RNA–Protein interactions for RNA: ENST00000543507.1

KDM5A-209, Transcript of lysine demethylase 5A, humanhuman

TSL 4

Gene KDM5A, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-209ENST00000543507 TMF1P82094 1093 aa29.96■■■□□ 2.39
KDM5A-209ENST00000543507 WDR17Q8IZU2 1322 aa29.96■■■□□ 2.39
KDM5A-209ENST00000543507 EP400Q96L91 3159 aa29.95■■■□□ 2.39
KDM5A-209ENST00000543507 RGPD1P0DJD0 1748 aa29.95■■■□□ 2.38
KDM5A-209ENST00000543507 USP47Q96K76 1375 aa29.94■■■□□ 2.38
KDM5A-209ENST00000543507 CDCA8Q53HL2 280 aa29.94■■■□□ 2.38
KDM5A-209ENST00000543507 FAM182BQ5T319 152 aa29.94■■■□□ 2.38
KDM5A-209ENST00000543507 ABCC6O95255 1503 aa29.93■■■□□ 2.38
KDM5A-209ENST00000543507 CDCA7Q9BWT1 371 aaPredicted RBP29.93■■■□□ 2.38
KDM5A-209ENST00000543507 A0A1W2PP64 1363 aa29.92■■■□□ 2.38
KDM5A-209ENST00000543507 CSB-PGBD3P0DP91 1061 aa29.92■■■□□ 2.38
KDM5A-209ENST00000543507 CCER1Q8TC90 406 aaPredicted RBP29.92■■■□□ 2.38
KDM5A-209ENST00000543507 AXIN2Q9Y2T1 843 aa29.92■■■□□ 2.38
KDM5A-209ENST00000543507 COL18A1P39060 1754 aa29.92■■■□□ 2.38
KDM5A-209ENST00000543507 NME9Q86XW9 330 aa29.91■■■□□ 2.38
KDM5A-209ENST00000543507 NFAT5O94916 1531 aa29.91■■■□□ 2.38
KDM5A-209ENST00000543507 USP54Q70EL1 1684 aa29.9■■■□□ 2.38
KDM5A-209ENST00000543507 DISP2A7MBM2 1401 aa29.88■■■□□ 2.37
KDM5A-209ENST00000543507 CARD10Q9BWT7 1032 aa29.87■■■□□ 2.37
KDM5A-209ENST00000543507 PARP4Q9UKK3 1724 aaKnown RBP29.87■■■□□ 2.37
KDM5A-209ENST00000543507 TRIM37O94972 964 aa29.86■■■□□ 2.37
KDM5A-209ENST00000543507 DDB1Q16531 1140 aa29.86■■■□□ 2.37
KDM5A-209ENST00000543507 EN1Q05925 392 aaPredicted RBP29.85■■■□□ 2.37
KDM5A-209ENST00000543507 ANKRD36BQ8N2N9 1353 aa29.84■■■□□ 2.37
KDM5A-209ENST00000543507 CCDC7Q96M83 1385 aa29.84■■■□□ 2.37
KDM5A-209ENST00000543507 PARD3Q8TEW0 1356 aa29.82■■■□□ 2.36
KDM5A-209ENST00000543507 COG3Q96JB2 828 aa29.82■■■□□ 2.36
KDM5A-209ENST00000543507 APBA3O96018 575 aa29.81■■■□□ 2.36
KDM5A-209ENST00000543507 OVOS2A0A0G2JMS6 1433 aa29.8■■■□□ 2.36
KDM5A-209ENST00000543507 OVOS2A0A0J9YW53 1432 aa29.8■■■□□ 2.36
KDM5A-209ENST00000543507 OVOS2Q6IE36 1432 aa29.8■■■□□ 2.36
KDM5A-209ENST00000543507 TNS1Q9HBL0 1735 aaKnown RBP29.79■■■□□ 2.36
KDM5A-209ENST00000543507 RGPD5Q99666 1765 aa29.78■■■□□ 2.36
KDM5A-209ENST00000543507 ERBB3P21860 1342 aa29.77■■■□□ 2.36
KDM5A-209ENST00000543507 EXOC5O00471 708 aa29.76■■■□□ 2.35
KDM5A-209ENST00000543507 CAMKK2Q96RR4 588 aa29.75■■■□□ 2.35
KDM5A-209ENST00000543507 LTN1O94822 1766 aa29.75■■■□□ 2.35
KDM5A-209ENST00000543507 EZH2Q15910 746 aaKnown RBP29.74■■■□□ 2.35
KDM5A-209ENST00000543507 NLRP2Q9NX02 1062 aa29.74■■■□□ 2.35
KDM5A-209ENST00000543507 LRRC37A3O60309 1634 aa29.74■■■□□ 2.35
KDM5A-209ENST00000543507 IP6K1Q92551 441 aa29.73■■■□□ 2.35
KDM5A-209ENST00000543507 ANKRD24Q8TF21 1146 aa29.72■■■□□ 2.35
KDM5A-209ENST00000543507 WNK3Q9BYP7 1800 aa29.72■■■□□ 2.35
KDM5A-209ENST00000543507 BCL9O00512 1426 aa29.7■■■□□ 2.34
KDM5A-209ENST00000543507 AMPHP49418 695 aa29.68■■■□□ 2.34
KDM5A-209ENST00000543507 IL2RBP14784 551 aa29.67■■■□□ 2.34
KDM5A-209ENST00000543507 NBPF14Q5TI25 921 aa29.67■■■□□ 2.34
KDM5A-209ENST00000543507 MARCH10Q8NA82 808 aaPredicted RBP29.67■■■□□ 2.34
KDM5A-209ENST00000543507 BCL11BQ9C0K0 894 aaPredicted RBP29.67■■■□□ 2.34
KDM5A-209ENST00000543507 PEAK1Q9H792 1746 aa29.66■■■□□ 2.34
KDM5A-209ENST00000543507 FYB1O15117 783 aa29.66■■■□□ 2.34
KDM5A-209ENST00000543507 TNS2Q63HR2 1409 aa29.64■■■□□ 2.34
KDM5A-209ENST00000543507 PSDA5PKW4 1024 aaPredicted RBP29.64■■■□□ 2.34
KDM5A-209ENST00000543507 PLSCR1O15162 318 aa29.64■■■□□ 2.34
KDM5A-209ENST00000543507 EIF4G2P78344 907 aaKnown RBP eCLIP29.64■■■□□ 2.34
KDM5A-209ENST00000543507 MAP3K19Q56UN5 1328 aa29.64■■■□□ 2.34
KDM5A-209ENST00000543507 GGNBP2Q9H3C7 697 aa29.62■■■□□ 2.33
KDM5A-209ENST00000543507 FAM208AQ9UK61 1670 aaKnown RBP29.62■■■□□ 2.33
KDM5A-209ENST00000543507 RTL1A6NKG5 1358 aa29.62■■■□□ 2.33
KDM5A-209ENST00000543507 HOXC9P31274 260 aa29.61■■■□□ 2.33
KDM5A-209ENST00000543507 R3HDM1Q15032 1099 aaKnown RBP29.61■■■□□ 2.33
KDM5A-209ENST00000543507 LTV1Q96GA3 475 aaPredicted RBP29.59■■■□□ 2.33
KDM5A-209ENST00000543507 SBF2Q86WG5 1849 aa29.58■■■□□ 2.33
KDM5A-209ENST00000543507 RREB1Q92766 1687 aa29.57■■■□□ 2.32
KDM5A-209ENST00000543507 KIF24Q5T7B8 1368 aa29.56■■■□□ 2.32
KDM5A-209ENST00000543507 RGPD3A6NKT7 1758 aaPredicted RBP29.56■■■□□ 2.32
KDM5A-209ENST00000543507 RGPD4Q7Z3J3 1758 aa29.56■■■□□ 2.32
KDM5A-209ENST00000543507 SMG6Q86US8 1419 aaKnown RBP29.55■■■□□ 2.32
KDM5A-209ENST00000543507 LRP5O75197 1615 aa29.55■■■□□ 2.32
KDM5A-209ENST00000543507 KIF20BQ96Q89 1820 aa29.54■■■□□ 2.32
KDM5A-209ENST00000543507 NSD3Q9BZ95 1437 aa29.54■■■□□ 2.32
KDM5A-209ENST00000543507 RRS1Q15050 365 aaKnown RBP29.53■■■□□ 2.32
KDM5A-209ENST00000543507 CARD14Q9BXL6 1004 aa29.53■■■□□ 2.32
KDM5A-209ENST00000543507 MYOM1P52179 1685 aa29.53■■■□□ 2.32
KDM5A-209ENST00000543507 CGNL1Q0VF96 1302 aa29.52■■■□□ 2.32
KDM5A-209ENST00000543507 FBLN1P23142 703 aa29.52■■■□□ 2.32
KDM5A-209ENST00000543507 POLR3GLQ9BT43 218 aa29.52■■■□□ 2.32
KDM5A-209ENST00000543507 NUP188Q5SRE5 1749 aa29.51■■■□□ 2.31
KDM5A-209ENST00000543507 HSPA5P11021 654 aaKnown RBP29.5■■■□□ 2.31
KDM5A-209ENST00000543507 FLT4P35916 1363 aa29.49■■■□□ 2.31
KDM5A-209ENST00000543507 INSRP06213 1382 aa29.47■■■□□ 2.31
KDM5A-209ENST00000543507 PTF1AQ7RTS3 328 aa29.45■■■□□ 2.31
KDM5A-209ENST00000543507 DDX54Q8TDD1 881 aaKnown RBP29.45■■■□□ 2.31
KDM5A-209ENST00000543507 ACSBG1Q96GR2 724 aa29.44■■■□□ 2.3
KDM5A-209ENST00000543507 NHSQ6T4R5 1651 aa29.44■■■□□ 2.3
KDM5A-209ENST00000543507 ZCRB1Q8TBF4 217 aaKnown RBP29.43■■■□□ 2.3
KDM5A-209ENST00000543507 RAPGEF4Q8WZA2 1011 aa29.43■■■□□ 2.3
KDM5A-209ENST00000543507 KCNQ2O43526 872 aa29.42■■■□□ 2.3
KDM5A-209ENST00000543507 TXNRD1Q16881 649 aa29.42■■■□□ 2.3
KDM5A-209ENST00000543507 HSP90AB2PQ58FF8 381 aa29.41■■■□□ 2.3
KDM5A-209ENST00000543507 NBPF6Q5VWK0 638 aa29.41■■■□□ 2.3
KDM5A-209ENST00000543507 NBPF4Q96M43 638 aa29.41■■■□□ 2.3
KDM5A-209ENST00000543507 TATP17735 454 aaPredicted RBP29.39■■■□□ 2.3
KDM5A-209ENST00000543507 PROM2Q8N271 834 aa29.39■■■□□ 2.3
KDM5A-209ENST00000543507 STK32BQ9NY57 414 aa29.37■■■□□ 2.29
KDM5A-209ENST00000543507 PPM1GO15355 546 aaPredicted RBP29.36■■■□□ 2.29
KDM5A-209ENST00000543507 EMILIN1Q9Y6C2 1016 aa29.36■■■□□ 2.29
KDM5A-209ENST00000543507 PANK3Q9H999 370 aa29.35■■■□□ 2.29
KDM5A-209ENST00000543507 SPON1Q9HCB6 807 aa29.35■■■□□ 2.29
KDM5A-209ENST00000543507 RGPD2P0DJD1 1756 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms