RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 LARP1Q6PKG0 1096 aaKnown RBP16.11■□□□□ 0.17
C2CD3-217ENST00000542452 AXIN2Q9Y2T1 843 aa16.11■□□□□ 0.17
C2CD3-217ENST00000542452 LRRC37A3O60309 1634 aa16.1■□□□□ 0.17
C2CD3-217ENST00000542452 NSD3Q9BZ95 1437 aa16.1■□□□□ 0.17
C2CD3-217ENST00000542452 EP400Q96L91 3159 aa16.1■□□□□ 0.17
C2CD3-217ENST00000542452 CDCA8Q53HL2 280 aa16.09■□□□□ 0.17
C2CD3-217ENST00000542452 KCNH5Q8NCM2 988 aa16.09■□□□□ 0.17
C2CD3-217ENST00000542452 CRB1P82279 1406 aa16.09■□□□□ 0.17
C2CD3-217ENST00000542452 ANKRD26Q9UPS8 1709 aa16.08■□□□□ 0.17
C2CD3-217ENST00000542452 C11orf95C9JLR9 678 aaPredicted RBP16.08■□□□□ 0.16
C2CD3-217ENST00000542452 CARD14Q9BXL6 1004 aa16.07■□□□□ 0.16
C2CD3-217ENST00000542452 PEAK1Q9H792 1746 aa16.07■□□□□ 0.16
C2CD3-217ENST00000542452 TNS1Q9HBL0 1735 aaKnown RBP16.06■□□□□ 0.16
C2CD3-217ENST00000542452 WDR17Q8IZU2 1322 aa16.05■□□□□ 0.16
C2CD3-217ENST00000542452 USP35Q9P2H5 1018 aa16.05■□□□□ 0.16
C2CD3-217ENST00000542452 RGPD2P0DJD1 1756 aa16.05■□□□□ 0.16
C2CD3-217ENST00000542452 A0A0G2JS52 829 aa16.04■□□□□ 0.16
C2CD3-217ENST00000542452 FYB1O15117 783 aa16.04■□□□□ 0.16
C2CD3-217ENST00000542452 FBLN1P23142 703 aa16.04■□□□□ 0.16
C2CD3-217ENST00000542452 EVA1CP58658 441 aa16.04■□□□□ 0.16
C2CD3-217ENST00000542452 MYT1Q01538 1121 aa16.04■□□□□ 0.16
C2CD3-217ENST00000542452 KRT27Q7Z3Y8 459 aa16.04■□□□□ 0.16
C2CD3-217ENST00000542452 GGNBP2Q9H3C7 697 aa16.04■□□□□ 0.16
C2CD3-217ENST00000542452 FAM208AQ9UK61 1670 aaKnown RBP16.04■□□□□ 0.16
C2CD3-217ENST00000542452 DISP2A7MBM2 1401 aa16.03■□□□□ 0.16
C2CD3-217ENST00000542452 BARGINQ6ZT62 677 aa16.03■□□□□ 0.16
C2CD3-217ENST00000542452 POLR3GLQ9BT43 218 aa16.03■□□□□ 0.16
C2CD3-217ENST00000542452 RGPD1P0DJD0 1748 aa16.02■□□□□ 0.16
C2CD3-217ENST00000542452 TCP11L2Q8N4U5 519 aa16.02■□□□□ 0.16
C2CD3-217ENST00000542452 COG3Q96JB2 828 aa16.02■□□□□ 0.16
C2CD3-217ENST00000542452 ERBB3P21860 1342 aa16.01■□□□□ 0.15
C2CD3-217ENST00000542452 MAP3K19Q56UN5 1328 aa16.01■□□□□ 0.15
C2CD3-217ENST00000542452 FAM182BQ5T319 152 aa16.01■□□□□ 0.15
C2CD3-217ENST00000542452 BLMP54132 1417 aaPredicted RBP16.01■□□□□ 0.15
C2CD3-217ENST00000542452 KIF7Q2M1P5 1343 aa16■□□□□ 0.15
C2CD3-217ENST00000542452 TOM1L2Q6ZVM7 507 aa16■□□□□ 0.15
C2CD3-217ENST00000542452 THRAP3Q9Y2W1 955 aaKnown RBP15.99■□□□□ 0.15
C2CD3-217ENST00000542452 RRS1Q15050 365 aaKnown RBP15.98■□□□□ 0.15
C2CD3-217ENST00000542452 MAP2P11137 1827 aaKnown RBP15.98■□□□□ 0.15
C2CD3-217ENST00000542452 SBF2Q86WG5 1849 aa15.98■□□□□ 0.15
C2CD3-217ENST00000542452 RTL1A6NKG5 1358 aa15.98■□□□□ 0.15
C2CD3-217ENST00000542452 ANKRD24Q8TF21 1146 aa15.97■□□□□ 0.15
C2CD3-217ENST00000542452 IP6K1Q92551 441 aa15.97■□□□□ 0.15
C2CD3-217ENST00000542452 CARD10Q9BWT7 1032 aa15.97■□□□□ 0.15
C2CD3-217ENST00000542452 SHANK3Q9BYB0 1731 aa15.97■□□□□ 0.15
C2CD3-217ENST00000542452 CSB-PGBD3P0DP91 1061 aa15.96■□□□□ 0.15
C2CD3-217ENST00000542452 HOXC9P31274 260 aa15.96■□□□□ 0.15
C2CD3-217ENST00000542452 CCDC7Q96M83 1385 aa15.96■□□□□ 0.15
C2CD3-217ENST00000542452 PANK3Q9H999 370 aa15.95■□□□□ 0.14
C2CD3-217ENST00000542452 TNS2Q63HR2 1409 aa15.94■□□□□ 0.14
C2CD3-217ENST00000542452 CGNL1Q0VF96 1302 aa15.94■□□□□ 0.14
C2CD3-217ENST00000542452 DEFB132Q7Z7B7 95 aa15.93■□□□□ 0.14
C2CD3-217ENST00000542452 LTV1Q96GA3 475 aaPredicted RBP15.92■□□□□ 0.14
C2CD3-217ENST00000542452 EMILIN1Q9Y6C2 1016 aa15.92■□□□□ 0.14
C2CD3-217ENST00000542452 OVOS2A0A0G2JMS6 1433 aa15.92■□□□□ 0.14
C2CD3-217ENST00000542452 RREB1Q92766 1687 aa15.92■□□□□ 0.14
C2CD3-217ENST00000542452 WASHC2AQ641Q2 1341 aa15.92■□□□□ 0.14
C2CD3-217ENST00000542452 FLT4P35916 1363 aa15.91■□□□□ 0.14
C2CD3-217ENST00000542452 MEGF6O75095 1541 aa15.91■□□□□ 0.14
C2CD3-217ENST00000542452 AMPHP49418 695 aa15.91■□□□□ 0.14
C2CD3-217ENST00000542452 NLRP2Q9NX02 1062 aa15.91■□□□□ 0.14
C2CD3-217ENST00000542452 PDE3BQ13370 1112 aa15.9■□□□□ 0.14
C2CD3-217ENST00000542452 CCDC125Q86Z20 511 aa15.9■□□□□ 0.14
C2CD3-217ENST00000542452 SMG6Q86US8 1419 aaKnown RBP15.9■□□□□ 0.14
C2CD3-217ENST00000542452 NSD2O96028 1365 aa15.89■□□□□ 0.13
C2CD3-217ENST00000542452 INSRP06213 1382 aa15.89■□□□□ 0.13
C2CD3-217ENST00000542452 KIF24Q5T7B8 1368 aa15.89■□□□□ 0.13
C2CD3-217ENST00000542452 DDB1Q16531 1140 aa15.89■□□□□ 0.13
C2CD3-217ENST00000542452 MARCH10Q8NA82 808 aaPredicted RBP15.89■□□□□ 0.13
C2CD3-217ENST00000542452 NHSQ6T4R5 1651 aa15.89■□□□□ 0.13
C2CD3-217ENST00000542452 HSP90AB2PQ58FF8 381 aa15.88■□□□□ 0.13
C2CD3-217ENST00000542452 FAM196AQ6ZSG2 479 aa15.88■□□□□ 0.13
C2CD3-217ENST00000542452 CDCA7Q9BWT1 371 aaPredicted RBP15.88■□□□□ 0.13
C2CD3-217ENST00000542452 NUP188Q5SRE5 1749 aa15.88■□□□□ 0.13
C2CD3-217ENST00000542452 RGPD3A6NKT7 1758 aaPredicted RBP15.87■□□□□ 0.13
C2CD3-217ENST00000542452 RGPD4Q7Z3J3 1758 aa15.87■□□□□ 0.13
C2CD3-217ENST00000542452 NCAPD2Q15021 1401 aa15.87■□□□□ 0.13
C2CD3-217ENST00000542452 TRIM37O94972 964 aa15.87■□□□□ 0.13
C2CD3-217ENST00000542452 BCL9O00512 1426 aa15.86■□□□□ 0.13
C2CD3-217ENST00000542452 IL2RBP14784 551 aa15.86■□□□□ 0.13
C2CD3-217ENST00000542452 AMER1Q5JTC6 1135 aaPredicted RBP15.86■□□□□ 0.13
C2CD3-217ENST00000542452 NBPF6Q5VWK0 638 aa15.86■□□□□ 0.13
C2CD3-217ENST00000542452 USHBP1Q8N6Y0 703 aa15.86■□□□□ 0.13
C2CD3-217ENST00000542452 NBPF4Q96M43 638 aa15.86■□□□□ 0.13
C2CD3-217ENST00000542452 POLKQ9UBT6 870 aa15.86■□□□□ 0.13
C2CD3-217ENST00000542452 PKD1L3Q7Z443 1732 aa15.85■□□□□ 0.13
C2CD3-217ENST00000542452 DOT1LQ8TEK3 1739 aa15.85■□□□□ 0.13
C2CD3-217ENST00000542452 PER1O15534 1290 aaPredicted RBP15.84■□□□□ 0.13
C2CD3-217ENST00000542452 TNNT2P45379 298 aaPredicted RBP15.84■□□□□ 0.13
C2CD3-217ENST00000542452 EN1Q05925 392 aaPredicted RBP15.84■□□□□ 0.13
C2CD3-217ENST00000542452 SF3B2Q13435 895 aaKnown RBP15.84■□□□□ 0.13
C2CD3-217ENST00000542452 PTF1AQ7RTS3 328 aa15.84■□□□□ 0.13
C2CD3-217ENST00000542452 BTAF1O14981 1849 aa15.82■□□□□ 0.12
C2CD3-217ENST00000542452 EXOC5O00471 708 aa15.82■□□□□ 0.12
C2CD3-217ENST00000542452 BAG6P46379 1132 aa15.82■□□□□ 0.12
C2CD3-217ENST00000542452 KNSTRNQ9Y448 316 aa15.82■□□□□ 0.12
C2CD3-217ENST00000542452 PPM1GO15355 546 aaPredicted RBP15.81■□□□□ 0.12
C2CD3-217ENST00000542452 EZH2Q15910 746 aaKnown RBP15.81■□□□□ 0.12
C2CD3-217ENST00000542452 TOGARAM1Q9Y4F4 1720 aa15.81■□□□□ 0.12
C2CD3-217ENST00000542452 CAMKK2Q96RR4 588 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms