RNA–Protein interactions for RNA: ENST00000542129.5

DDX11-218, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 1,561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-218ENST00000542129 ABCA3Q99758 1704 aa22.23■■□□□ 1.15
DDX11-218ENST00000542129 RTL1A6NKG5 1358 aa22.23■■□□□ 1.15
DDX11-218ENST00000542129 KIF24Q5T7B8 1368 aa22.23■■□□□ 1.15
DDX11-218ENST00000542129 CENPBP07199 599 aaPredicted RBP22.22■■□□□ 1.15
DDX11-218ENST00000542129 ARHGEF25Q86VW2 580 aa22.21■■□□□ 1.15
DDX11-218ENST00000542129 ZC3H6P61129 1189 aaKnown RBP22.21■■□□□ 1.15
DDX11-218ENST00000542129 ZBED9Q6R2W3 1325 aa22.2■■□□□ 1.14
DDX11-218ENST00000542129 COL16A1Q07092 1604 aaPredicted RBP22.19■■□□□ 1.14
DDX11-218ENST00000542129 IP6K1Q92551 441 aa22.19■■□□□ 1.14
DDX11-218ENST00000542129 SALL2Q9Y467 1007 aaPredicted RBP22.19■■□□□ 1.14
DDX11-218ENST00000542129 RGPD1P0DJD0 1748 aa22.19■■□□□ 1.14
DDX11-218ENST00000542129 RGPD5Q99666 1765 aa22.18■■□□□ 1.14
DDX11-218ENST00000542129 LRRC59Q96AG4 307 aaKnown RBP22.17■■□□□ 1.14
DDX11-218ENST00000542129 HMOX1P09601 288 aa22.16■■□□□ 1.14
DDX11-218ENST00000542129 RUNDC1Q96C34 613 aa22.16■■□□□ 1.14
DDX11-218ENST00000542129 LTV1Q96GA3 475 aaPredicted RBP22.16■■□□□ 1.14
DDX11-218ENST00000542129 APAF1O14727 1248 aa22.16■■□□□ 1.14
DDX11-218ENST00000542129 COL18A1P39060 1754 aa22.15■■□□□ 1.14
DDX11-218ENST00000542129 HAP1P54257 671 aaPredicted RBP22.14■■□□□ 1.13
DDX11-218ENST00000542129 RSPH6AQ9H0K4 717 aa22.14■■□□□ 1.13
DDX11-218ENST00000542129 KIAA0232Q92628 1395 aa22.14■■□□□ 1.13
DDX11-218ENST00000542129 PLEKHF1Q96S99 279 aa22.13■■□□□ 1.13
DDX11-218ENST00000542129 RGPD2P0DJD1 1756 aa22.13■■□□□ 1.13
DDX11-218ENST00000542129 COL22A1Q8NFW1 1626 aaPredicted RBP22.13■■□□□ 1.13
DDX11-218ENST00000542129 FCHSD2O94868 740 aa22.12■■□□□ 1.13
DDX11-218ENST00000542129 PRKAR2BP31323 418 aa22.12■■□□□ 1.13
DDX11-218ENST00000542129 CHRNA2Q15822 529 aa22.12■■□□□ 1.13
DDX11-218ENST00000542129 AEBP1Q8IUX7 1158 aa22.12■■□□□ 1.13
DDX11-218ENST00000542129 EYA1Q99502 592 aa22.12■■□□□ 1.13
DDX11-218ENST00000542129 AXIN2Q9Y2T1 843 aa22.12■■□□□ 1.13
DDX11-218ENST00000542129 CPDO75976 1380 aa22.11■■□□□ 1.13
DDX11-218ENST00000542129 SULT6B1Q6IMI4 303 aa22.11■■□□□ 1.13
DDX11-218ENST00000542129 TCP11L2Q8N4U5 519 aa22.11■■□□□ 1.13
DDX11-218ENST00000542129 IGSF1Q8N6C5 1336 aa22.1■■□□□ 1.13
DDX11-218ENST00000542129 PNNQ9H307 717 aaKnown RBP22.09■■□□□ 1.13
DDX11-218ENST00000542129 RRP7AQ9Y3A4 280 aaKnown RBP22.09■■□□□ 1.13
DDX11-218ENST00000542129 MAPK8IP3Q9UPT6 1336 aa22.09■■□□□ 1.13
DDX11-218ENST00000542129 ABCC6O95255 1503 aa22.08■■□□□ 1.13
DDX11-218ENST00000542129 NEUROD2Q15784 382 aa22.08■■□□□ 1.12
DDX11-218ENST00000542129 ANKRD24Q8TF21 1146 aa22.08■■□□□ 1.12
DDX11-218ENST00000542129 PRDM11Q9NQV5 511 aa22.07■■□□□ 1.12
DDX11-218ENST00000542129 LMO7Q8WWI1 1683 aa22.05■■□□□ 1.12
DDX11-218ENST00000542129 USHBP1Q8N6Y0 703 aa22.05■■□□□ 1.12
DDX11-218ENST00000542129 PHACTR3Q96KR7 559 aa22.05■■□□□ 1.12
DDX11-218ENST00000542129 KDRP35968 1356 aa22.05■■□□□ 1.12
DDX11-218ENST00000542129 ERBB3P21860 1342 aa22.05■■□□□ 1.12
DDX11-218ENST00000542129 NEFMP07197 916 aa22.04■■□□□ 1.12
DDX11-218ENST00000542129 NBPF6Q5VWK0 638 aa22.04■■□□□ 1.12
DDX11-218ENST00000542129 NBPF4Q96M43 638 aa22.04■■□□□ 1.12
DDX11-218ENST00000542129 CAMTA1Q9Y6Y1 1673 aa22.04■■□□□ 1.12
DDX11-218ENST00000542129 TMPOP42166 694 aaKnown RBP22.03■■□□□ 1.12
DDX11-218ENST00000542129 ZNF521Q96K83 1311 aa22.02■■□□□ 1.12
DDX11-218ENST00000542129 DLG5Q8TDM6 1919 aa22.02■■□□□ 1.12
DDX11-218ENST00000542129 NGEFQ8N5V2 710 aa22.01■■□□□ 1.11
DDX11-218ENST00000542129 FAM208AQ9UK61 1670 aaKnown RBP22.01■■□□□ 1.11
DDX11-218ENST00000542129 FAM83GA6ND36 823 aa21.99■■□□□ 1.11
DDX11-218ENST00000542129 NCAPD2Q15021 1401 aa21.99■■□□□ 1.11
DDX11-218ENST00000542129 CSB-PGBD3P0DP91 1061 aa21.99■■□□□ 1.11
DDX11-218ENST00000542129 NFE2L2Q16236 605 aa21.99■■□□□ 1.11
DDX11-218ENST00000542129 WWC1Q8IX03 1113 aa21.99■■□□□ 1.11
DDX11-218ENST00000542129 CDCA7LQ96GN5 454 aa21.99■■□□□ 1.11
DDX11-218ENST00000542129 COL14A1Q05707 1796 aaKnown RBP21.99■■□□□ 1.11
DDX11-218ENST00000542129 RIPK4P57078 832 aa21.98■■□□□ 1.11
DDX11-218ENST00000542129 COL5A2P05997 1499 aaPredicted RBP21.97■■□□□ 1.11
DDX11-218ENST00000542129 NUTM2BA6NNL0 878 aaPredicted RBP21.97■■□□□ 1.11
DDX11-218ENST00000542129 NUTM2EB1AL46 878 aaPredicted RBP21.97■■□□□ 1.11
DDX11-218ENST00000542129 PDE3BQ13370 1112 aa21.97■■□□□ 1.11
DDX11-218ENST00000542129 NUTM2AQ8IVF1 878 aaPredicted RBP21.97■■□□□ 1.11
DDX11-218ENST00000542129 PHF23Q9BUL5 403 aaPredicted RBP21.97■■□□□ 1.11
DDX11-218ENST00000542129 NLRP2Q9NX02 1062 aa21.97■■□□□ 1.11
DDX11-218ENST00000542129 JCADQ9P266 1359 aa21.96■■□□□ 1.11
DDX11-218ENST00000542129 CCDC27Q2M243 656 aa21.96■■□□□ 1.11
DDX11-218ENST00000542129 TRIM35Q9UPQ4 493 aa21.96■■□□□ 1.11
DDX11-218ENST00000542129 NCBP3Q53F19 620 aaKnown RBP21.95■■□□□ 1.11
DDX11-218ENST00000542129 ADAMTS2O95450 1211 aa21.95■■□□□ 1.1
DDX11-218ENST00000542129 HSPA1LP34931 641 aa21.95■■□□□ 1.1
DDX11-218ENST00000542129 GOLGA2Q08379 1002 aa21.95■■□□□ 1.1
DDX11-218ENST00000542129 PLCH1Q4KWH8 1693 aa21.94■■□□□ 1.1
DDX11-218ENST00000542129 MTHFSDQ2M296 383 aaKnown RBP21.93■■□□□ 1.1
DDX11-218ENST00000542129 STRN4Q9NRL3 753 aa21.93■■□□□ 1.1
DDX11-218ENST00000542129 WDR17Q8IZU2 1322 aa21.93■■□□□ 1.1
DDX11-218ENST00000542129 SPINK5Q9NQ38 1064 aaPredicted RBP21.92■■□□□ 1.1
DDX11-218ENST00000542129 BTG4Q9NY30 223 aa21.91■■□□□ 1.1
DDX11-218ENST00000542129 EVA1CP58658 441 aa21.9■■□□□ 1.1
DDX11-218ENST00000542129 SLFN5Q08AF3 891 aa21.9■■□□□ 1.1
DDX11-218ENST00000542129 TOM1L2Q6ZVM7 507 aa21.9■■□□□ 1.1
DDX11-218ENST00000542129 LARP1Q6PKG0 1096 aaKnown RBP21.89■■□□□ 1.09
DDX11-218ENST00000542129 WDR63Q8IWG1 891 aa21.89■■□□□ 1.09
DDX11-218ENST00000542129 GAS2L2Q8NHY3 880 aa21.89■■□□□ 1.09
DDX11-218ENST00000542129 THUMPD2Q9BTF0 503 aaKnown RBP21.87■■□□□ 1.09
DDX11-218ENST00000542129 NRAPQ86VF7 1730 aa21.87■■□□□ 1.09
DDX11-218ENST00000542129 MEGF6O75095 1541 aa21.87■■□□□ 1.09
DDX11-218ENST00000542129 E9PSI1 815 aa21.87■■□□□ 1.09
DDX11-218ENST00000542129 LMOD3Q0VAK6 560 aa21.87■■□□□ 1.09
DDX11-218ENST00000542129 DCTN1Q14203 1278 aa21.87■■□□□ 1.09
DDX11-218ENST00000542129 DUSP27Q5VZP5 1158 aa21.87■■□□□ 1.09
DDX11-218ENST00000542129 RAPGEF4Q8WZA2 1011 aa21.86■■□□□ 1.09
DDX11-218ENST00000542129 LRP6O75581 1613 aa21.85■■□□□ 1.09
DDX11-218ENST00000542129 TRMT2AQ8IZ69 625 aaKnown RBP21.85■■□□□ 1.09
DDX11-218ENST00000542129 SPATA31A6Q5VVP1 1343 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms