RNA–Protein interactions for RNA: ENST00000543341.6

GTF2H3-212, Transcript of general transcription factor IIH subunit 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2H3, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF2H3-212	ENST00000543341	NME9	Q86XW9	330 aa		9.87	□□□□□ -0.83
GTF2H3-212	ENST00000543341	KNSTRN	Q9Y448	316 aa		9.86	□□□□□ -0.83
GTF2H3-212	ENST00000543341	DISP2	A7MBM2	1401 aa		9.86	□□□□□ -0.83
GTF2H3-212	ENST00000543341	ESCO1	Q5FWF5	840 aa		9.86	□□□□□ -0.83
GTF2H3-212	ENST00000543341	KRT28	Q7Z3Y7	464 aa		9.86	□□□□□ -0.83
GTF2H3-212	ENST00000543341	MRC1	P22897	1456 aa		9.86	□□□□□ -0.83
GTF2H3-212	ENST00000543341	POLK	Q9UBT6	870 aa		9.85	□□□□□ -0.83
GTF2H3-212	ENST00000543341	ZBTB22	O15209	634 aa		9.85	□□□□□ -0.83
GTF2H3-212	ENST00000543341	PSME1	Q06323	249 aa		9.85	□□□□□ -0.83
GTF2H3-212	ENST00000543341	NLRP13	Q86W25	1043 aa		9.85	□□□□□ -0.83
GTF2H3-212	ENST00000543341	FAM9B	Q8IZU0	186 aa		9.85	□□□□□ -0.83
GTF2H3-212	ENST00000543341	FLT4	P35916	1363 aa		9.85	□□□□□ -0.83
GTF2H3-212	ENST00000543341	PMFBP1	Q8TBY8	1022 aa		9.84	□□□□□ -0.83
GTF2H3-212	ENST00000543341	ARHGEF25	Q86VW2	580 aa		9.84	□□□□□ -0.83
GTF2H3-212	ENST00000543341	ZRANB1	Q9UGI0	708 aa		9.84	□□□□□ -0.83
GTF2H3-212	ENST00000543341	PNISR	Q8TF01	805 aa	Known RBP	9.84	□□□□□ -0.83
GTF2H3-212	ENST00000543341	RGPD3	A6NKT7	1758 aa	Predicted RBP	9.83	□□□□□ -0.84
GTF2H3-212	ENST00000543341	RGPD4	Q7Z3J3	1758 aa		9.83	□□□□□ -0.84
GTF2H3-212	ENST00000543341	OVOS2	A0A0G2JMS6	1433 aa		9.83	□□□□□ -0.84
GTF2H3-212	ENST00000543341	TOM1	O60784	492 aa		9.83	□□□□□ -0.84
GTF2H3-212	ENST00000543341	CCDC184	Q52MB2	194 aa		9.83	□□□□□ -0.84
GTF2H3-212	ENST00000543341	N4BP2	Q86UW6	1770 aa	Predicted RBP	9.83	□□□□□ -0.84
GTF2H3-212	ENST00000543341	RREB1	Q92766	1687 aa		9.82	□□□□□ -0.84
GTF2H3-212	ENST00000543341	SBF2	Q86WG5	1849 aa		9.82	□□□□□ -0.84
GTF2H3-212	ENST00000543341	JCAD	Q9P266	1359 aa		9.82	□□□□□ -0.84
GTF2H3-212	ENST00000543341	KCNH5	Q8NCM2	988 aa		9.82	□□□□□ -0.84
GTF2H3-212	ENST00000543341	TMC1	Q8TDI8	760 aa		9.82	□□□□□ -0.84
GTF2H3-212	ENST00000543341	IL13	P35225	146 aa		9.82	□□□□□ -0.84
GTF2H3-212	ENST00000543341	NBR1	Q14596	966 aa		9.81	□□□□□ -0.84
GTF2H3-212	ENST00000543341	RTL5	Q5HYW3	569 aa	Predicted RBP	9.81	□□□□□ -0.84
GTF2H3-212	ENST00000543341	PLEKHF1	Q96S99	279 aa		9.81	□□□□□ -0.84
GTF2H3-212	ENST00000543341	MAP3K19	Q56UN5	1328 aa		9.81	□□□□□ -0.84
GTF2H3-212	ENST00000543341	IGSF1	Q8N6C5	1336 aa		9.81	□□□□□ -0.84
GTF2H3-212	ENST00000543341	BCL9L	Q86UU0	1499 aa		9.81	□□□□□ -0.84
GTF2H3-212	ENST00000543341	FOXO3	O43524	673 aa		9.81	□□□□□ -0.84
GTF2H3-212	ENST00000543341	MRS2	Q9HD23	443 aa		9.81	□□□□□ -0.84
GTF2H3-212	ENST00000543341	SPATA31A6	Q5VVP1	1343 aa		9.81	□□□□□ -0.84
GTF2H3-212	ENST00000543341	NGDN	Q8NEJ9	315 aa	Known RBP	9.81	□□□□□ -0.84
GTF2H3-212	ENST00000543341	GGNBP2	Q9H3C7	697 aa		9.81	□□□□□ -0.84
GTF2H3-212	ENST00000543341	SENP3-EIF4A1	A0A087X0R7	540 aa		9.8	□□□□□ -0.84
GTF2H3-212	ENST00000543341	DDX17	Q92841	729 aa	Known RBP	9.8	□□□□□ -0.84
GTF2H3-212	ENST00000543341	COG3	Q96JB2	828 aa		9.8	□□□□□ -0.84
GTF2H3-212	ENST00000543341	ITGB4	P16144	1822 aa		9.79	□□□□□ -0.84
GTF2H3-212	ENST00000543341	IP6K1	Q92551	441 aa		9.79	□□□□□ -0.84
GTF2H3-212	ENST00000543341	LRRC59	Q96AG4	307 aa	Known RBP	9.79	□□□□□ -0.84
GTF2H3-212	ENST00000543341	ZNF521	Q96K83	1311 aa		9.79	□□□□□ -0.84
GTF2H3-212	ENST00000543341	NHS	Q6T4R5	1651 aa		9.79	□□□□□ -0.84
GTF2H3-212	ENST00000543341	HOXC9	P31274	260 aa		9.79	□□□□□ -0.84
GTF2H3-212	ENST00000543341	ATRN	O75882	1429 aa		9.79	□□□□□ -0.84
GTF2H3-212	ENST00000543341	LAMB4	A4D0S4	1761 aa		9.79	□□□□□ -0.84
GTF2H3-212	ENST00000543341	GC	P02774	474 aa		9.79	□□□□□ -0.84
GTF2H3-212	ENST00000543341	BRWD3	Q6RI45	1802 aa		9.78	□□□□□ -0.84
GTF2H3-212	ENST00000543341	DAXX	Q9UER7	740 aa	Predicted RBP	9.78	□□□□□ -0.84
GTF2H3-212	ENST00000543341	BCL9	O00512	1426 aa		9.78	□□□□□ -0.84
GTF2H3-212	ENST00000543341	CC2D1B	Q5T0F9	858 aa	Known RBP	9.77	□□□□□ -0.84
GTF2H3-212	ENST00000543341	NUTM2F	A1L443	756 aa		9.77	□□□□□ -0.85
GTF2H3-212	ENST00000543341	DEK	P35659	375 aa	Known RBP	9.77	□□□□□ -0.85
GTF2H3-212	ENST00000543341	MORC1	Q86VD1	984 aa		9.77	□□□□□ -0.85
GTF2H3-212	ENST00000543341	ABTB2	Q8N961	1025 aa		9.77	□□□□□ -0.85
GTF2H3-212	ENST00000543341	KIAA0232	Q92628	1395 aa		9.76	□□□□□ -0.85
GTF2H3-212	ENST00000543341	C14orf37	Q86TY3	774 aa		9.76	□□□□□ -0.85
GTF2H3-212	ENST00000543341	LY75	O60449	1722 aa		9.76	□□□□□ -0.85
GTF2H3-212	ENST00000543341	ERBB3	P21860	1342 aa		9.76	□□□□□ -0.85
GTF2H3-212	ENST00000543341	MSH5	O43196	834 aa		9.76	□□□□□ -0.85
GTF2H3-212	ENST00000543341	MTHFS	P49914	203 aa		9.76	□□□□□ -0.85
GTF2H3-212	ENST00000543341	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	9.76	□□□□□ -0.85
GTF2H3-212	ENST00000543341	MEGF6	O75095	1541 aa		9.76	□□□□□ -0.85
GTF2H3-212	ENST00000543341	DOT1L	Q8TEK3	1739 aa		9.76	□□□□□ -0.85
GTF2H3-212	ENST00000543341	CRB1	P82279	1406 aa		9.75	□□□□□ -0.85
GTF2H3-212	ENST00000543341	RSPH6A	Q9H0K4	717 aa		9.75	□□□□□ -0.85
GTF2H3-212	ENST00000543341	EMILIN1	Q9Y6C2	1016 aa		9.75	□□□□□ -0.85
GTF2H3-212	ENST00000543341	COL5A3	P25940	1745 aa	Predicted RBP	9.75	□□□□□ -0.85
GTF2H3-212	ENST00000543341	TNS1	Q9HBL0	1735 aa	Known RBP	9.75	□□□□□ -0.85
GTF2H3-212	ENST00000543341	EIF4A2	Q14240	407 aa	Known RBP	9.74	□□□□□ -0.85
GTF2H3-212	ENST00000543341	FNBP4	Q8N3X1	1017 aa	Predicted RBP	9.74	□□□□□ -0.85
GTF2H3-212	ENST00000543341	AXIN2	Q9Y2T1	843 aa		9.74	□□□□□ -0.85
GTF2H3-212	ENST00000543341	NLRP6	P59044	892 aa		9.74	□□□□□ -0.85
GTF2H3-212	ENST00000543341	FANCI	Q9NVI1	1328 aa		9.74	□□□□□ -0.85
GTF2H3-212	ENST00000543341	CCDC27	Q2M243	656 aa		9.73	□□□□□ -0.85
GTF2H3-212	ENST00000543341	PPP4R2	Q9NY27	417 aa		9.73	□□□□□ -0.85
GTF2H3-212	ENST00000543341	C5	P01031	1676 aa		9.73	□□□□□ -0.85
GTF2H3-212	ENST00000543341	UBAP1L	F5GYI3	381 aa		9.73	□□□□□ -0.85
GTF2H3-212	ENST00000543341	B4GALNT3	Q6L9W6	998 aa		9.73	□□□□□ -0.85
GTF2H3-212	ENST00000543341	FBXO41	Q8TF61	875 aa		9.73	□□□□□ -0.85
GTF2H3-212	ENST00000543341	ANP32A	P39687	249 aa	Known RBP	9.72	□□□□□ -0.85
GTF2H3-212	ENST00000543341	TJP1	Q07157	1748 aa		9.72	□□□□□ -0.85
GTF2H3-212	ENST00000543341	WDR17	Q8IZU2	1322 aa		9.72	□□□□□ -0.85
GTF2H3-212	ENST00000543341	QSER1	Q2KHR3	1735 aa		9.72	□□□□□ -0.85
GTF2H3-212	ENST00000543341	TNS2	Q63HR2	1409 aa		9.72	□□□□□ -0.85
GTF2H3-212	ENST00000543341	CEMIP	Q8WUJ3	1361 aa		9.71	□□□□□ -0.85
GTF2H3-212	ENST00000543341	XPC	Q01831	940 aa	Predicted RBP	9.71	□□□□□ -0.85
GTF2H3-212	ENST00000543341	NGEF	Q8N5V2	710 aa		9.71	□□□□□ -0.85
GTF2H3-212	ENST00000543341	FAM83G	A6ND36	823 aa		9.71	□□□□□ -0.86
GTF2H3-212	ENST00000543341	RRS1	Q15050	365 aa	Known RBP	9.71	□□□□□ -0.86
GTF2H3-212	ENST00000543341	TRMT2A	Q8IZ69	625 aa	Known RBP	9.71	□□□□□ -0.86
GTF2H3-212	ENST00000543341	FBLN1	P23142	703 aa		9.71	□□□□□ -0.86
GTF2H3-212	ENST00000543341	HSPA1L	P34931	641 aa		9.71	□□□□□ -0.86
GTF2H3-212	ENST00000543341	FCHSD2	O94868	740 aa		9.7	□□□□□ -0.86
GTF2H3-212	ENST00000543341	HSP90AB2P	Q58FF8	381 aa		9.7	□□□□□ -0.86
GTF2H3-212	ENST00000543341	COL24A1	Q17RW2	1714 aa		9.7	□□□□□ -0.86

Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms