RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 SLIT3O75094 1523 aa26.6■■□□□ 1.85
RAP1B-229ENST00000543393 ZBTB7AO95365 584 aa26.6■■□□□ 1.85
RAP1B-229ENST00000543393 COL18A1P39060 1754 aa26.59■■□□□ 1.85
RAP1B-229ENST00000543393 USP6P35125 1406 aa26.59■■□□□ 1.85
RAP1B-229ENST00000543393 MYOM1P52179 1685 aa26.59■■□□□ 1.85
RAP1B-229ENST00000543393 MARCH10Q8NA82 808 aaPredicted RBP26.58■■□□□ 1.85
RAP1B-229ENST00000543393 AKAP12Q02952 1782 aa26.58■■□□□ 1.85
RAP1B-229ENST00000543393 PTGER2P43116 358 aa26.57■■□□□ 1.84
RAP1B-229ENST00000543393 AXIN2Q9Y2T1 843 aa26.57■■□□□ 1.84
RAP1B-229ENST00000543393 CABP1Q9NZU7 370 aa26.56■■□□□ 1.84
RAP1B-229ENST00000543393 WDR17Q8IZU2 1322 aa26.56■■□□□ 1.84
RAP1B-229ENST00000543393 CENPJQ9HC77 1338 aaPredicted RBP26.56■■□□□ 1.84
RAP1B-229ENST00000543393 BCL9O00512 1426 aa26.56■■□□□ 1.84
RAP1B-229ENST00000543393 ATF5Q9Y2D1 282 aaPredicted RBP26.55■■□□□ 1.84
RAP1B-229ENST00000543393 CDCA7Q9BWT1 371 aaPredicted RBP26.54■■□□□ 1.84
RAP1B-229ENST00000543393 PIK3C2AO00443 1686 aa26.54■■□□□ 1.84
RAP1B-229ENST00000543393 TXNRD1Q16881 649 aa26.53■■□□□ 1.84
RAP1B-229ENST00000543393 ZNF784Q8NCA9 323 aaPredicted RBP26.53■■□□□ 1.84
RAP1B-229ENST00000543393 QRICH2Q9H0J4 1663 aa26.53■■□□□ 1.84
RAP1B-229ENST00000543393 UTRNP46939 3433 aa26.52■■□□□ 1.84
RAP1B-229ENST00000543393 STK32BQ9NY57 414 aa26.52■■□□□ 1.84
RAP1B-229ENST00000543393 RGPD5Q99666 1765 aa26.51■■□□□ 1.83
RAP1B-229ENST00000543393 CPSF1Q10570 1443 aaKnown RBP26.5■■□□□ 1.83
RAP1B-229ENST00000543393 SLC15A2Q16348 729 aa26.5■■□□□ 1.83
RAP1B-229ENST00000543393 FHDC1Q9C0D6 1143 aaPredicted RBP26.5■■□□□ 1.83
RAP1B-229ENST00000543393 SYT17Q9BSW7 474 aa26.49■■□□□ 1.83
RAP1B-229ENST00000543393 ARHGEF25Q86VW2 580 aa26.48■■□□□ 1.83
RAP1B-229ENST00000543393 CARD10Q9BWT7 1032 aa26.47■■□□□ 1.83
RAP1B-229ENST00000543393 CSB-PGBD3P0DP91 1061 aa26.46■■□□□ 1.83
RAP1B-229ENST00000543393 CHD4Q14839 1912 aa26.45■■□□□ 1.83
RAP1B-229ENST00000543393 EXOC5O00471 708 aa26.45■■□□□ 1.82
RAP1B-229ENST00000543393 MTFR1LQ9H019 292 aa26.45■■□□□ 1.82
RAP1B-229ENST00000543393 SOX12O15370 315 aa26.44■■□□□ 1.82
RAP1B-229ENST00000543393 KCNH5Q8NCM2 988 aa26.44■■□□□ 1.82
RAP1B-229ENST00000543393 SGIP1Q9BQI5 828 aa26.44■■□□□ 1.82
RAP1B-229ENST00000543393 TTC21BQ7Z4L5 1316 aa26.41■■□□□ 1.82
RAP1B-229ENST00000543393 EVC2Q86UK5 1308 aa26.39■■□□□ 1.82
RAP1B-229ENST00000543393 TNS2Q63HR2 1409 aa26.39■■□□□ 1.82
RAP1B-229ENST00000543393 TRPM1Q7Z4N2 1603 aa26.39■■□□□ 1.82
RAP1B-229ENST00000543393 NHSQ6T4R5 1651 aa26.39■■□□□ 1.82
RAP1B-229ENST00000543393 CCDC7Q96M83 1385 aa26.39■■□□□ 1.82
RAP1B-229ENST00000543393 ZNF692Q9BU19 519 aaPredicted RBP26.39■■□□□ 1.82
RAP1B-229ENST00000543393 SENP3-EIF4A1A0A087X0R7 540 aa26.37■■□□□ 1.81
RAP1B-229ENST00000543393 NFAT5O94916 1531 aa26.37■■□□□ 1.81
RAP1B-229ENST00000543393 ACSBG1Q96GR2 724 aa26.36■■□□□ 1.81
RAP1B-229ENST00000543393 ARXQ96QS3 562 aa26.36■■□□□ 1.81
RAP1B-229ENST00000543393 TTC21AQ8NDW8 1320 aa26.36■■□□□ 1.81
RAP1B-229ENST00000543393 PAPPAQ13219 1627 aa26.35■■□□□ 1.81
RAP1B-229ENST00000543393 C1QTNF8P60827 252 aa26.34■■□□□ 1.81
RAP1B-229ENST00000543393 ABCC6O95255 1503 aa26.32■■□□□ 1.8
RAP1B-229ENST00000543393 MAP3K5Q99683 1374 aa26.32■■□□□ 1.8
RAP1B-229ENST00000543393 BTAF1O14981 1849 aa26.3■■□□□ 1.8
RAP1B-229ENST00000543393 KAT6BQ8WYB5 2073 aa26.3■■□□□ 1.8
RAP1B-229ENST00000543393 ZNF827Q17R98 1081 aa26.29■■□□□ 1.8
RAP1B-229ENST00000543393 ERBB3P21860 1342 aa26.28■■□□□ 1.8
RAP1B-229ENST00000543393 KTN1Q86UP2 1357 aaKnown RBP26.28■■□□□ 1.8
RAP1B-229ENST00000543393 NLRP2Q9NX02 1062 aa26.27■■□□□ 1.8
RAP1B-229ENST00000543393 IL2RBP14784 551 aa26.26■■□□□ 1.79
RAP1B-229ENST00000543393 LRRC4BQ9NT99 713 aa26.26■■□□□ 1.79
RAP1B-229ENST00000543393 GPR162Q16538 588 aa26.25■■□□□ 1.79
RAP1B-229ENST00000543393 MON2Q7Z3U7 1717 aa26.25■■□□□ 1.79
RAP1B-229ENST00000543393 L3MBTL2Q969R5 705 aa26.24■■□□□ 1.79
RAP1B-229ENST00000543393 LTN1O94822 1766 aa26.23■■□□□ 1.79
RAP1B-229ENST00000543393 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.23■■□□□ 1.79
RAP1B-229ENST00000543393 USP31Q70CQ4 1352 aa26.21■■□□□ 1.79
RAP1B-229ENST00000543393 KLHL34Q8N239 644 aa26.21■■□□□ 1.79
RAP1B-229ENST00000543393 GOLGB1Q14789 3259 aaKnown RBP26.2■■□□□ 1.78
RAP1B-229ENST00000543393 USP54Q70EL1 1684 aa26.2■■□□□ 1.78
RAP1B-229ENST00000543393 AKT1S1Q96B36 256 aa26.2■■□□□ 1.78
RAP1B-229ENST00000543393 QSER1Q2KHR3 1735 aa26.19■■□□□ 1.78
RAP1B-229ENST00000543393 SLC16A10Q8TF71 515 aa26.19■■□□□ 1.78
RAP1B-229ENST00000543393 ROCK2O75116 1388 aaKnown RBP26.19■■□□□ 1.78
RAP1B-229ENST00000543393 NME9Q86XW9 330 aa26.18■■□□□ 1.78
RAP1B-229ENST00000543393 ANKRD24Q8TF21 1146 aa26.18■■□□□ 1.78
RAP1B-229ENST00000543393 COL24A1Q17RW2 1714 aa26.17■■□□□ 1.78
RAP1B-229ENST00000543393 GIGYF1O75420 1035 aaPredicted RBP26.17■■□□□ 1.78
RAP1B-229ENST00000543393 POLD1P28340 1107 aa26.17■■□□□ 1.78
RAP1B-229ENST00000543393 SLC27A3Q5K4L6 730 aa26.16■■□□□ 1.78
RAP1B-229ENST00000543393 PELP1Q8IZL8 1130 aaKnown RBP26.16■■□□□ 1.78
RAP1B-229ENST00000543393 PNPLA7Q6ZV29 1317 aa26.15■■□□□ 1.78
RAP1B-229ENST00000543393 SBNO2Q9Y2G9 1366 aa26.14■■□□□ 1.78
RAP1B-229ENST00000543393 TUBGCP6Q96RT7 1819 aa26.14■■□□□ 1.77
RAP1B-229ENST00000543393 CD163L1Q9NR16 1453 aa26.13■■□□□ 1.77
RAP1B-229ENST00000543393 NLGN2Q8NFZ4 835 aa26.12■■□□□ 1.77
RAP1B-229ENST00000543393 DDX54Q8TDD1 881 aaKnown RBP26.12■■□□□ 1.77
RAP1B-229ENST00000543393 KCNQ4P56696 695 aa26.11■■□□□ 1.77
RAP1B-229ENST00000543393 TFCP2L1Q9NZI6 479 aa26.11■■□□□ 1.77
RAP1B-229ENST00000543393 SHANK3Q9BYB0 1731 aa26.11■■□□□ 1.77
RAP1B-229ENST00000543393 IFFO2Q5TF58 517 aa26.08■■□□□ 1.77
RAP1B-229ENST00000543393 SYTL4Q96C24 671 aaPredicted RBP26.08■■□□□ 1.77
RAP1B-229ENST00000543393 SIN3AQ96ST3 1273 aa26.08■■□□□ 1.77
RAP1B-229ENST00000543393 CEP350Q5VT06 3117 aa26.07■■□□□ 1.76
RAP1B-229ENST00000543393 TMC1Q8TDI8 760 aa26.07■■□□□ 1.76
RAP1B-229ENST00000543393 LY75O60449 1722 aa26.06■■□□□ 1.76
RAP1B-229ENST00000543393 HDGFL2Q7Z4V5 671 aaPredicted RBP26.06■■□□□ 1.76
RAP1B-229ENST00000543393 EDC4Q6P2E9 1401 aaKnown RBP26.05■■□□□ 1.76
RAP1B-229ENST00000543393 DOT1LQ8TEK3 1739 aa26.05■■□□□ 1.76
RAP1B-229ENST00000543393 PRIM1P49642 420 aaKnown RBP26.05■■□□□ 1.76
RAP1B-229ENST00000543393 IP6K1Q92551 441 aa26.05■■□□□ 1.76
RAP1B-229ENST00000543393 LTV1Q96GA3 475 aaPredicted RBP26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms