RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 MON2Q7Z3U7 1717 aa28.3■■■□□ 2.12
DDX11-220ENST00000542244 LRRC37A3O60309 1634 aa28.3■■■□□ 2.12
DDX11-220ENST00000542244 TTC21AQ8NDW8 1320 aa28.3■■■□□ 2.12
DDX11-220ENST00000542244 NME9Q86XW9 330 aa28.3■■■□□ 2.12
DDX11-220ENST00000542244 SLC12A5Q9H2X9 1139 aa28.3■■■□□ 2.12
DDX11-220ENST00000542244 LRP5O75197 1615 aa28.29■■■□□ 2.12
DDX11-220ENST00000542244 WDR17Q8IZU2 1322 aa28.29■■■□□ 2.12
DDX11-220ENST00000542244 PEAK1Q9H792 1746 aa28.29■■■□□ 2.12
DDX11-220ENST00000542244 TMC1Q8TDI8 760 aa28.27■■■□□ 2.12
DDX11-220ENST00000542244 KCNH5Q8NCM2 988 aa28.26■■■□□ 2.11
DDX11-220ENST00000542244 RREB1Q92766 1687 aa28.24■■■□□ 2.11
DDX11-220ENST00000542244 MARCH10Q8NA82 808 aaPredicted RBP28.24■■■□□ 2.11
DDX11-220ENST00000542244 NUP188Q5SRE5 1749 aa28.23■■■□□ 2.11
DDX11-220ENST00000542244 USP31Q70CQ4 1352 aa28.23■■■□□ 2.11
DDX11-220ENST00000542244 WNK3Q9BYP7 1800 aa28.22■■■□□ 2.11
DDX11-220ENST00000542244 DDB1Q16531 1140 aa28.22■■■□□ 2.11
DDX11-220ENST00000542244 TESK2Q96S53 571 aa28.22■■■□□ 2.11
DDX11-220ENST00000542244 OVOS2A0A0G2JMS6 1433 aa28.2■■■□□ 2.11
DDX11-220ENST00000542244 OVOS2A0A0J9YW53 1432 aa28.2■■■□□ 2.11
DDX11-220ENST00000542244 OVOS2Q6IE36 1432 aa28.2■■■□□ 2.11
DDX11-220ENST00000542244 CSB-PGBD3P0DP91 1061 aa28.2■■■□□ 2.1
DDX11-220ENST00000542244 A0A1W2PP64 1363 aa28.2■■■□□ 2.1
DDX11-220ENST00000542244 ST20-MTHFSA0A0A6YYL1 179 aa28.19■■■□□ 2.1
DDX11-220ENST00000542244 CARD10Q9BWT7 1032 aa28.19■■■□□ 2.1
DDX11-220ENST00000542244 PARD3Q8TEW0 1356 aa28.18■■■□□ 2.1
DDX11-220ENST00000542244 USP54Q70EL1 1684 aa28.17■■■□□ 2.1
DDX11-220ENST00000542244 SBF2Q86WG5 1849 aa28.17■■■□□ 2.1
DDX11-220ENST00000542244 TRIM26Q12899 539 aaPredicted RBP28.16■■■□□ 2.1
DDX11-220ENST00000542244 HDGFL2Q7Z4V5 671 aaPredicted RBP28.15■■■□□ 2.1
DDX11-220ENST00000542244 EDC4Q6P2E9 1401 aaKnown RBP28.14■■■□□ 2.1
DDX11-220ENST00000542244 FBLN1P23142 703 aa28.11■■■□□ 2.09
DDX11-220ENST00000542244 PROM2Q8N271 834 aa28.11■■■□□ 2.09
DDX11-220ENST00000542244 ERBB3P21860 1342 aa28.11■■■□□ 2.09
DDX11-220ENST00000542244 LTN1O94822 1766 aa28.1■■■□□ 2.09
DDX11-220ENST00000542244 ANO8Q9HCE9 1232 aaPredicted RBP28.1■■■□□ 2.09
DDX11-220ENST00000542244 ABCC6O95255 1503 aa28.09■■■□□ 2.09
DDX11-220ENST00000542244 BCL11BQ9C0K0 894 aaPredicted RBP28.09■■■□□ 2.09
DDX11-220ENST00000542244 TERF2IPQ9NYB0 399 aa28.09■■■□□ 2.09
DDX11-220ENST00000542244 PUS7Q96PZ0 661 aaKnown RBP28.08■■■□□ 2.09
DDX11-220ENST00000542244 CDCA7Q9BWT1 371 aaPredicted RBP28.08■■■□□ 2.09
DDX11-220ENST00000542244 NLRP2Q9NX02 1062 aa28.08■■■□□ 2.09
DDX11-220ENST00000542244 CCDC7Q96M83 1385 aa28.08■■■□□ 2.09
DDX11-220ENST00000542244 EXOC5O00471 708 aa28.07■■■□□ 2.08
DDX11-220ENST00000542244 KCNQ2O43526 872 aa28.07■■■□□ 2.08
DDX11-220ENST00000542244 ANKRD24Q8TF21 1146 aa28.07■■■□□ 2.08
DDX11-220ENST00000542244 PLSCR1O15162 318 aa28.06■■■□□ 2.08
DDX11-220ENST00000542244 BCL9O00512 1426 aa28.05■■■□□ 2.08
DDX11-220ENST00000542244 NBPF14Q5TI25 921 aa28.05■■■□□ 2.08
DDX11-220ENST00000542244 PDGFDQ9GZP0 370 aaPredicted RBP28.05■■■□□ 2.08
DDX11-220ENST00000542244 TNS2Q63HR2 1409 aa28.04■■■□□ 2.08
DDX11-220ENST00000542244 C11orf95C9JLR9 678 aaPredicted RBP28.04■■■□□ 2.08
DDX11-220ENST00000542244 ACSBG1Q96GR2 724 aa28.02■■■□□ 2.08
DDX11-220ENST00000542244 LTV1Q96GA3 475 aaPredicted RBP28.01■■■□□ 2.07
DDX11-220ENST00000542244 RGPD3A6NKT7 1758 aaPredicted RBP28■■■□□ 2.07
DDX11-220ENST00000542244 RGPD4Q7Z3J3 1758 aa28■■■□□ 2.07
DDX11-220ENST00000542244 USP47Q96K76 1375 aa27.99■■■□□ 2.07
DDX11-220ENST00000542244 IP6K1Q92551 441 aa27.99■■■□□ 2.07
DDX11-220ENST00000542244 MAP3K19Q56UN5 1328 aa27.98■■■□□ 2.07
DDX11-220ENST00000542244 IL2RBP14784 551 aa27.98■■■□□ 2.07
DDX11-220ENST00000542244 TXNRD1Q16881 649 aa27.96■■■□□ 2.07
DDX11-220ENST00000542244 NINLQ9Y2I6 1382 aa27.96■■■□□ 2.07
DDX11-220ENST00000542244 ANKRD36BQ8N2N9 1353 aa27.95■■■□□ 2.06
DDX11-220ENST00000542244 COG3Q96JB2 828 aa27.94■■■□□ 2.06
DDX11-220ENST00000542244 GGNBP2Q9H3C7 697 aa27.93■■■□□ 2.06
DDX11-220ENST00000542244 NHSQ6T4R5 1651 aa27.93■■■□□ 2.06
DDX11-220ENST00000542244 CASZ1Q86V15 1759 aa27.92■■■□□ 2.06
DDX11-220ENST00000542244 FYB1O15117 783 aa27.92■■■□□ 2.06
DDX11-220ENST00000542244 HOXC9P31274 260 aa27.92■■■□□ 2.06
DDX11-220ENST00000542244 RRS1Q15050 365 aaKnown RBP27.91■■■□□ 2.06
DDX11-220ENST00000542244 TMF1P82094 1093 aa27.9■■■□□ 2.06
DDX11-220ENST00000542244 SPON1Q9HCB6 807 aa27.9■■■□□ 2.06
DDX11-220ENST00000542244 RGPD2P0DJD1 1756 aa27.89■■■□□ 2.06
DDX11-220ENST00000542244 FAM208AQ9UK61 1670 aaKnown RBP27.87■■■□□ 2.05
DDX11-220ENST00000542244 ZBTB7AO95365 584 aa27.87■■■□□ 2.05
DDX11-220ENST00000542244 AMPHP49418 695 aa27.87■■■□□ 2.05
DDX11-220ENST00000542244 DDX54Q8TDD1 881 aaKnown RBP27.87■■■□□ 2.05
DDX11-220ENST00000542244 CARD14Q9BXL6 1004 aa27.86■■■□□ 2.05
DDX11-220ENST00000542244 BTAF1O14981 1849 aa27.85■■■□□ 2.05
DDX11-220ENST00000542244 SLC15A2Q16348 729 aa27.84■■■□□ 2.05
DDX11-220ENST00000542244 USHBP1Q8N6Y0 703 aa27.84■■■□□ 2.05
DDX11-220ENST00000542244 PCGF6Q9BYE7 350 aa27.84■■■□□ 2.05
DDX11-220ENST00000542244 MEGF6O75095 1541 aa27.83■■■□□ 2.05
DDX11-220ENST00000542244 NBPF6Q5VWK0 638 aa27.83■■■□□ 2.05
DDX11-220ENST00000542244 NBPF4Q96M43 638 aa27.83■■■□□ 2.05
DDX11-220ENST00000542244 LRRC4BQ9NT99 713 aa27.83■■■□□ 2.05
DDX11-220ENST00000542244 ATF5Q9Y2D1 282 aaPredicted RBP27.83■■■□□ 2.05
DDX11-220ENST00000542244 STK32BQ9NY57 414 aa27.82■■■□□ 2.04
DDX11-220ENST00000542244 MYOM1P52179 1685 aa27.81■■■□□ 2.04
DDX11-220ENST00000542244 SLC24A1O60721 1099 aa27.81■■■□□ 2.04
DDX11-220ENST00000542244 PTGER2P43116 358 aa27.81■■■□□ 2.04
DDX11-220ENST00000542244 PPP1R1BQ9UD71 204 aaPredicted RBP27.81■■■□□ 2.04
DDX11-220ENST00000542244 PAPPAQ13219 1627 aa27.81■■■□□ 2.04
DDX11-220ENST00000542244 ZNF827Q17R98 1081 aa27.8■■■□□ 2.04
DDX11-220ENST00000542244 SHANK3Q9BYB0 1731 aa27.8■■■□□ 2.04
DDX11-220ENST00000542244 KCNQ4P56696 695 aa27.79■■■□□ 2.04
DDX11-220ENST00000542244 HSP90AB2PQ58FF8 381 aa27.78■■■□□ 2.04
DDX11-220ENST00000542244 RTL1A6NKG5 1358 aa27.75■■■□□ 2.03
DDX11-220ENST00000542244 NSD2O96028 1365 aa27.75■■■□□ 2.03
DDX11-220ENST00000542244 PRIM1P49642 420 aaKnown RBP27.75■■■□□ 2.03
DDX11-220ENST00000542244 KIF20BQ96Q89 1820 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms