RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 NBPF14Q5TI25 921 aa22.16■■□□□ 1.14
CSF1R-209ENST00000543093 ZNF692Q9BU19 519 aaPredicted RBP22.16■■□□□ 1.14
CSF1R-209ENST00000543093 AXIN2Q9Y2T1 843 aa22.16■■□□□ 1.14
CSF1R-209ENST00000543093 WDR17Q8IZU2 1322 aa22.15■■□□□ 1.14
CSF1R-209ENST00000543093 C11orf95C9JLR9 678 aaPredicted RBP22.15■■□□□ 1.14
CSF1R-209ENST00000543093 DDB1Q16531 1140 aa22.15■■□□□ 1.14
CSF1R-209ENST00000543093 SOX12O15370 315 aa22.14■■□□□ 1.13
CSF1R-209ENST00000543093 RGPD3A6NKT7 1758 aaPredicted RBP22.13■■□□□ 1.13
CSF1R-209ENST00000543093 RGPD4Q7Z3J3 1758 aa22.13■■□□□ 1.13
CSF1R-209ENST00000543093 ARHGEF25Q86VW2 580 aa22.13■■□□□ 1.13
CSF1R-209ENST00000543093 KCNH5Q8NCM2 988 aa22.13■■□□□ 1.13
CSF1R-209ENST00000543093 MON2Q7Z3U7 1717 aa22.13■■□□□ 1.13
CSF1R-209ENST00000543093 TTC21AQ8NDW8 1320 aa22.12■■□□□ 1.13
CSF1R-209ENST00000543093 KTN1Q86UP2 1357 aaKnown RBP22.12■■□□□ 1.13
CSF1R-209ENST00000543093 NFAT5O94916 1531 aa22.11■■□□□ 1.13
CSF1R-209ENST00000543093 CSB-PGBD3P0DP91 1061 aa22.09■■□□□ 1.13
CSF1R-209ENST00000543093 MARCH10Q8NA82 808 aaPredicted RBP22.08■■□□□ 1.13
CSF1R-209ENST00000543093 CDCA7Q9BWT1 371 aaPredicted RBP22.08■■□□□ 1.13
CSF1R-209ENST00000543093 PTF1AQ7RTS3 328 aa22.07■■□□□ 1.12
CSF1R-209ENST00000543093 CARD10Q9BWT7 1032 aa22.07■■□□□ 1.12
CSF1R-209ENST00000543093 BCL11BQ9C0K0 894 aaPredicted RBP22.07■■□□□ 1.12
CSF1R-209ENST00000543093 PLSCR1O15162 318 aa22.06■■□□□ 1.12
CSF1R-209ENST00000543093 ABCC6O95255 1503 aa22.06■■□□□ 1.12
CSF1R-209ENST00000543093 USP54Q70EL1 1684 aa22.05■■□□□ 1.12
CSF1R-209ENST00000543093 SBNO2Q9Y2G9 1366 aa22.05■■□□□ 1.12
CSF1R-209ENST00000543093 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.04■■□□□ 1.12
CSF1R-209ENST00000543093 LTN1O94822 1766 aa22.04■■□□□ 1.12
CSF1R-209ENST00000543093 CARD11Q9BXL7 1154 aa22.03■■□□□ 1.12
CSF1R-209ENST00000543093 SPON1Q9HCB6 807 aa22.03■■□□□ 1.12
CSF1R-209ENST00000543093 BCL9O00512 1426 aa22.03■■□□□ 1.12
CSF1R-209ENST00000543093 CD163L1Q9NR16 1453 aa22.03■■□□□ 1.12
CSF1R-209ENST00000543093 CCDC7Q96M83 1385 aa22.02■■□□□ 1.12
CSF1R-209ENST00000543093 KCNQ2O43526 872 aa22.02■■□□□ 1.12
CSF1R-209ENST00000543093 USP31Q70CQ4 1352 aa22.01■■□□□ 1.11
CSF1R-209ENST00000543093 EXOC5O00471 708 aa22.01■■□□□ 1.11
CSF1R-209ENST00000543093 NME9Q86XW9 330 aa22.01■■□□□ 1.11
CSF1R-209ENST00000543093 TMC1Q8TDI8 760 aa22.01■■□□□ 1.11
CSF1R-209ENST00000543093 ANO8Q9HCE9 1232 aaPredicted RBP22.01■■□□□ 1.11
CSF1R-209ENST00000543093 PPP1R1BQ9UD71 204 aaPredicted RBP22.01■■□□□ 1.11
CSF1R-209ENST00000543093 CASZ1Q86V15 1759 aa22.01■■□□□ 1.11
CSF1R-209ENST00000543093 TNS2Q63HR2 1409 aa21.99■■□□□ 1.11
CSF1R-209ENST00000543093 PROM2Q8N271 834 aa21.98■■□□□ 1.11
CSF1R-209ENST00000543093 TONSLQ96HA7 1378 aa21.98■■□□□ 1.11
CSF1R-209ENST00000543093 HDGFL2Q7Z4V5 671 aaPredicted RBP21.97■■□□□ 1.11
CSF1R-209ENST00000543093 NHSQ6T4R5 1651 aa21.96■■□□□ 1.11
CSF1R-209ENST00000543093 SLC12A5Q9H2X9 1139 aa21.96■■□□□ 1.11
CSF1R-209ENST00000543093 ERBB3P21860 1342 aa21.96■■□□□ 1.11
CSF1R-209ENST00000543093 NLRP2Q9NX02 1062 aa21.95■■□□□ 1.1
CSF1R-209ENST00000543093 EDC4Q6P2E9 1401 aaKnown RBP21.95■■□□□ 1.1
CSF1R-209ENST00000543093 TXNRD1Q16881 649 aa21.94■■□□□ 1.1
CSF1R-209ENST00000543093 PDGFDQ9GZP0 370 aaPredicted RBP21.94■■□□□ 1.1
CSF1R-209ENST00000543093 NINLQ9Y2I6 1382 aa21.94■■□□□ 1.1
CSF1R-209ENST00000543093 A0A1W2PP64 1363 aa21.92■■□□□ 1.1
CSF1R-209ENST00000543093 ANKRD24Q8TF21 1146 aa21.92■■□□□ 1.1
CSF1R-209ENST00000543093 TERF2IPQ9NYB0 399 aa21.92■■□□□ 1.1
CSF1R-209ENST00000543093 IL2RBP14784 551 aa21.91■■□□□ 1.1
CSF1R-209ENST00000543093 ACSBG1Q96GR2 724 aa21.91■■□□□ 1.1
CSF1R-209ENST00000543093 STK32BQ9NY57 414 aa21.91■■□□□ 1.1
CSF1R-209ENST00000543093 ZBTB7AO95365 584 aa21.9■■□□□ 1.1
CSF1R-209ENST00000543093 MYOM1P52179 1685 aa21.9■■□□□ 1.1
CSF1R-209ENST00000543093 BTAF1O14981 1849 aa21.9■■□□□ 1.1
CSF1R-209ENST00000543093 DCAF8L1A6NGE4 600 aa21.88■■□□□ 1.09
CSF1R-209ENST00000543093 YY1P25490 414 aa21.88■■□□□ 1.09
CSF1R-209ENST00000543093 SLC15A2Q16348 729 aa21.88■■□□□ 1.09
CSF1R-209ENST00000543093 PUS7Q96PZ0 661 aaKnown RBP21.88■■□□□ 1.09
CSF1R-209ENST00000543093 FAM208AQ9UK61 1670 aaKnown RBP21.87■■□□□ 1.09
CSF1R-209ENST00000543093 KAT6BQ8WYB5 2073 aa21.87■■□□□ 1.09
CSF1R-209ENST00000543093 ATF5Q9Y2D1 282 aaPredicted RBP21.86■■□□□ 1.09
CSF1R-209ENST00000543093 PAPPAQ13219 1627 aa21.84■■□□□ 1.09
CSF1R-209ENST00000543093 PTGER2P43116 358 aa21.84■■□□□ 1.09
CSF1R-209ENST00000543093 IP6K1Q92551 441 aa21.84■■□□□ 1.09
CSF1R-209ENST00000543093 ST20-MTHFSA0A0A6YYL1 179 aa21.83■■□□□ 1.09
CSF1R-209ENST00000543093 LTV1Q96GA3 475 aaPredicted RBP21.83■■□□□ 1.09
CSF1R-209ENST00000543093 TESK2Q96S53 571 aa21.83■■□□□ 1.09
CSF1R-209ENST00000543093 RGPD2P0DJD1 1756 aa21.8■■□□□ 1.08
CSF1R-209ENST00000543093 COG3Q96JB2 828 aa21.8■■□□□ 1.08
CSF1R-209ENST00000543093 DDX54Q8TDD1 881 aaKnown RBP21.79■■□□□ 1.08
CSF1R-209ENST00000543093 MTFR1LQ9H019 292 aa21.79■■□□□ 1.08
CSF1R-209ENST00000543093 MAP3K19Q56UN5 1328 aa21.79■■□□□ 1.08
CSF1R-209ENST00000543093 FBLN1P23142 703 aa21.77■■□□□ 1.08
CSF1R-209ENST00000543093 PCGF6Q9BYE7 350 aa21.77■■□□□ 1.08
CSF1R-209ENST00000543093 DOT1LQ8TEK3 1739 aa21.77■■□□□ 1.08
CSF1R-209ENST00000543093 HOXC9P31274 260 aa21.76■■□□□ 1.07
CSF1R-209ENST00000543093 AMPHP49418 695 aa21.76■■□□□ 1.07
CSF1R-209ENST00000543093 FHDC1Q9C0D6 1143 aaPredicted RBP21.76■■□□□ 1.07
CSF1R-209ENST00000543093 ANKRD36BQ8N2N9 1353 aa21.75■■□□□ 1.07
CSF1R-209ENST00000543093 SHANK3Q9BYB0 1731 aa21.75■■□□□ 1.07
CSF1R-209ENST00000543093 SLC24A1O60721 1099 aa21.75■■□□□ 1.07
CSF1R-209ENST00000543093 ZNF827Q17R98 1081 aa21.75■■□□□ 1.07
CSF1R-209ENST00000543093 SGIP1Q9BQI5 828 aa21.75■■□□□ 1.07
CSF1R-209ENST00000543093 LRRC4BQ9NT99 713 aa21.75■■□□□ 1.07
CSF1R-209ENST00000543093 SYT17Q9BSW7 474 aa21.74■■□□□ 1.07
CSF1R-209ENST00000543093 QSER1Q2KHR3 1735 aa21.73■■□□□ 1.07
CSF1R-209ENST00000543093 CLSPNQ9HAW4 1339 aa21.73■■□□□ 1.07
CSF1R-209ENST00000543093 SYTL4Q96C24 671 aaPredicted RBP21.72■■□□□ 1.07
CSF1R-209ENST00000543093 MEGF6O75095 1541 aa21.71■■□□□ 1.07
CSF1R-209ENST00000543093 ARXQ96QS3 562 aa21.71■■□□□ 1.07
CSF1R-209ENST00000543093 TUBGCP6Q96RT7 1819 aa21.71■■□□□ 1.07
CSF1R-209ENST00000543093 LY75O60449 1722 aa21.7■■□□□ 1.06
CSF1R-209ENST00000543093 PRIM1P49642 420 aaKnown RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms