RNA–Protein interactions for RNA: ENST00000541866.5

COPS7A-212, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-212ENST00000541866 LRP5O75197 1615 aa20.2■□□□□ 0.82
COPS7A-212ENST00000541866 PARD3Q8TEW0 1356 aa20.2■□□□□ 0.82
COPS7A-212ENST00000541866 PIK3C2AO00443 1686 aa20.19■□□□□ 0.82
COPS7A-212ENST00000541866 CDCA7Q9BWT1 371 aaPredicted RBP20.19■□□□□ 0.82
COPS7A-212ENST00000541866 NBPF14Q5TI25 921 aa20.18■□□□□ 0.82
COPS7A-212ENST00000541866 TRIM26Q12899 539 aaPredicted RBP20.17■□□□□ 0.82
COPS7A-212ENST00000541866 SLC12A5Q9H2X9 1139 aa20.17■□□□□ 0.82
COPS7A-212ENST00000541866 TERF2IPQ9NYB0 399 aa20.17■□□□□ 0.82
COPS7A-212ENST00000541866 TNS1Q9HBL0 1735 aaKnown RBP20.16■□□□□ 0.82
COPS7A-212ENST00000541866 CARD10Q9BWT7 1032 aa20.16■□□□□ 0.82
COPS7A-212ENST00000541866 AKAP12Q02952 1782 aa20.16■□□□□ 0.82
COPS7A-212ENST00000541866 NME9Q86XW9 330 aa20.15■□□□□ 0.82
COPS7A-212ENST00000541866 OVOS2A0A0G2JMS6 1433 aa20.14■□□□□ 0.81
COPS7A-212ENST00000541866 OVOS2A0A0J9YW53 1432 aa20.14■□□□□ 0.81
COPS7A-212ENST00000541866 OVOS2Q6IE36 1432 aa20.14■□□□□ 0.81
COPS7A-212ENST00000541866 PUS7Q96PZ0 661 aaKnown RBP20.14■□□□□ 0.81
COPS7A-212ENST00000541866 EXOC5O00471 708 aa20.13■□□□□ 0.81
COPS7A-212ENST00000541866 SLC24A1O60721 1099 aa20.13■□□□□ 0.81
COPS7A-212ENST00000541866 PARP4Q9UKK3 1724 aaKnown RBP20.13■□□□□ 0.81
COPS7A-212ENST00000541866 USP31Q70CQ4 1352 aa20.12■□□□□ 0.81
COPS7A-212ENST00000541866 COL18A1P39060 1754 aa20.12■□□□□ 0.81
COPS7A-212ENST00000541866 ST20-MTHFSA0A0A6YYL1 179 aa20.11■□□□□ 0.81
COPS7A-212ENST00000541866 MARCH10Q8NA82 808 aaPredicted RBP20.11■□□□□ 0.81
COPS7A-212ENST00000541866 BCL11BQ9C0K0 894 aaPredicted RBP20.1■□□□□ 0.81
COPS7A-212ENST00000541866 NLRP2Q9NX02 1062 aa20.1■□□□□ 0.81
COPS7A-212ENST00000541866 CCDC7Q96M83 1385 aa20.09■□□□□ 0.81
COPS7A-212ENST00000541866 NFAT5O94916 1531 aa20.08■□□□□ 0.81
COPS7A-212ENST00000541866 CD163L1Q9NR16 1453 aa20.08■□□□□ 0.81
COPS7A-212ENST00000541866 PLSCR1O15162 318 aa20.08■□□□□ 0.81
COPS7A-212ENST00000541866 EDC4Q6P2E9 1401 aaKnown RBP20.08■□□□□ 0.8
COPS7A-212ENST00000541866 TESK2Q96S53 571 aa20.07■□□□□ 0.8
COPS7A-212ENST00000541866 MON2Q7Z3U7 1717 aa20.07■□□□□ 0.8
COPS7A-212ENST00000541866 A0A1W2PP64 1363 aa20.07■□□□□ 0.8
COPS7A-212ENST00000541866 ANKRD24Q8TF21 1146 aa20.05■□□□□ 0.8
COPS7A-212ENST00000541866 RGPD5Q99666 1765 aa20.05■□□□□ 0.8
COPS7A-212ENST00000541866 LRRC37A3O60309 1634 aa20.05■□□□□ 0.8
COPS7A-212ENST00000541866 ERBB3P21860 1342 aa20.04■□□□□ 0.8
COPS7A-212ENST00000541866 PTF1AQ7RTS3 328 aa20.04■□□□□ 0.8
COPS7A-212ENST00000541866 NINLQ9Y2I6 1382 aa20.04■□□□□ 0.8
COPS7A-212ENST00000541866 ABCC6O95255 1503 aa20.03■□□□□ 0.8
COPS7A-212ENST00000541866 IL2RBP14784 551 aa20.03■□□□□ 0.8
COPS7A-212ENST00000541866 YY1P25490 414 aa20.03■□□□□ 0.8
COPS7A-212ENST00000541866 COG3Q96JB2 828 aa20.03■□□□□ 0.8
COPS7A-212ENST00000541866 TMF1P82094 1093 aa20.02■□□□□ 0.8
COPS7A-212ENST00000541866 PEAK1Q9H792 1746 aa20.02■□□□□ 0.79
COPS7A-212ENST00000541866 BCL9O00512 1426 aa20.02■□□□□ 0.79
COPS7A-212ENST00000541866 LTV1Q96GA3 475 aaPredicted RBP20.01■□□□□ 0.79
COPS7A-212ENST00000541866 RREB1Q92766 1687 aa20■□□□□ 0.79
COPS7A-212ENST00000541866 IP6K1Q92551 441 aa20■□□□□ 0.79
COPS7A-212ENST00000541866 SPON1Q9HCB6 807 aa20■□□□□ 0.79
COPS7A-212ENST00000541866 PPP1R1BQ9UD71 204 aaPredicted RBP19.99■□□□□ 0.79
COPS7A-212ENST00000541866 NUP188Q5SRE5 1749 aa19.99■□□□□ 0.79
COPS7A-212ENST00000541866 KCNQ2O43526 872 aa19.98■□□□□ 0.79
COPS7A-212ENST00000541866 AMPHP49418 695 aa19.98■□□□□ 0.79
COPS7A-212ENST00000541866 TNS2Q63HR2 1409 aa19.98■□□□□ 0.79
COPS7A-212ENST00000541866 SBF2Q86WG5 1849 aa19.97■□□□□ 0.79
COPS7A-212ENST00000541866 WNK3Q9BYP7 1800 aa19.97■□□□□ 0.79
COPS7A-212ENST00000541866 TXNRD1Q16881 649 aa19.97■□□□□ 0.79
COPS7A-212ENST00000541866 CDCA8Q53HL2 280 aa19.97■□□□□ 0.79
COPS7A-212ENST00000541866 PROM2Q8N271 834 aa19.97■□□□□ 0.79
COPS7A-212ENST00000541866 ACSBG1Q96GR2 724 aa19.97■□□□□ 0.79
COPS7A-212ENST00000541866 USP54Q70EL1 1684 aa19.97■□□□□ 0.79
COPS7A-212ENST00000541866 USP47Q96K76 1375 aa19.96■□□□□ 0.79
COPS7A-212ENST00000541866 ANKRD36BQ8N2N9 1353 aa19.95■□□□□ 0.79
COPS7A-212ENST00000541866 ANO8Q9HCE9 1232 aaPredicted RBP19.95■□□□□ 0.78
COPS7A-212ENST00000541866 STK32BQ9NY57 414 aa19.95■□□□□ 0.78
COPS7A-212ENST00000541866 LTN1O94822 1766 aa19.95■□□□□ 0.78
COPS7A-212ENST00000541866 FBLN1P23142 703 aa19.94■□□□□ 0.78
COPS7A-212ENST00000541866 DDX54Q8TDD1 881 aaKnown RBP19.94■□□□□ 0.78
COPS7A-212ENST00000541866 MAP3K19Q56UN5 1328 aa19.94■□□□□ 0.78
COPS7A-212ENST00000541866 HOXC9P31274 260 aa19.93■□□□□ 0.78
COPS7A-212ENST00000541866 PCGF6Q9BYE7 350 aa19.93■□□□□ 0.78
COPS7A-212ENST00000541866 TIMELESSQ9UNS1 1208 aa19.92■□□□□ 0.78
COPS7A-212ENST00000541866 RGPD3A6NKT7 1758 aaPredicted RBP19.91■□□□□ 0.78
COPS7A-212ENST00000541866 RGPD4Q7Z3J3 1758 aa19.91■□□□□ 0.78
COPS7A-212ENST00000541866 FYB1O15117 783 aa19.91■□□□□ 0.78
COPS7A-212ENST00000541866 GGNBP2Q9H3C7 697 aa19.91■□□□□ 0.78
COPS7A-212ENST00000541866 DCAF8L1A6NGE4 600 aa19.9■□□□□ 0.78
COPS7A-212ENST00000541866 SLC15A2Q16348 729 aa19.9■□□□□ 0.78
COPS7A-212ENST00000541866 RRS1Q15050 365 aaKnown RBP19.89■□□□□ 0.77
COPS7A-212ENST00000541866 ZBTB7AO95365 584 aa19.88■□□□□ 0.77
COPS7A-212ENST00000541866 PDGFDQ9GZP0 370 aaPredicted RBP19.88■□□□□ 0.77
COPS7A-212ENST00000541866 KAT6BQ8WYB5 2073 aa19.87■□□□□ 0.77
COPS7A-212ENST00000541866 ZCRB1Q8TBF4 217 aaKnown RBP19.86■□□□□ 0.77
COPS7A-212ENST00000541866 SYTL4Q96C24 671 aaPredicted RBP19.86■□□□□ 0.77
COPS7A-212ENST00000541866 ATF5Q9Y2D1 282 aaPredicted RBP19.86■□□□□ 0.77
COPS7A-212ENST00000541866 SENP3-EIF4A1A0A087X0R7 540 aa19.84■□□□□ 0.77
COPS7A-212ENST00000541866 RTL1A6NKG5 1358 aa19.83■□□□□ 0.77
COPS7A-212ENST00000541866 CLSPNQ9HAW4 1339 aa19.83■□□□□ 0.77
COPS7A-212ENST00000541866 NBPF6Q5VWK0 638 aa19.83■□□□□ 0.77
COPS7A-212ENST00000541866 RAPGEF4Q8WZA2 1011 aa19.83■□□□□ 0.77
COPS7A-212ENST00000541866 NBPF4Q96M43 638 aa19.83■□□□□ 0.77
COPS7A-212ENST00000541866 NHSQ6T4R5 1651 aa19.83■□□□□ 0.76
COPS7A-212ENST00000541866 SMG6Q86US8 1419 aaKnown RBP19.83■□□□□ 0.76
COPS7A-212ENST00000541866 PRIM1P49642 420 aaKnown RBP19.82■□□□□ 0.76
COPS7A-212ENST00000541866 FAM208AQ9UK61 1670 aaKnown RBP19.81■□□□□ 0.76
COPS7A-212ENST00000541866 HSP90AB2PQ58FF8 381 aa19.81■□□□□ 0.76
COPS7A-212ENST00000541866 POLR3GLQ9BT43 218 aa19.81■□□□□ 0.76
COPS7A-212ENST00000541866 CARD14Q9BXL6 1004 aa19.81■□□□□ 0.76
COPS7A-212ENST00000541866 MTFR1LQ9H019 292 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms