RNA–Protein interactions for RNA: ENST00000542896.5

PDCD2-209, Transcript of programmed cell death 2, humanhuman

TSL 2 BASIC

Gene PDCD2, Length 1,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-209ENST00000542896 RREB1Q92766 1687 aa37.01■■■■□ 3.52
PDCD2-209ENST00000542896 KTN1Q86UP2 1357 aaKnown RBP37.01■■■■□ 3.51
PDCD2-209ENST00000542896 CSB-PGBD3P0DP91 1061 aa37■■■■□ 3.51
PDCD2-209ENST00000542896 CDCA7Q9BWT1 371 aaPredicted RBP36.99■■■■□ 3.51
PDCD2-209ENST00000542896 COL18A1P39060 1754 aa36.99■■■■□ 3.51
PDCD2-209ENST00000542896 NUP188Q5SRE5 1749 aa36.96■■■■□ 3.51
PDCD2-209ENST00000542896 LRRC37A3O60309 1634 aa36.96■■■■□ 3.51
PDCD2-209ENST00000542896 AKAP12Q02952 1782 aa36.96■■■■□ 3.51
PDCD2-209ENST00000542896 CARD11Q9BXL7 1154 aa36.95■■■■□ 3.51
PDCD2-209ENST00000542896 CARD10Q9BWT7 1032 aa36.94■■■■□ 3.5
PDCD2-209ENST00000542896 PEAK1Q9H792 1746 aa36.93■■■■□ 3.5
PDCD2-209ENST00000542896 SBNO2Q9Y2G9 1366 aa36.92■■■■□ 3.5
PDCD2-209ENST00000542896 PLSCR1O15162 318 aa36.91■■■■□ 3.5
PDCD2-209ENST00000542896 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.91■■■■□ 3.5
PDCD2-209ENST00000542896 MARCH10Q8NA82 808 aaPredicted RBP36.9■■■■□ 3.5
PDCD2-209ENST00000542896 BCL11BQ9C0K0 894 aaPredicted RBP36.9■■■■□ 3.5
PDCD2-209ENST00000542896 NFAT5O94916 1531 aa36.88■■■■□ 3.49
PDCD2-209ENST00000542896 TMC1Q8TDI8 760 aa36.87■■■■□ 3.49
PDCD2-209ENST00000542896 EXOC5O00471 708 aa36.85■■■■□ 3.49
PDCD2-209ENST00000542896 PTF1AQ7RTS3 328 aa36.85■■■■□ 3.49
PDCD2-209ENST00000542896 CCDC7Q96M83 1385 aa36.85■■■■□ 3.49
PDCD2-209ENST00000542896 USP31Q70CQ4 1352 aa36.84■■■■□ 3.49
PDCD2-209ENST00000542896 HDGFL2Q7Z4V5 671 aaPredicted RBP36.84■■■■□ 3.49
PDCD2-209ENST00000542896 WNK3Q9BYP7 1800 aa36.83■■■■□ 3.49
PDCD2-209ENST00000542896 TONSLQ96HA7 1378 aa36.83■■■■□ 3.49
PDCD2-209ENST00000542896 NME9Q86XW9 330 aa36.83■■■■□ 3.49
PDCD2-209ENST00000542896 SPON1Q9HCB6 807 aa36.83■■■■□ 3.49
PDCD2-209ENST00000542896 BCL9O00512 1426 aa36.83■■■■□ 3.49
PDCD2-209ENST00000542896 MON2Q7Z3U7 1717 aa36.82■■■■□ 3.48
PDCD2-209ENST00000542896 ABCC6O95255 1503 aa36.81■■■■□ 3.48
PDCD2-209ENST00000542896 KCNQ2O43526 872 aa36.8■■■■□ 3.48
PDCD2-209ENST00000542896 PPP1R1BQ9UD71 204 aaPredicted RBP36.8■■■■□ 3.48
PDCD2-209ENST00000542896 RGPD5Q99666 1765 aa36.8■■■■□ 3.48
PDCD2-209ENST00000542896 CD163L1Q9NR16 1453 aa36.8■■■■□ 3.48
PDCD2-209ENST00000542896 SLC12A5Q9H2X9 1139 aa36.79■■■■□ 3.48
PDCD2-209ENST00000542896 SBF2Q86WG5 1849 aa36.79■■■■□ 3.48
PDCD2-209ENST00000542896 RGPD3A6NKT7 1758 aaPredicted RBP36.78■■■■□ 3.48
PDCD2-209ENST00000542896 RGPD4Q7Z3J3 1758 aa36.78■■■■□ 3.48
PDCD2-209ENST00000542896 ANO8Q9HCE9 1232 aaPredicted RBP36.77■■■■□ 3.48
PDCD2-209ENST00000542896 NLRP2Q9NX02 1062 aa36.76■■■■□ 3.48
PDCD2-209ENST00000542896 TERF2IPQ9NYB0 399 aa36.75■■■■□ 3.47
PDCD2-209ENST00000542896 ERBB3P21860 1342 aa36.74■■■■□ 3.47
PDCD2-209ENST00000542896 TNS2Q63HR2 1409 aa36.74■■■■□ 3.47
PDCD2-209ENST00000542896 PROM2Q8N271 834 aa36.73■■■■□ 3.47
PDCD2-209ENST00000542896 EDC4Q6P2E9 1401 aaKnown RBP36.73■■■■□ 3.47
PDCD2-209ENST00000542896 PUS7Q96PZ0 661 aaKnown RBP36.7■■■■□ 3.47
PDCD2-209ENST00000542896 A0A1W2PP64 1363 aa36.69■■■■□ 3.46
PDCD2-209ENST00000542896 TXNRD1Q16881 649 aa36.69■■■■□ 3.46
PDCD2-209ENST00000542896 ANKRD24Q8TF21 1146 aa36.69■■■■□ 3.46
PDCD2-209ENST00000542896 USP54Q70EL1 1684 aa36.69■■■■□ 3.46
PDCD2-209ENST00000542896 IL2RBP14784 551 aa36.67■■■■□ 3.46
PDCD2-209ENST00000542896 STK32BQ9NY57 414 aa36.66■■■■□ 3.46
PDCD2-209ENST00000542896 ACSBG1Q96GR2 724 aa36.64■■■■□ 3.46
PDCD2-209ENST00000542896 NINLQ9Y2I6 1382 aa36.62■■■■□ 3.45
PDCD2-209ENST00000542896 PDGFDQ9GZP0 370 aaPredicted RBP36.61■■■■□ 3.45
PDCD2-209ENST00000542896 DCAF8L1A6NGE4 600 aa36.6■■■■□ 3.45
PDCD2-209ENST00000542896 LTN1O94822 1766 aa36.6■■■■□ 3.45
PDCD2-209ENST00000542896 ST20-MTHFSA0A0A6YYL1 179 aa36.59■■■■□ 3.45
PDCD2-209ENST00000542896 ZBTB7AO95365 584 aa36.59■■■■□ 3.45
PDCD2-209ENST00000542896 SLC15A2Q16348 729 aa36.59■■■■□ 3.45
PDCD2-209ENST00000542896 TESK2Q96S53 571 aa36.58■■■■□ 3.45
PDCD2-209ENST00000542896 IP6K1Q92551 441 aa36.57■■■■□ 3.44
PDCD2-209ENST00000542896 CASZ1Q86V15 1759 aa36.56■■■■□ 3.44
PDCD2-209ENST00000542896 SLC24A1O60721 1099 aa36.55■■■■□ 3.44
PDCD2-209ENST00000542896 LTV1Q96GA3 475 aaPredicted RBP36.54■■■■□ 3.44
PDCD2-209ENST00000542896 COG3Q96JB2 828 aa36.54■■■■□ 3.44
PDCD2-209ENST00000542896 NHSQ6T4R5 1651 aa36.54■■■■□ 3.44
PDCD2-209ENST00000542896 YY1P25490 414 aa36.53■■■■□ 3.44
PDCD2-209ENST00000542896 ATF5Q9Y2D1 282 aaPredicted RBP36.53■■■■□ 3.44
PDCD2-209ENST00000542896 PTGER2P43116 358 aa36.48■■■■□ 3.43
PDCD2-209ENST00000542896 MAP3K19Q56UN5 1328 aa36.46■■■■□ 3.43
PDCD2-209ENST00000542896 AMPHP49418 695 aa36.46■■■■□ 3.43
PDCD2-209ENST00000542896 DDX54Q8TDD1 881 aaKnown RBP36.46■■■■□ 3.43
PDCD2-209ENST00000542896 MTFR1LQ9H019 292 aa36.45■■■■□ 3.43
PDCD2-209ENST00000542896 HOXC9P31274 260 aa36.44■■■■□ 3.42
PDCD2-209ENST00000542896 ANKRD36BQ8N2N9 1353 aa36.42■■■■□ 3.42
PDCD2-209ENST00000542896 FBLN1P23142 703 aa36.42■■■■□ 3.42
PDCD2-209ENST00000542896 TMF1P82094 1093 aa36.4■■■■□ 3.42
PDCD2-209ENST00000542896 MYOM1P52179 1685 aa36.39■■■■□ 3.42
PDCD2-209ENST00000542896 BTAF1O14981 1849 aa36.38■■■■□ 3.41
PDCD2-209ENST00000542896 FAM208AQ9UK61 1670 aaKnown RBP36.38■■■■□ 3.41
PDCD2-209ENST00000542896 LRRC4BQ9NT99 713 aa36.36■■■■□ 3.41
PDCD2-209ENST00000542896 ZNF827Q17R98 1081 aa36.35■■■■□ 3.41
PDCD2-209ENST00000542896 SYTL4Q96C24 671 aaPredicted RBP36.35■■■■□ 3.41
PDCD2-209ENST00000542896 FHDC1Q9C0D6 1143 aaPredicted RBP36.35■■■■□ 3.41
PDCD2-209ENST00000542896 PAPPAQ13219 1627 aa36.34■■■■□ 3.41
PDCD2-209ENST00000542896 GGNBP2Q9H3C7 697 aa36.34■■■■□ 3.41
PDCD2-209ENST00000542896 USP47Q96K76 1375 aa36.34■■■■□ 3.41
PDCD2-209ENST00000542896 RRS1Q15050 365 aaKnown RBP36.33■■■■□ 3.41
PDCD2-209ENST00000542896 SGIP1Q9BQI5 828 aa36.33■■■■□ 3.41
PDCD2-209ENST00000542896 SYT17Q9BSW7 474 aa36.33■■■■□ 3.41
PDCD2-209ENST00000542896 RTL1A6NKG5 1358 aa36.32■■■■□ 3.4
PDCD2-209ENST00000542896 FYB1O15117 783 aa36.32■■■■□ 3.4
PDCD2-209ENST00000542896 TRIM26Q12899 539 aaPredicted RBP36.32■■■■□ 3.4
PDCD2-209ENST00000542896 SLC27A3Q5K4L6 730 aa36.32■■■■□ 3.4
PDCD2-209ENST00000542896 ZCRB1Q8TBF4 217 aaKnown RBP36.32■■■■□ 3.4
PDCD2-209ENST00000542896 PRIM1P49642 420 aaKnown RBP36.3■■■■□ 3.4
PDCD2-209ENST00000542896 KAT6BQ8WYB5 2073 aa36.28■■■■□ 3.4
PDCD2-209ENST00000542896 ARXQ96QS3 562 aa36.28■■■■□ 3.4
PDCD2-209ENST00000542896 CDCA8Q53HL2 280 aa36.27■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms