8WZA2 1011 aa19.59■□□□□ 0.73
TMEM258-207ENST00000543510 CCDC9Q9Y3X0 531 aaKnown RBP19.59■□□□□ 0.73
TMEM258-207ENST00000543510 NFE2L2Q16236 605 aa19.59■□□□□ 0.73
TMEM258-207ENST00000543510 NCBP3Q53F19 620 aaKnown RBP19.59■□□□□ 0.73
TMEM258-207ENST00000543510 NRAPQ86VF7 1730 aa19.58■□□□□ 0.72
TMEM258-207ENST00000543510 NWD2Q9ULI1 1742 aa19.58■□□□□ 0.72
TMEM258-207ENST00000543510 RNF123Q5XPI4 1314 aa19.57■□□□□ 0.72
TMEM258-207ENST00000543510 CRB1P82279 1406 aa19.57■□□□□ 0.72
TMEM258-207ENST00000543510 TATP17735 454 aaPredicted RBP19.56■□□□□ 0.72
TMEM258-207ENST00000543510 MTHFSDQ2M296 383 aaKnown RBP19.56■□□□□ 0.72
TMEM258-207ENST00000543510 ERICH6BQ5W0A0 696 aa19.56■□□□□ 0.72
TMEM258-207ENST00000543510 SLFN5Q08AF3 891 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms