RNA–Protein interactions for RNA: ENST00000542484.1

C2CD3-218, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-218ENST00000542484 VASH1Q7L8A9 365 aaPredicted RBP8.43□□□□□ -1.06
C2CD3-218ENST00000542484 KCTD15Q96SI1 283 aaPredicted RBP8.43□□□□□ -1.06
C2CD3-218ENST00000542484 PPP1R12CQ9BZL4 782 aa8.43□□□□□ -1.06
C2CD3-218ENST00000542484 CHIC2Q9UKJ5 165 aa8.43□□□□□ -1.06
C2CD3-218ENST00000542484 PIK3CDO00329 1044 aa8.42□□□□□ -1.06
C2CD3-218ENST00000542484 GIGYF1O75420 1035 aaPredicted RBP8.42□□□□□ -1.06
C2CD3-218ENST00000542484 PRR20EP86478 221 aa8.42□□□□□ -1.06
C2CD3-218ENST00000542484 PRR20CP86479 221 aa8.42□□□□□ -1.06
C2CD3-218ENST00000542484 PRR20DP86480 221 aa8.42□□□□□ -1.06
C2CD3-218ENST00000542484 PRR20BP86481 221 aa8.42□□□□□ -1.06
C2CD3-218ENST00000542484 PRR20AP86496 221 aa8.42□□□□□ -1.06
C2CD3-218ENST00000542484 FOXC1Q12948 553 aa8.42□□□□□ -1.06
C2CD3-218ENST00000542484 RNF20Q5VTR2 975 aa8.42□□□□□ -1.06
C2CD3-218ENST00000542484 CCDC125Q86Z20 511 aa8.42□□□□□ -1.06
C2CD3-218ENST00000542484 PALM3A6NDB9 673 aaPredicted RBP8.41□□□□□ -1.06
C2CD3-218ENST00000542484 ADH1CP00326 375 aa8.41□□□□□ -1.06
C2CD3-218ENST00000542484 GRM5P41594 1212 aa8.41□□□□□ -1.06
C2CD3-218ENST00000542484 TBC1D9Q6ZT07 1266 aa8.41□□□□□ -1.06
C2CD3-218ENST00000542484 TRIM67Q6ZTA4 783 aa8.41□□□□□ -1.06
C2CD3-218ENST00000542484 RNF135Q8IUD6 432 aa8.41□□□□□ -1.06
C2CD3-218ENST00000542484 ATP9BO43861 1147 aa8.4□□□□□ -1.06
C2CD3-218ENST00000542484 ARID5BQ14865 1188 aa8.4□□□□□ -1.06
C2CD3-218ENST00000542484 INTS6LQ5JSJ4 861 aaKnown RBP8.4□□□□□ -1.06
C2CD3-218ENST00000542484 CFAP70Q5T0N1 1121 aa8.4□□□□□ -1.06
C2CD3-218ENST00000542484 SNIP1Q8TAD8 396 aaKnown RBP8.4□□□□□ -1.06
C2CD3-218ENST00000542484 FSHRP23945 695 aa8.39□□□□□ -1.07
C2CD3-218ENST00000542484 NR5A1Q13285 461 aa8.39□□□□□ -1.07
C2CD3-218ENST00000542484 ARID3AQ99856 593 aa8.39□□□□□ -1.07
C2CD3-218ENST00000542484 TOR4AQ9NXH8 423 aa8.39□□□□□ -1.07
C2CD3-218ENST00000542484 TFIP11Q9UBB9 837 aaKnown RBP8.39□□□□□ -1.07
C2CD3-218ENST00000542484 MAFBQ9Y5Q3 323 aaPredicted RBP8.39□□□□□ -1.07
C2CD3-218ENST00000542484 USP17L5A8MUK1 530 aa8.38□□□□□ -1.07
C2CD3-218ENST00000542484 TNFRSF10AO00220 468 aa8.38□□□□□ -1.07
C2CD3-218ENST00000542484 SKIP12755 728 aa8.38□□□□□ -1.07
C2CD3-218ENST00000542484 MAP7D1Q3KQU3 841 aa8.38□□□□□ -1.07
C2CD3-218ENST00000542484 TRAF7Q6Q0C0 670 aa8.38□□□□□ -1.07
C2CD3-218ENST00000542484 PLEKHM2Q8IWE5 1019 aa8.38□□□□□ -1.07
C2CD3-218ENST00000542484 PLPP7Q8NBV4 271 aa8.38□□□□□ -1.07
C2CD3-218ENST00000542484 CCDC85AQ96PX6 553 aaPredicted RBP8.38□□□□□ -1.07
C2CD3-218ENST00000542484 ALDH1A1P00352 501 aa8.37□□□□□ -1.07
C2CD3-218ENST00000542484 USP17L3A6NCW0 530 aa8.36□□□□□ -1.07
C2CD3-218ENST00000542484 USP17L4A6NCW7 530 aa8.36□□□□□ -1.07
C2CD3-218ENST00000542484 LZTS3O60299 673 aaPredicted RBP8.36□□□□□ -1.07
C2CD3-218ENST00000542484 DHX9Q08211 1270 aaKnown RBP8.36□□□□□ -1.07
C2CD3-218ENST00000542484 USP17L2Q6R6M4 530 aa8.36□□□□□ -1.07
C2CD3-218ENST00000542484 USP17L1Q7RTZ2 530 aa8.36□□□□□ -1.07
C2CD3-218ENST00000542484 CYP4X1Q8N118 509 aa8.36□□□□□ -1.07
C2CD3-218ENST00000542484 DOLKQ9UPQ8 538 aa8.36□□□□□ -1.07
C2CD3-218ENST00000542484 TTC24A2A3L6 582 aaPredicted RBP8.35□□□□□ -1.07
C2CD3-218ENST00000542484 ERVH48-1M5A8F1 160 aa8.35□□□□□ -1.07
C2CD3-218ENST00000542484 LMOD1P29536 600 aaPredicted RBP8.35□□□□□ -1.07
C2CD3-218ENST00000542484 TSGA10IPQ3SY00 556 aa8.35□□□□□ -1.07
C2CD3-218ENST00000542484 CCDC116Q8IYX3 515 aa8.35□□□□□ -1.07
C2CD3-218ENST00000542484 J3QL48 77 aa8.34□□□□□ -1.07
C2CD3-218ENST00000542484 NR3C2P08235 984 aa8.34□□□□□ -1.07
C2CD3-218ENST00000542484 RAB15P59190 212 aa8.34□□□□□ -1.07
C2CD3-218ENST00000542484 SRPK2P78362 688 aaKnown RBP8.34□□□□□ -1.07
C2CD3-218ENST00000542484 PCDHB11Q9Y5F2 797 aa8.34□□□□□ -1.07
C2CD3-218ENST00000542484 WASF2Q9Y6W5 498 aa8.34□□□□□ -1.07
C2CD3-218ENST00000542484 SMPD1P17405 629 aa8.33□□□□□ -1.08
C2CD3-218ENST00000542484 NNTQ13423 1086 aa8.33□□□□□ -1.08
C2CD3-218ENST00000542484 NCOA4Q13772 614 aa8.33□□□□□ -1.08
C2CD3-218ENST00000542484 TRIM52Q96A61 297 aa8.33□□□□□ -1.08
C2CD3-218ENST00000542484 PBXIP1Q96AQ6 731 aa8.33□□□□□ -1.08
C2CD3-218ENST00000542484 PDZRN3Q9UPQ7 1066 aa8.33□□□□□ -1.08
C2CD3-218ENST00000542484 PPP1R15AO75807 674 aaPredicted RBP8.32□□□□□ -1.08
C2CD3-218ENST00000542484 EML3Q32P44 896 aa8.32□□□□□ -1.08
C2CD3-218ENST00000542484 PPP1R26Q5T8A7 1209 aaPredicted RBP8.32□□□□□ -1.08
C2CD3-218ENST00000542484 DEPDC4Q8N2C3 294 aa8.32□□□□□ -1.08
C2CD3-218ENST00000542484 CDCA7Q9BWT1 371 aaPredicted RBP8.32□□□□□ -1.08
C2CD3-218ENST00000542484 EMILIN1Q9Y6C2 1016 aa8.32□□□□□ -1.08
C2CD3-218ENST00000542484 RFX1P22670 979 aa8.31□□□□□ -1.08
C2CD3-218ENST00000542484 ERVK-9P63128 1117 aa8.31□□□□□ -1.08
C2CD3-218ENST00000542484 OXLD1Q5BKU9 147 aa8.31□□□□□ -1.08
C2CD3-218ENST00000542484 KANK4Q5T7N3 995 aaPredicted RBP8.31□□□□□ -1.08
C2CD3-218ENST00000542484 TMPRSS4Q9NRS4 437 aa8.31□□□□□ -1.08
C2CD3-218ENST00000542484 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.3□□□□□ -1.08
C2CD3-218ENST00000542484 USP4Q13107 963 aa8.3□□□□□ -1.08
C2CD3-218ENST00000542484 ZNF784Q8NCA9 323 aaPredicted RBP8.3□□□□□ -1.08
C2CD3-218ENST00000542484 SIRT1Q96EB6 747 aa8.3□□□□□ -1.08
C2CD3-218ENST00000542484 KLF16Q9BXK1 252 aaPredicted RBP8.3□□□□□ -1.08
C2CD3-218ENST00000542484 PGPEP1Q9NXJ5 209 aa8.3□□□□□ -1.08
C2CD3-218ENST00000542484 ATP5J2-PTCD1G3V325 749 aa8.29□□□□□ -1.08
C2CD3-218ENST00000542484 SCTRP47872 440 aa8.29□□□□□ -1.08
C2CD3-218ENST00000542484 CC2D2BQ6DHV5 1058 aa8.29□□□□□ -1.08
C2CD3-218ENST00000542484 NOD1Q9Y239 953 aa8.29□□□□□ -1.08
C2CD3-218ENST00000542484 LILRA1O75019 489 aa8.28□□□□□ -1.08
C2CD3-218ENST00000542484 MYCP01106 439 aaPredicted RBP8.28□□□□□ -1.08
C2CD3-218ENST00000542484 MYT1Q01538 1121 aa8.28□□□□□ -1.08
C2CD3-218ENST00000542484 TRIM50Q86XT4 487 aa8.28□□□□□ -1.08
C2CD3-218ENST00000542484 VRTNQ9H8Y1 702 aa8.28□□□□□ -1.08
C2CD3-218ENST00000542484 MKRN1Q9UHC7 482 aaKnown RBP8.28□□□□□ -1.08
C2CD3-218ENST00000542484 NRG2O14511 850 aaPredicted RBP8.27□□□□□ -1.09
C2CD3-218ENST00000542484 TIMP2P16035 220 aa8.27□□□□□ -1.09
C2CD3-218ENST00000542484 HPS1Q92902 700 aa8.27□□□□□ -1.09
C2CD3-218ENST00000542484 CYLDQ9NQC7 956 aa8.27□□□□□ -1.09
C2CD3-218ENST00000542484 FAM196BA6NMK8 535 aa8.26□□□□□ -1.09
C2CD3-218ENST00000542484 ATG7O95352 703 aa8.26□□□□□ -1.09
C2CD3-218ENST00000542484 ZIC2O95409 532 aaPredicted RBP8.26□□□□□ -1.09
C2CD3-218ENST00000542484 WDR4P57081 412 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms