RNA–Protein interactions for RNA: ENST00000542687.1

MRPL40P1-201, Transcript of mitochondrial ribosomal protein L40 pseudogene 1, humanhuman

BASIC

Gene MRPL40P1, Length 604 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40P1-201ENST00000542687 NUTM2EB1AL46 878 aaPredicted RBP10.68□□□□□ -0.7
MRPL40P1-201ENST00000542687 CHRNA2Q15822 529 aa10.68□□□□□ -0.7
MRPL40P1-201ENST00000542687 NUTM2AQ8IVF1 878 aaPredicted RBP10.68□□□□□ -0.7
MRPL40P1-201ENST00000542687 LTV1Q96GA3 475 aaPredicted RBP10.68□□□□□ -0.7
MRPL40P1-201ENST00000542687 PNNQ9H307 717 aaKnown RBP10.68□□□□□ -0.7
MRPL40P1-201ENST00000542687 CDK12Q9NYV4 1490 aaPredicted RBP10.68□□□□□ -0.7
MRPL40P1-201ENST00000542687 COL16A1Q07092 1604 aaPredicted RBP10.67□□□□□ -0.7
MRPL40P1-201ENST00000542687 YTHDC1Q96MU7 727 aaKnown RBP10.67□□□□□ -0.7
MRPL40P1-201ENST00000542687 NFAT5O94916 1531 aa10.67□□□□□ -0.7
MRPL40P1-201ENST00000542687 ALS2Q96Q42 1657 aa10.66□□□□□ -0.7
MRPL40P1-201ENST00000542687 FAM83GA6ND36 823 aa10.66□□□□□ -0.7
MRPL40P1-201ENST00000542687 ADAMTS2O95450 1211 aa10.66□□□□□ -0.7
MRPL40P1-201ENST00000542687 ANKRD24Q8TF21 1146 aa10.66□□□□□ -0.7
MRPL40P1-201ENST00000542687 AXIN2Q9Y2T1 843 aa10.66□□□□□ -0.7
MRPL40P1-201ENST00000542687 ANKRD26Q9UPS8 1709 aa10.66□□□□□ -0.7
MRPL40P1-201ENST00000542687 SPATA31A6Q5VVP1 1343 aa10.65□□□□□ -0.7
MRPL40P1-201ENST00000542687 FCHSD2O94868 740 aa10.65□□□□□ -0.7
MRPL40P1-201ENST00000542687 NEFMP07197 916 aa10.65□□□□□ -0.7
MRPL40P1-201ENST00000542687 CSB-PGBD3P0DP91 1061 aa10.65□□□□□ -0.7
MRPL40P1-201ENST00000542687 EVA1CP58658 441 aa10.65□□□□□ -0.7
MRPL40P1-201ENST00000542687 USP54Q70EL1 1684 aa10.64□□□□□ -0.71
MRPL40P1-201ENST00000542687 COL3A1P02461 1466 aaPredicted RBP10.64□□□□□ -0.71
MRPL40P1-201ENST00000542687 HMOX1P09601 288 aa10.64□□□□□ -0.71
MRPL40P1-201ENST00000542687 SULT6B1Q6IMI4 303 aa10.64□□□□□ -0.71
MRPL40P1-201ENST00000542687 CCDC146Q8IYE0 955 aa10.64□□□□□ -0.71
MRPL40P1-201ENST00000542687 RUNDC1Q96C34 613 aa10.64□□□□□ -0.71
MRPL40P1-201ENST00000542687 EYA1Q99502 592 aa10.64□□□□□ -0.71
MRPL40P1-201ENST00000542687 BLMP54132 1417 aaPredicted RBP10.64□□□□□ -0.71
MRPL40P1-201ENST00000542687 HNRNPUQ00839 825 aaKnown RBP eCLIP10.63□□□□□ -0.71
MRPL40P1-201ENST00000542687 NBPF6Q5VWK0 638 aa10.63□□□□□ -0.71
MRPL40P1-201ENST00000542687 NBPF4Q96M43 638 aa10.63□□□□□ -0.71
MRPL40P1-201ENST00000542687 NLRP2Q9NX02 1062 aa10.63□□□□□ -0.71
MRPL40P1-201ENST00000542687 SHPRHQ149N8 1683 aa10.63□□□□□ -0.71
MRPL40P1-201ENST00000542687 ERBB3P21860 1342 aa10.62□□□□□ -0.71
MRPL40P1-201ENST00000542687 RSPH6AQ9H0K4 717 aa10.62□□□□□ -0.71
MRPL40P1-201ENST00000542687 STRN4Q9NRL3 753 aa10.62□□□□□ -0.71
MRPL40P1-201ENST00000542687 BTG4Q9NY30 223 aa10.62□□□□□ -0.71
MRPL40P1-201ENST00000542687 RGS17Q9UGC6 210 aaPredicted RBP10.62□□□□□ -0.71
MRPL40P1-201ENST00000542687 IGSF1Q8N6C5 1336 aa10.61□□□□□ -0.71
MRPL40P1-201ENST00000542687 MAPK8IP3Q9UPT6 1336 aa10.61□□□□□ -0.71
MRPL40P1-201ENST00000542687 PRKAR2BP31323 418 aa10.61□□□□□ -0.71
MRPL40P1-201ENST00000542687 MEX3CQ5U5Q3 659 aaKnown RBP10.61□□□□□ -0.71
MRPL40P1-201ENST00000542687 TOM1L2Q6ZVM7 507 aa10.61□□□□□ -0.71
MRPL40P1-201ENST00000542687 AEBP1Q8IUX7 1158 aa10.61□□□□□ -0.71
MRPL40P1-201ENST00000542687 NGLY1Q96IV0 654 aa10.61□□□□□ -0.71
MRPL40P1-201ENST00000542687 LRP6O75581 1613 aa10.6□□□□□ -0.71
MRPL40P1-201ENST00000542687 APAF1O14727 1248 aa10.6□□□□□ -0.71
MRPL40P1-201ENST00000542687 USHBP1Q8N6Y0 703 aa10.6□□□□□ -0.71
MRPL40P1-201ENST00000542687 C8orf37Q96NL8 207 aa10.6□□□□□ -0.71
MRPL40P1-201ENST00000542687 PLEKHF1Q96S99 279 aa10.6□□□□□ -0.71
MRPL40P1-201ENST00000542687 MARF1Q9Y4F3 1742 aaKnown RBP10.6□□□□□ -0.71
MRPL40P1-201ENST00000542687 WDR17Q8IZU2 1322 aa10.59□□□□□ -0.71
MRPL40P1-201ENST00000542687 LARP1Q6PKG0 1096 aaKnown RBP10.59□□□□□ -0.71
MRPL40P1-201ENST00000542687 TCP11L2Q8N4U5 519 aa10.59□□□□□ -0.71
MRPL40P1-201ENST00000542687 NGEFQ8N5V2 710 aa10.59□□□□□ -0.71
MRPL40P1-201ENST00000542687 ABCC6O95255 1503 aa10.58□□□□□ -0.72
MRPL40P1-201ENST00000542687 COL22A1Q8NFW1 1626 aaPredicted RBP10.58□□□□□ -0.72
MRPL40P1-201ENST00000542687 PEAK1Q9H792 1746 aa10.58□□□□□ -0.72
MRPL40P1-201ENST00000542687 SENP3-EIF4A1A0A087X0R7 540 aa10.58□□□□□ -0.72
MRPL40P1-201ENST00000542687 POTEAQ6S8J7 498 aa10.58□□□□□ -0.72
MRPL40P1-201ENST00000542687 RAPGEF4Q8WZA2 1011 aa10.58□□□□□ -0.72
MRPL40P1-201ENST00000542687 PHACTR3Q96KR7 559 aa10.58□□□□□ -0.72
MRPL40P1-201ENST00000542687 CARD10Q9BWT7 1032 aa10.58□□□□□ -0.72
MRPL40P1-201ENST00000542687 SALL2Q9Y467 1007 aaPredicted RBP10.58□□□□□ -0.72
MRPL40P1-201ENST00000542687 PHRF1Q9P1Y6 1649 aaKnown RBP10.58□□□□□ -0.72
MRPL40P1-201ENST00000542687 KDRP35968 1356 aa10.57□□□□□ -0.72
MRPL40P1-201ENST00000542687 MAP2P11137 1827 aaKnown RBP10.57□□□□□ -0.72
MRPL40P1-201ENST00000542687 NEUROD2Q15784 382 aa10.57□□□□□ -0.72
MRPL40P1-201ENST00000542687 PLEKHO1Q53GL0 409 aaPredicted RBP10.57□□□□□ -0.72
MRPL40P1-201ENST00000542687 UNC5CLQ8IV45 518 aa10.57□□□□□ -0.72
MRPL40P1-201ENST00000542687 RRP7AQ9Y3A4 280 aaKnown RBP10.57□□□□□ -0.72
MRPL40P1-201ENST00000542687 CAMTA1Q9Y6Y1 1673 aa10.57□□□□□ -0.72
MRPL40P1-201ENST00000542687 COL5A2P05997 1499 aaPredicted RBP10.56□□□□□ -0.72
MRPL40P1-201ENST00000542687 TATP17735 454 aaPredicted RBP10.56□□□□□ -0.72
MRPL40P1-201ENST00000542687 TMPOP42166 694 aaKnown RBP10.56□□□□□ -0.72
MRPL40P1-201ENST00000542687 RIPK4P57078 832 aa10.56□□□□□ -0.72
MRPL40P1-201ENST00000542687 NFE2L2Q16236 605 aa10.56□□□□□ -0.72
MRPL40P1-201ENST00000542687 NCBP3Q53F19 620 aaKnown RBP10.56□□□□□ -0.72
MRPL40P1-201ENST00000542687 FNBP4Q8N3X1 1017 aaPredicted RBP10.56□□□□□ -0.72
MRPL40P1-201ENST00000542687 USP35Q9P2H5 1018 aa10.56□□□□□ -0.72
MRPL40P1-201ENST00000542687 AMOTQ4VCS5 1084 aa10.55□□□□□ -0.72
MRPL40P1-201ENST00000542687 GAS2L2Q8NHY3 880 aa10.55□□□□□ -0.72
MRPL40P1-201ENST00000542687 USP21Q9UK80 565 aa10.55□□□□□ -0.72
MRPL40P1-201ENST00000542687 CCDC9Q9Y3X0 531 aaKnown RBP10.55□□□□□ -0.72
MRPL40P1-201ENST00000542687 ZBED9Q6R2W3 1325 aa10.55□□□□□ -0.72
MRPL40P1-201ENST00000542687 IL2RBP14784 551 aa10.54□□□□□ -0.72
MRPL40P1-201ENST00000542687 CRB1P82279 1406 aa10.54□□□□□ -0.72
MRPL40P1-201ENST00000542687 LMOD3Q0VAK6 560 aa10.54□□□□□ -0.72
MRPL40P1-201ENST00000542687 MTHFSDQ2M296 383 aaKnown RBP10.54□□□□□ -0.72
MRPL40P1-201ENST00000542687 ZNF772Q68DY9 489 aaPredicted RBP10.54□□□□□ -0.72
MRPL40P1-201ENST00000542687 SPG7Q9UQ90 795 aa10.54□□□□□ -0.72
MRPL40P1-201ENST00000542687 CRYBG1Q9Y4K1 1723 aa10.54□□□□□ -0.72
MRPL40P1-201ENST00000542687 VPS72Q15906 364 aa10.53□□□□□ -0.72
MRPL40P1-201ENST00000542687 CCDC27Q2M243 656 aa10.53□□□□□ -0.72
MRPL40P1-201ENST00000542687 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.53□□□□□ -0.72
MRPL40P1-201ENST00000542687 THRAP3Q9Y2W1 955 aaKnown RBP10.53□□□□□ -0.72
MRPL40P1-201ENST00000542687 AFF2P51816 1311 aa10.53□□□□□ -0.72
MRPL40P1-201ENST00000542687 SLIT2O94813 1529 aa10.53□□□□□ -0.72
MRPL40P1-201ENST00000542687 LTN1O94822 1766 aa10.52□□□□□ -0.72
MRPL40P1-201ENST00000542687 COL14A1Q05707 1796 aaKnown RBP10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms