RNA–Protein interactions for RNA: ENST00000541846.5

LMO3-228, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LMO3, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-228ENST00000541846 HAP1P54257 671 aaPredicted RBP16.71■□□□□ 0.27
LMO3-228ENST00000541846 IP6K1Q92551 441 aa16.71■□□□□ 0.27
LMO3-228ENST00000541846 ZBTB7CA1YPR0 619 aa16.7■□□□□ 0.26
LMO3-228ENST00000541846 NUTM2BA6NNL0 878 aaPredicted RBP16.7■□□□□ 0.26
LMO3-228ENST00000541846 NUTM2EB1AL46 878 aaPredicted RBP16.7■□□□□ 0.26
LMO3-228ENST00000541846 DIAPH1O60610 1272 aaKnown RBP16.7■□□□□ 0.26
LMO3-228ENST00000541846 HOXC9P31274 260 aa16.7■□□□□ 0.26
LMO3-228ENST00000541846 WDR43Q15061 677 aaKnown RBP eCLIP16.7■□□□□ 0.26
LMO3-228ENST00000541846 HSP90AB2PQ58FF8 381 aa16.7■□□□□ 0.26
LMO3-228ENST00000541846 ILDR1Q86SU0 546 aaPredicted RBP16.7■□□□□ 0.26
LMO3-228ENST00000541846 NUTM2AQ8IVF1 878 aaPredicted RBP16.7■□□□□ 0.26
LMO3-228ENST00000541846 RGPD1P0DJD0 1748 aa16.7■□□□□ 0.26
LMO3-228ENST00000541846 PRDM11Q9NQV5 511 aa16.69■□□□□ 0.26
LMO3-228ENST00000541846 AXIN2Q9Y2T1 843 aa16.69■□□□□ 0.26
LMO3-228ENST00000541846 ABCC6O95255 1503 aa16.69■□□□□ 0.26
LMO3-228ENST00000541846 LRP6O75581 1613 aa16.68■□□□□ 0.26
LMO3-228ENST00000541846 ADAMTS2O95450 1211 aa16.68■□□□□ 0.26
LMO3-228ENST00000541846 IL13P35225 146 aa16.68■□□□□ 0.26
LMO3-228ENST00000541846 ADAMTS8Q9UP79 889 aa16.68■□□□□ 0.26
LMO3-228ENST00000541846 RGPD2P0DJD1 1756 aa16.67■□□□□ 0.26
LMO3-228ENST00000541846 LMO7Q8WWI1 1683 aa16.67■□□□□ 0.26
LMO3-228ENST00000541846 EIF4A2Q14240 407 aaKnown RBP16.67■□□□□ 0.26
LMO3-228ENST00000541846 CHRNA2Q15822 529 aa16.67■□□□□ 0.26
LMO3-228ENST00000541846 YTHDC1Q96MU7 727 aaKnown RBP16.67■□□□□ 0.26
LMO3-228ENST00000541846 NUDCQ9Y266 331 aa16.67■□□□□ 0.26
LMO3-228ENST00000541846 U2SURPO15042 1029 aaKnown RBP16.66■□□□□ 0.26
LMO3-228ENST00000541846 BLMP54132 1417 aaPredicted RBP16.66■□□□□ 0.26
LMO3-228ENST00000541846 FNBP4Q8N3X1 1017 aaPredicted RBP16.66■□□□□ 0.26
LMO3-228ENST00000541846 U2AF1L5P0DN76 240 aaPredicted RBP16.64■□□□□ 0.25
LMO3-228ENST00000541846 U2AF1Q01081 240 aaKnown RBP eCLIP16.64■□□□□ 0.25
LMO3-228ENST00000541846 COL14A1Q05707 1796 aaKnown RBP16.64■□□□□ 0.25
LMO3-228ENST00000541846 FAM208AQ9UK61 1670 aaKnown RBP16.63■□□□□ 0.25
LMO3-228ENST00000541846 SLIT2O94813 1529 aa16.63■□□□□ 0.25
LMO3-228ENST00000541846 CAMTA1Q9Y6Y1 1673 aa16.62■□□□□ 0.25
LMO3-228ENST00000541846 LTV1Q96GA3 475 aaPredicted RBP16.62■□□□□ 0.25
LMO3-228ENST00000541846 NGLY1Q96IV0 654 aa16.62■□□□□ 0.25
LMO3-228ENST00000541846 BTG4Q9NY30 223 aa16.62■□□□□ 0.25
LMO3-228ENST00000541846 C8orf37Q96NL8 207 aa16.61■□□□□ 0.25
LMO3-228ENST00000541846 PLCH1Q4KWH8 1693 aa16.61■□□□□ 0.25
LMO3-228ENST00000541846 ERBB3P21860 1342 aa16.61■□□□□ 0.25
LMO3-228ENST00000541846 CCDC146Q8IYE0 955 aa16.6■□□□□ 0.25
LMO3-228ENST00000541846 ANKRD24Q8TF21 1146 aa16.6■□□□□ 0.25
LMO3-228ENST00000541846 IGSF1Q8N6C5 1336 aa16.6■□□□□ 0.25
LMO3-228ENST00000541846 BCL9LQ86UU0 1499 aa16.6■□□□□ 0.25
LMO3-228ENST00000541846 HMOX1P09601 288 aa16.59■□□□□ 0.25
LMO3-228ENST00000541846 HNRNPUQ00839 825 aaKnown RBP eCLIP16.59■□□□□ 0.25
LMO3-228ENST00000541846 MEX3CQ5U5Q3 659 aaKnown RBP16.59■□□□□ 0.25
LMO3-228ENST00000541846 UNC5CLQ8IV45 518 aa16.59■□□□□ 0.25
LMO3-228ENST00000541846 EYA1Q99502 592 aa16.59■□□□□ 0.25
LMO3-228ENST00000541846 COL5A2P05997 1499 aaPredicted RBP16.59■□□□□ 0.25
LMO3-228ENST00000541846 RSPH6AQ9H0K4 717 aa16.58■□□□□ 0.24
LMO3-228ENST00000541846 WDR17Q8IZU2 1322 aa16.58■□□□□ 0.24
LMO3-228ENST00000541846 FCHSD2O94868 740 aa16.57■□□□□ 0.24
LMO3-228ENST00000541846 AEBP1Q8IUX7 1158 aa16.57■□□□□ 0.24
LMO3-228ENST00000541846 RUNDC1Q96C34 613 aa16.57■□□□□ 0.24
LMO3-228ENST00000541846 NCAPD2Q15021 1401 aa16.56■□□□□ 0.24
LMO3-228ENST00000541846 KDRP35968 1356 aa16.56■□□□□ 0.24
LMO3-228ENST00000541846 AFF2P51816 1311 aa16.56■□□□□ 0.24
LMO3-228ENST00000541846 SENP3-EIF4A1A0A087X0R7 540 aa16.56■□□□□ 0.24
LMO3-228ENST00000541846 EVA1CP58658 441 aa16.56■□□□□ 0.24
LMO3-228ENST00000541846 NBPF6Q5VWK0 638 aa16.56■□□□□ 0.24
LMO3-228ENST00000541846 SULT6B1Q6IMI4 303 aa16.56■□□□□ 0.24
LMO3-228ENST00000541846 LARP1Q6PKG0 1096 aaKnown RBP16.56■□□□□ 0.24
LMO3-228ENST00000541846 NBPF4Q96M43 638 aa16.56■□□□□ 0.24
LMO3-228ENST00000541846 PLEKHF1Q96S99 279 aa16.56■□□□□ 0.24
LMO3-228ENST00000541846 NRAPQ86VF7 1730 aa16.56■□□□□ 0.24
LMO3-228ENST00000541846 NWD2Q9ULI1 1742 aa16.56■□□□□ 0.24
LMO3-228ENST00000541846 PRKAR2BP31323 418 aa16.55■□□□□ 0.24
LMO3-228ENST00000541846 VPS72Q15906 364 aa16.55■□□□□ 0.24
LMO3-228ENST00000541846 CARD10Q9BWT7 1032 aa16.55■□□□□ 0.24
LMO3-228ENST00000541846 USP21Q9UK80 565 aa16.55■□□□□ 0.24
LMO3-228ENST00000541846 USHBP1Q8N6Y0 703 aa16.54■□□□□ 0.24
LMO3-228ENST00000541846 PNNQ9H307 717 aaKnown RBP16.54■□□□□ 0.24
LMO3-228ENST00000541846 DLG5Q8TDM6 1919 aa16.54■□□□□ 0.24
LMO3-228ENST00000541846 APAF1O14727 1248 aa16.53■□□□□ 0.24
LMO3-228ENST00000541846 CSB-PGBD3P0DP91 1061 aa16.53■□□□□ 0.24
LMO3-228ENST00000541846 STRN4Q9NRL3 753 aa16.53■□□□□ 0.24
LMO3-228ENST00000541846 CRB1P82279 1406 aa16.53■□□□□ 0.24
LMO3-228ENST00000541846 SPATA31A5Q5VU36 1347 aa16.52■□□□□ 0.24
LMO3-228ENST00000541846 SPATA31A7Q8IWB4 1347 aa16.52■□□□□ 0.24
LMO3-228ENST00000541846 MAPK8IP3Q9UPT6 1336 aa16.52■□□□□ 0.24
LMO3-228ENST00000541846 TCP11L2Q8N4U5 519 aa16.52■□□□□ 0.24
LMO3-228ENST00000541846 NLRP2Q9NX02 1062 aa16.52■□□□□ 0.24
LMO3-228ENST00000541846 SPATA31A1Q5TZJ5 1347 aa16.51■□□□□ 0.23
LMO3-228ENST00000541846 ZBED9Q6R2W3 1325 aa16.51■□□□□ 0.23
LMO3-228ENST00000541846 ZNF772Q68DY9 489 aaPredicted RBP16.51■□□□□ 0.23
LMO3-228ENST00000541846 TOM1L2Q6ZVM7 507 aa16.51■□□□□ 0.23
LMO3-228ENST00000541846 RGS17Q9UGC6 210 aaPredicted RBP16.51■□□□□ 0.23
LMO3-228ENST00000541846 ATRNO75882 1429 aa16.51■□□□□ 0.23
LMO3-228ENST00000541846 PHACTR3Q96KR7 559 aa16.5■□□□□ 0.23
LMO3-228ENST00000541846 TRPC5Q9UL62 973 aaPredicted RBP16.5■□□□□ 0.23
LMO3-228ENST00000541846 THRAP3Q9Y2W1 955 aaKnown RBP16.5■□□□□ 0.23
LMO3-228ENST00000541846 NEFMP07197 916 aa16.49■□□□□ 0.23
LMO3-228ENST00000541846 QTRT2Q9H974 415 aaKnown RBP16.49■□□□□ 0.23
LMO3-228ENST00000541846 RRP7AQ9Y3A4 280 aaKnown RBP16.49■□□□□ 0.23
LMO3-228ENST00000541846 SALL2Q9Y467 1007 aaPredicted RBP16.49■□□□□ 0.23
LMO3-228ENST00000541846 ONECUT3O60422 494 aaPredicted RBP16.48■□□□□ 0.23
LMO3-228ENST00000541846 TMPOP42166 694 aaKnown RBP16.48■□□□□ 0.23
LMO3-228ENST00000541846 BARGINQ6ZT62 677 aa16.48■□□□□ 0.23
LMO3-228ENST00000541846 GJD4Q96KN9 370 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms