RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 WASHC2AQ641Q2 1341 aa16.6■□□□□ 0.25
TRPM1-203ENST00000542188 CCDC144AA2RUR9 1427 aa16.59■□□□□ 0.25
TRPM1-203ENST00000542188 NUP62CLQ9H1M0 184 aa16.59■□□□□ 0.25
TRPM1-203ENST00000542188 K7ELQ4 463 aaPredicted RBP16.58■□□□□ 0.25
TRPM1-203ENST00000542188 ZSCAN30Q86W11 494 aa16.58■□□□□ 0.25
TRPM1-203ENST00000542188 TRIM21P19474 475 aaKnown RBP16.58■□□□□ 0.25
TRPM1-203ENST00000542188 GCC1Q96CN9 775 aa16.58■□□□□ 0.25
TRPM1-203ENST00000542188 CCDC113Q9H0I3 377 aa16.58■□□□□ 0.25
TRPM1-203ENST00000542188 ZHX3Q9H4I2 956 aa16.58■□□□□ 0.25
TRPM1-203ENST00000542188 EIF5P55010 431 aaKnown RBP16.58■□□□□ 0.24
TRPM1-203ENST00000542188 IFFO1Q0D2I5 559 aa16.58■□□□□ 0.24
TRPM1-203ENST00000542188 DNAI2Q9GZS0 605 aa16.58■□□□□ 0.24
TRPM1-203ENST00000542188 CCDC175P0C221 793 aa16.58■□□□□ 0.24
TRPM1-203ENST00000542188 SPA17Q15506 151 aa16.57■□□□□ 0.24
TRPM1-203ENST00000542188 C6orf163Q5TEZ5 329 aa16.57■□□□□ 0.24
TRPM1-203ENST00000542188 CDKL5O76039 1030 aa16.57■□□□□ 0.24
TRPM1-203ENST00000542188 PTPN14Q15678 1187 aa16.57■□□□□ 0.24
TRPM1-203ENST00000542188 DNAJC2Q99543 621 aaKnown RBP16.57■□□□□ 0.24
TRPM1-203ENST00000542188 WASHC2CQ9Y4E1 1318 aa16.57■□□□□ 0.24
TRPM1-203ENST00000542188 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.57■□□□□ 0.24
TRPM1-203ENST00000542188 CIZ1Q9ULV3 898 aaPredicted RBP16.57■□□□□ 0.24
TRPM1-203ENST00000542188 ERCC6Q03468 1493 aa16.57■□□□□ 0.24
TRPM1-203ENST00000542188 KIF5CO60282 957 aa16.57■□□□□ 0.24
TRPM1-203ENST00000542188 SOGA3Q5TF21 947 aa16.57■□□□□ 0.24
TRPM1-203ENST00000542188 SPATA32Q96LK8 384 aa16.57■□□□□ 0.24
TRPM1-203ENST00000542188 CCDC69A6NI79 296 aa16.56■□□□□ 0.24
TRPM1-203ENST00000542188 ANAPC15P60006 121 aa16.56■□□□□ 0.24
TRPM1-203ENST00000542188 NUTM2DQ5VT03 806 aaPredicted RBP16.56■□□□□ 0.24
TRPM1-203ENST00000542188 CBX1P83916 185 aa16.56■□□□□ 0.24
TRPM1-203ENST00000542188 SPECC1LQ69YQ0 1117 aa16.56■□□□□ 0.24
TRPM1-203ENST00000542188 SOGA1O94964 1423 aa16.56■□□□□ 0.24
TRPM1-203ENST00000542188 IBSPP21815 317 aaPredicted RBP16.56■□□□□ 0.24
TRPM1-203ENST00000542188 PRKCSHP14314 528 aaPredicted RBP16.55■□□□□ 0.24
TRPM1-203ENST00000542188 USP47Q96K76 1375 aa16.55■□□□□ 0.24
TRPM1-203ENST00000542188 KIF18AQ8NI77 898 aa16.55■□□□□ 0.24
TRPM1-203ENST00000542188 ZSCAN31Q96LW9 406 aaPredicted RBP16.55■□□□□ 0.24
TRPM1-203ENST00000542188 LUZP1Q86V48 1076 aa16.55■□□□□ 0.24
TRPM1-203ENST00000542188 NUTM2FA1L443 756 aa16.55■□□□□ 0.24
TRPM1-203ENST00000542188 DDX23Q9BUQ8 820 aaKnown RBP16.55■□□□□ 0.24
TRPM1-203ENST00000542188 PANK1Q8TE04 598 aa16.54■□□□□ 0.24
TRPM1-203ENST00000542188 IPO4Q8TEX9 1081 aaKnown RBP16.54■□□□□ 0.24
TRPM1-203ENST00000542188 SSR1P43307 286 aaKnown RBP16.54■□□□□ 0.24
TRPM1-203ENST00000542188 CCDC83Q8IWF9 413 aa16.54■□□□□ 0.24
TRPM1-203ENST00000542188 CUX2O14529 1486 aa16.54■□□□□ 0.24
TRPM1-203ENST00000542188 TTC39AQ5SRH9 613 aa16.54■□□□□ 0.24
TRPM1-203ENST00000542188 DAAM2Q86T65 1068 aa16.54■□□□□ 0.24
TRPM1-203ENST00000542188 BCCIPQ9P287 314 aaKnown RBP eCLIP16.54■□□□□ 0.24
TRPM1-203ENST00000542188 LARP1BQ659C4 914 aaKnown RBP16.54■□□□□ 0.24
TRPM1-203ENST00000542188 VGFO15240 615 aaPredicted RBP16.53■□□□□ 0.24
TRPM1-203ENST00000542188 NACAP1Q9BZK3 213 aa16.53■□□□□ 0.24
TRPM1-203ENST00000542188 CCDC158Q5M9N0 1113 aa16.53■□□□□ 0.24
TRPM1-203ENST00000542188 CEP131Q9UPN4 1083 aa16.53■□□□□ 0.24
TRPM1-203ENST00000542188 KANK4Q5T7N3 995 aaPredicted RBP16.53■□□□□ 0.24
TRPM1-203ENST00000542188 PPP1R12BO60237 982 aaPredicted RBP16.52■□□□□ 0.24
TRPM1-203ENST00000542188 SURF6O75683 361 aaKnown RBP16.52■□□□□ 0.24
TRPM1-203ENST00000542188 GNL3LQ9NVN8 582 aaKnown RBP16.52■□□□□ 0.24
TRPM1-203ENST00000542188 GRIPAP1Q4V328 841 aa16.52■□□□□ 0.24
TRPM1-203ENST00000542188 WASF1Q92558 559 aa16.52■□□□□ 0.24
TRPM1-203ENST00000542188 PPP6R1Q9UPN7 881 aa16.52■□□□□ 0.23
TRPM1-203ENST00000542188 UBE4AQ14139 1066 aa16.52■□□□□ 0.23
TRPM1-203ENST00000542188 MAP3K11Q16584 847 aa16.52■□□□□ 0.23
TRPM1-203ENST00000542188 CCDC30Q5VVM6 783 aa16.52■□□□□ 0.23
TRPM1-203ENST00000542188 PRDM10Q9NQV6 1147 aa16.52■□□□□ 0.23
TRPM1-203ENST00000542188 SFPQP23246 707 aaKnown RBP eCLIP16.51■□□□□ 0.23
TRPM1-203ENST00000542188 SMARCC1Q92922 1105 aaPredicted RBP16.51■□□□□ 0.23
TRPM1-203ENST00000542188 TAOK3Q9H2K8 898 aa16.51■□□□□ 0.23
TRPM1-203ENST00000542188 PDZRN3Q9UPQ7 1066 aa16.51■□□□□ 0.23
TRPM1-203ENST00000542188 CFAP100Q494V2 611 aa16.51■□□□□ 0.23
TRPM1-203ENST00000542188 GOPCQ9HD26 462 aa16.51■□□□□ 0.23
TRPM1-203ENST00000542188 GSTTP1A0A1W2PQM5 241 aa16.51■□□□□ 0.23
TRPM1-203ENST00000542188 HOOK3Q86VS8 718 aa16.51■□□□□ 0.23
TRPM1-203ENST00000542188 VPS36Q86VN1 386 aa16.5■□□□□ 0.23
TRPM1-203ENST00000542188 SYTL4Q96C24 671 aaPredicted RBP16.5■□□□□ 0.23
TRPM1-203ENST00000542188 BMS1Q14692 1282 aaKnown RBP16.5■□□□□ 0.23
TRPM1-203ENST00000542188 CCDC178Q5BJE1 867 aa16.5■□□□□ 0.23
TRPM1-203ENST00000542188 NAA15Q9BXJ9 866 aaKnown RBP16.5■□□□□ 0.23
TRPM1-203ENST00000542188 PAFAH1B1P43034 410 aa16.5■□□□□ 0.23
TRPM1-203ENST00000542188 FKBP15Q5T1M5 1219 aa16.5■□□□□ 0.23
TRPM1-203ENST00000542188 AIMP1Q12904 312 aaKnown RBP16.5■□□□□ 0.23
TRPM1-203ENST00000542188 STK3Q13188 491 aa16.5■□□□□ 0.23
TRPM1-203ENST00000542188 ZSCAN25Q6NSZ9 544 aa16.5■□□□□ 0.23
TRPM1-203ENST00000542188 MPNDQ8N594 471 aa16.49■□□□□ 0.23
TRPM1-203ENST00000542188 CCDC18Q5T9S5 1454 aa16.49■□□□□ 0.23
TRPM1-203ENST00000542188 KIF4BQ2VIQ3 1234 aa16.49■□□□□ 0.23
TRPM1-203ENST00000542188 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.49■□□□□ 0.23
TRPM1-203ENST00000542188 V9GYY5 206 aaPredicted RBP16.49■□□□□ 0.23
TRPM1-203ENST00000542188 FERP16591 822 aa16.49■□□□□ 0.23
TRPM1-203ENST00000542188 MATR3P43243 847 aaKnown RBP eCLIP16.49■□□□□ 0.23
TRPM1-203ENST00000542188 GTF2A1P52655 376 aaPredicted RBP16.49■□□□□ 0.23
TRPM1-203ENST00000542188 DNAAF4Q8WXU2 420 aa16.49■□□□□ 0.23
TRPM1-203ENST00000542188 USO1O60763 962 aaKnown RBP16.48■□□□□ 0.23
TRPM1-203ENST00000542188 GTF2F1P35269 517 aaKnown RBP eCLIP16.48■□□□□ 0.23
TRPM1-203ENST00000542188 NEMFO60524 1076 aa16.48■□□□□ 0.23
TRPM1-203ENST00000542188 URI1O94763 535 aaPredicted RBP16.48■□□□□ 0.23
TRPM1-203ENST00000542188 CTR9Q6PD62 1173 aa16.48■□□□□ 0.23
TRPM1-203ENST00000542188 TSG101Q99816 390 aa16.47■□□□□ 0.23
TRPM1-203ENST00000542188 GNAI2P04899 355 aa16.47■□□□□ 0.23
TRPM1-203ENST00000542188 RAPGEF4Q8WZA2 1011 aa16.47■□□□□ 0.23
TRPM1-203ENST00000542188 LARP1Q6PKG0 1096 aaKnown RBP16.47■□□□□ 0.23
TRPM1-203ENST00000542188 PDRG1Q9NUG6 133 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms