RNA–Protein interactions for RNA: ENST00000542099.5

ARL6IP4-219, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, human

TSL 3

Gene ARL6IP4, Length 1,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARL6IP4-219	ENST00000542099	AXIN2	Q9Y2T1	843 aa		33.26	■■■□□ 2.91
ARL6IP4-219	ENST00000542099	CPSF1	Q10570	1443 aa	Known RBP	33.26	■■■□□ 2.91
ARL6IP4-219	ENST00000542099	COL18A1	P39060	1754 aa		33.25	■■■□□ 2.91
ARL6IP4-219	ENST00000542099	TRIM26	Q12899	539 aa	Predicted RBP	33.25	■■■□□ 2.91
ARL6IP4-219	ENST00000542099	NEUROD1	Q13562	356 aa		33.25	■■■□□ 2.91
ARL6IP4-219	ENST00000542099	BCL11B	Q9C0K0	894 aa	Predicted RBP	33.24	■■■□□ 2.91
ARL6IP4-219	ENST00000542099	CARD10	Q9BWT7	1032 aa		33.23	■■■□□ 2.91
ARL6IP4-219	ENST00000542099	PEAK1	Q9H792	1746 aa		33.22	■■■□□ 2.91
ARL6IP4-219	ENST00000542099	BCL9	O00512	1426 aa		33.21	■■■□□ 2.91
ARL6IP4-219	ENST00000542099	SPON1	Q9HCB6	807 aa		33.21	■■■□□ 2.91
ARL6IP4-219	ENST00000542099	CSB-PGBD3	P0DP91	1061 aa		33.2	■■■□□ 2.91
ARL6IP4-219	ENST00000542099	LRRC37A3	O60309	1634 aa		33.2	■■■□□ 2.9
ARL6IP4-219	ENST00000542099	KTN1	Q86UP2	1357 aa	Known RBP	33.2	■■■□□ 2.9
ARL6IP4-219	ENST00000542099	AKAP12	Q02952	1782 aa		33.19	■■■□□ 2.9
ARL6IP4-219	ENST00000542099	RGPD3	A6NKT7	1758 aa	Predicted RBP	33.19	■■■□□ 2.9
ARL6IP4-219	ENST00000542099	RGPD4	Q7Z3J3	1758 aa		33.19	■■■□□ 2.9
ARL6IP4-219	ENST00000542099	SBNO2	Q9Y2G9	1366 aa		33.18	■■■□□ 2.9
ARL6IP4-219	ENST00000542099	KCNQ2	O43526	872 aa		33.17	■■■□□ 2.9
ARL6IP4-219	ENST00000542099	SOX12	O15370	315 aa		33.16	■■■□□ 2.9
ARL6IP4-219	ENST00000542099	MARCH10	Q8NA82	808 aa	Predicted RBP	33.16	■■■□□ 2.9
ARL6IP4-219	ENST00000542099	SBF2	Q86WG5	1849 aa		33.16	■■■□□ 2.9
ARL6IP4-219	ENST00000542099	EXOC5	O00471	708 aa		33.15	■■■□□ 2.9
ARL6IP4-219	ENST00000542099	CCDC7	Q96M83	1385 aa		33.15	■■■□□ 2.9
ARL6IP4-219	ENST00000542099	PPP1R1B	Q9UD71	204 aa	Predicted RBP	33.15	■■■□□ 2.9
ARL6IP4-219	ENST00000542099	ABCC6	O95255	1503 aa		33.14	■■■□□ 2.9
ARL6IP4-219	ENST00000542099	WNK3	Q9BYP7	1800 aa		33.11	■■■□□ 2.89
ARL6IP4-219	ENST00000542099	USP31	Q70CQ4	1352 aa		33.1	■■■□□ 2.89
ARL6IP4-219	ENST00000542099	NFAT5	O94916	1531 aa		33.1	■■■□□ 2.89
ARL6IP4-219	ENST00000542099	DCAF8L1	A6NGE4	600 aa		33.08	■■■□□ 2.89
ARL6IP4-219	ENST00000542099	CARD11	Q9BXL7	1154 aa		33.08	■■■□□ 2.89
ARL6IP4-219	ENST00000542099	RGPD5	Q99666	1765 aa		33.08	■■■□□ 2.89
ARL6IP4-219	ENST00000542099	NINL	Q9Y2I6	1382 aa		33.07	■■■□□ 2.88
ARL6IP4-219	ENST00000542099	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.06	■■■□□ 2.88
ARL6IP4-219	ENST00000542099	MON2	Q7Z3U7	1717 aa		33.05	■■■□□ 2.88
ARL6IP4-219	ENST00000542099	PTF1A	Q7RTS3	328 aa		33.05	■■■□□ 2.88
ARL6IP4-219	ENST00000542099	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	33.05	■■■□□ 2.88
ARL6IP4-219	ENST00000542099	PROM2	Q8N271	834 aa		33.04	■■■□□ 2.88
ARL6IP4-219	ENST00000542099	TMC1	Q8TDI8	760 aa		33.03	■■■□□ 2.88
ARL6IP4-219	ENST00000542099	PUS7	Q96PZ0	661 aa	Known RBP	33.03	■■■□□ 2.88
ARL6IP4-219	ENST00000542099	ANO8	Q9HCE9	1232 aa	Predicted RBP	33.02	■■■□□ 2.88
ARL6IP4-219	ENST00000542099	TERF2IP	Q9NYB0	399 aa		33.01	■■■□□ 2.87
ARL6IP4-219	ENST00000542099	TNS2	Q63HR2	1409 aa		33.01	■■■□□ 2.87
ARL6IP4-219	ENST00000542099	ERBB3	P21860	1342 aa		33.01	■■■□□ 2.87
ARL6IP4-219	ENST00000542099	TXNRD1	Q16881	649 aa		33	■■■□□ 2.87
ARL6IP4-219	ENST00000542099	PCGF6	Q9BYE7	350 aa		33	■■■□□ 2.87
ARL6IP4-219	ENST00000542099	USP54	Q70EL1	1684 aa		32.99	■■■□□ 2.87
ARL6IP4-219	ENST00000542099	NME9	Q86XW9	330 aa		32.99	■■■□□ 2.87
ARL6IP4-219	ENST00000542099	NLRP2	Q9NX02	1062 aa		32.99	■■■□□ 2.87
ARL6IP4-219	ENST00000542099	STK32B	Q9NY57	414 aa		32.99	■■■□□ 2.87
ARL6IP4-219	ENST00000542099	CD163L1	Q9NR16	1453 aa		32.98	■■■□□ 2.87
ARL6IP4-219	ENST00000542099	EDC4	Q6P2E9	1401 aa	Known RBP	32.97	■■■□□ 2.87
ARL6IP4-219	ENST00000542099	IL2RB	P14784	551 aa		32.96	■■■□□ 2.87
ARL6IP4-219	ENST00000542099	YY1	P25490	414 aa		32.96	■■■□□ 2.87
ARL6IP4-219	ENST00000542099	SLC12A5	Q9H2X9	1139 aa		32.96	■■■□□ 2.87
ARL6IP4-219	ENST00000542099	SLC24A1	O60721	1099 aa		32.94	■■■□□ 2.86
ARL6IP4-219	ENST00000542099	SLC15A2	Q16348	729 aa		32.94	■■■□□ 2.86
ARL6IP4-219	ENST00000542099	TONSL	Q96HA7	1378 aa		32.93	■■■□□ 2.86
ARL6IP4-219	ENST00000542099	CASZ1	Q86V15	1759 aa		32.93	■■■□□ 2.86
ARL6IP4-219	ENST00000542099	ANKRD24	Q8TF21	1146 aa		32.92	■■■□□ 2.86
ARL6IP4-219	ENST00000542099	LTN1	O94822	1766 aa		32.88	■■■□□ 2.85
ARL6IP4-219	ENST00000542099	ZBTB7A	O95365	584 aa		32.88	■■■□□ 2.85
ARL6IP4-219	ENST00000542099	PDGFD	Q9GZP0	370 aa	Predicted RBP	32.88	■■■□□ 2.85
ARL6IP4-219	ENST00000542099		A0A1W2PP64	1363 aa		32.87	■■■□□ 2.85
ARL6IP4-219	ENST00000542099	NHS	Q6T4R5	1651 aa		32.86	■■■□□ 2.85
ARL6IP4-219	ENST00000542099	PTGER2	P43116	358 aa		32.85	■■■□□ 2.85
ARL6IP4-219	ENST00000542099	IP6K1	Q92551	441 aa		32.85	■■■□□ 2.85
ARL6IP4-219	ENST00000542099	ACSBG1	Q96GR2	724 aa		32.85	■■■□□ 2.85
ARL6IP4-219	ENST00000542099	MTFR1L	Q9H019	292 aa		32.84	■■■□□ 2.85
ARL6IP4-219	ENST00000542099	ATF5	Q9Y2D1	282 aa	Predicted RBP	32.82	■■■□□ 2.84
ARL6IP4-219	ENST00000542099	COG3	Q96JB2	828 aa		32.79	■■■□□ 2.84
ARL6IP4-219	ENST00000542099	KAT6B	Q8WYB5	2073 aa		32.78	■■■□□ 2.84
ARL6IP4-219	ENST00000542099	TESK2	Q96S53	571 aa		32.77	■■■□□ 2.84
ARL6IP4-219	ENST00000542099	ST20-MTHFS	A0A0A6YYL1	179 aa		32.75	■■■□□ 2.83
ARL6IP4-219	ENST00000542099	FAM208A	Q9UK61	1670 aa	Known RBP	32.74	■■■□□ 2.83
ARL6IP4-219	ENST00000542099	SLC27A3	Q5K4L6	730 aa		32.73	■■■□□ 2.83
ARL6IP4-219	ENST00000542099	SYT17	Q9BSW7	474 aa		32.73	■■■□□ 2.83
ARL6IP4-219	ENST00000542099	BTAF1	O14981	1849 aa		32.72	■■■□□ 2.83
ARL6IP4-219	ENST00000542099	MYOM1	P52179	1685 aa		32.72	■■■□□ 2.83
ARL6IP4-219	ENST00000542099	DDX54	Q8TDD1	881 aa	Known RBP	32.72	■■■□□ 2.83
ARL6IP4-219	ENST00000542099	LTV1	Q96GA3	475 aa	Predicted RBP	32.72	■■■□□ 2.83
ARL6IP4-219	ENST00000542099	SGIP1	Q9BQI5	828 aa		32.72	■■■□□ 2.83
ARL6IP4-219	ENST00000542099	FHDC1	Q9C0D6	1143 aa	Predicted RBP	32.72	■■■□□ 2.83
ARL6IP4-219	ENST00000542099	AMPH	P49418	695 aa		32.71	■■■□□ 2.83
ARL6IP4-219	ENST00000542099	MAP3K19	Q56UN5	1328 aa		32.7	■■■□□ 2.82
ARL6IP4-219	ENST00000542099	HOXC9	P31274	260 aa		32.69	■■■□□ 2.82
ARL6IP4-219	ENST00000542099	PAPPA	Q13219	1627 aa		32.69	■■■□□ 2.82
ARL6IP4-219	ENST00000542099	SLC16A10	Q8TF71	515 aa		32.68	■■■□□ 2.82
ARL6IP4-219	ENST00000542099	ARX	Q96QS3	562 aa		32.68	■■■□□ 2.82
ARL6IP4-219	ENST00000542099	LRRC4B	Q9NT99	713 aa		32.67	■■■□□ 2.82
ARL6IP4-219	ENST00000542099	ANKRD36B	Q8N2N9	1353 aa		32.67	■■■□□ 2.82
ARL6IP4-219	ENST00000542099	ZNF827	Q17R98	1081 aa		32.64	■■■□□ 2.82
ARL6IP4-219	ENST00000542099	ZCRB1	Q8TBF4	217 aa	Known RBP	32.64	■■■□□ 2.82
ARL6IP4-219	ENST00000542099	RTL1	A6NKG5	1358 aa		32.63	■■■□□ 2.81
ARL6IP4-219	ENST00000542099	MAP3K5	Q99683	1374 aa		32.63	■■■□□ 2.81
ARL6IP4-219	ENST00000542099	TMF1	P82094	1093 aa		32.63	■■■□□ 2.81
ARL6IP4-219	ENST00000542099	AKT1S1	Q96B36	256 aa		32.63	■■■□□ 2.81
ARL6IP4-219	ENST00000542099	CGNL1	Q0VF96	1302 aa		32.62	■■■□□ 2.81
ARL6IP4-219	ENST00000542099	PRIM1	P49642	420 aa	Known RBP	32.61	■■■□□ 2.81
ARL6IP4-219	ENST00000542099	SYTL4	Q96C24	671 aa	Predicted RBP	32.61	■■■□□ 2.81
ARL6IP4-219	ENST00000542099	UTRN	P46939	3433 aa		32.59	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms