RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 PANK1Q8TE04 598 aa12.69□□□□□ -0.38
GABRB3-204ENST00000541819 STAC3Q96MF2 364 aa12.69□□□□□ -0.38
GABRB3-204ENST00000541819 FIBPO43427 364 aa12.68□□□□□ -0.38
GABRB3-204ENST00000541819 CENPHQ9H3R5 247 aa12.68□□□□□ -0.38
GABRB3-204ENST00000541819 CCDC91Q7Z6B0 441 aa12.68□□□□□ -0.38
GABRB3-204ENST00000541819 HMGB2P26583 209 aaKnown RBP12.68□□□□□ -0.38
GABRB3-204ENST00000541819 SSR1P43307 286 aaKnown RBP12.67□□□□□ -0.38
GABRB3-204ENST00000541819 PNISRQ8TF01 805 aaKnown RBP12.67□□□□□ -0.38
GABRB3-204ENST00000541819 CCDC192P0DO97 292 aa12.67□□□□□ -0.38
GABRB3-204ENST00000541819 TMOD2Q9NZR1 351 aa12.67□□□□□ -0.38
GABRB3-204ENST00000541819 WDHD1O75717 1129 aaPredicted RBP12.67□□□□□ -0.38
GABRB3-204ENST00000541819 ME1P48163 572 aa12.67□□□□□ -0.38
GABRB3-204ENST00000541819 PROSER2Q86WR7 435 aaPredicted RBP12.67□□□□□ -0.38
GABRB3-204ENST00000541819 OSCARQ8IYS5 282 aa12.67□□□□□ -0.38
GABRB3-204ENST00000541819 TAF4BQ92750 862 aa12.67□□□□□ -0.38
GABRB3-204ENST00000541819 STK3Q13188 491 aa12.67□□□□□ -0.38
GABRB3-204ENST00000541819 TNIP1Q15025 636 aa12.67□□□□□ -0.38
GABRB3-204ENST00000541819 TNMDQ9H2S6 317 aa12.67□□□□□ -0.38
GABRB3-204ENST00000541819 PRPF40AO75400 957 aaKnown RBP12.67□□□□□ -0.38
GABRB3-204ENST00000541819 CETN2P41208 172 aa12.67□□□□□ -0.38
GABRB3-204ENST00000541819 SPG7Q9UQ90 795 aa12.67□□□□□ -0.38
GABRB3-204ENST00000541819 NUTM2BA6NNL0 878 aaPredicted RBP12.66□□□□□ -0.38
GABRB3-204ENST00000541819 NUTM2EB1AL46 878 aaPredicted RBP12.66□□□□□ -0.38
GABRB3-204ENST00000541819 PPP4R3AQ6IN85 833 aa12.66□□□□□ -0.38
GABRB3-204ENST00000541819 NUTM2AQ8IVF1 878 aaPredicted RBP12.66□□□□□ -0.38
GABRB3-204ENST00000541819 SPC24Q8NBT2 197 aa12.66□□□□□ -0.38
GABRB3-204ENST00000541819 HMGN5P82970 282 aaKnown RBP12.66□□□□□ -0.38
GABRB3-204ENST00000541819 UBAC1Q9BSL1 405 aa12.66□□□□□ -0.38
GABRB3-204ENST00000541819 GCC1Q96CN9 775 aa12.66□□□□□ -0.38
GABRB3-204ENST00000541819 TOM1L2Q6ZVM7 507 aa12.66□□□□□ -0.38
GABRB3-204ENST00000541819 SCLT1Q96NL6 688 aa12.66□□□□□ -0.38
GABRB3-204ENST00000541819 TDO2P48775 406 aa12.65□□□□□ -0.38
GABRB3-204ENST00000541819 CEP57L1Q8IYX8 460 aa12.65□□□□□ -0.38
GABRB3-204ENST00000541819 PPP1R12BO60237 982 aaPredicted RBP12.65□□□□□ -0.38
GABRB3-204ENST00000541819 RRBP1Q9P2E9 1410 aaKnown RBP12.65□□□□□ -0.38
GABRB3-204ENST00000541819 ANAPC15P60006 121 aa12.65□□□□□ -0.38
GABRB3-204ENST00000541819 WASF1Q92558 559 aa12.65□□□□□ -0.38
GABRB3-204ENST00000541819 CNTLNQ9NXG0 1405 aa12.64□□□□□ -0.39
GABRB3-204ENST00000541819 FANCIQ9NVI1 1328 aa12.64□□□□□ -0.39
GABRB3-204ENST00000541819 TRAK2O60296 914 aa12.64□□□□□ -0.39
GABRB3-204ENST00000541819 CCT4P50991 539 aaKnown RBP12.64□□□□□ -0.39
GABRB3-204ENST00000541819 STAMBPO95630 424 aa12.64□□□□□ -0.39
GABRB3-204ENST00000541819 FAM193AP78312 1265 aa12.64□□□□□ -0.39
GABRB3-204ENST00000541819 TWISTNBQ3B726 338 aaPredicted RBP12.64□□□□□ -0.39
GABRB3-204ENST00000541819 SIL1Q9H173 461 aa12.64□□□□□ -0.39
GABRB3-204ENST00000541819 RAI14Q9P0K7 980 aa12.64□□□□□ -0.39
GABRB3-204ENST00000541819 DDX54Q8TDD1 881 aaKnown RBP12.63□□□□□ -0.39
GABRB3-204ENST00000541819 CTNNA3Q9UI47 895 aa12.63□□□□□ -0.39
GABRB3-204ENST00000541819 HDGFL1Q5TGJ6 251 aa12.63□□□□□ -0.39
GABRB3-204ENST00000541819 SLC26A8Q96RN1 970 aa12.63□□□□□ -0.39
GABRB3-204ENST00000541819 LRRCC1Q9C099 1032 aa12.63□□□□□ -0.39
GABRB3-204ENST00000541819 SPDYE4A6NLX3 237 aa12.63□□□□□ -0.39
GABRB3-204ENST00000541819 KRT85P78386 507 aa12.63□□□□□ -0.39
GABRB3-204ENST00000541819 USP5P45974 858 aa12.63□□□□□ -0.39
GABRB3-204ENST00000541819 KIAA1328Q86T90 577 aa12.63□□□□□ -0.39
GABRB3-204ENST00000541819 ZNF397Q8NF99 534 aaPredicted RBP12.63□□□□□ -0.39
GABRB3-204ENST00000541819 CEP131Q9UPN4 1083 aa12.63□□□□□ -0.39
GABRB3-204ENST00000541819 LRRFIP2Q9Y608 721 aaKnown RBP12.63□□□□□ -0.39
GABRB3-204ENST00000541819 WDR33Q9C0J8 1336 aaKnown RBP12.63□□□□□ -0.39
GABRB3-204ENST00000541819 EPB41L2O43491 1005 aaKnown RBP12.62□□□□□ -0.39
GABRB3-204ENST00000541819 TMEM87AQ8NBN3 555 aa12.62□□□□□ -0.39
GABRB3-204ENST00000541819 EIF5P55010 431 aaKnown RBP12.62□□□□□ -0.39
GABRB3-204ENST00000541819 FKBP4Q02790 459 aaKnown RBP eCLIP12.62□□□□□ -0.39
GABRB3-204ENST00000541819 PRKAR2BP31323 418 aa12.61□□□□□ -0.39
GABRB3-204ENST00000541819 IGHMBP2P38935 993 aaKnown RBP12.61□□□□□ -0.39
GABRB3-204ENST00000541819 NFKBIBQ15653 356 aa12.61□□□□□ -0.39
GABRB3-204ENST00000541819 ZNF287Q9HBT7 754 aa12.61□□□□□ -0.39
GABRB3-204ENST00000541819 SRCIN1Q9C0H9 1055 aa12.61□□□□□ -0.39
GABRB3-204ENST00000541819 FAM177A1Q8N128 213 aaPredicted RBP12.61□□□□□ -0.39
GABRB3-204ENST00000541819 CCDC148Q8NFR7 591 aa12.61□□□□□ -0.39
GABRB3-204ENST00000541819 SMTNL1A8MU46 457 aa12.61□□□□□ -0.39
GABRB3-204ENST00000541819 USP8P40818 1118 aa12.61□□□□□ -0.39
GABRB3-204ENST00000541819 SEC63Q9UGP8 760 aaKnown RBP12.61□□□□□ -0.39
GABRB3-204ENST00000541819 FYCO1Q9BQS8 1478 aa12.6□□□□□ -0.39
GABRB3-204ENST00000541819 MYL6BP14649 208 aa12.6□□□□□ -0.39
GABRB3-204ENST00000541819 C1orf115Q9H7X2 142 aa12.6□□□□□ -0.39
GABRB3-204ENST00000541819 LRP2BPQ9P2M1 347 aa12.6□□□□□ -0.39
GABRB3-204ENST00000541819 SLC4A2P04920 1241 aa12.6□□□□□ -0.39
GABRB3-204ENST00000541819 MTHFSP49914 203 aa12.6□□□□□ -0.39
GABRB3-204ENST00000541819 LARP1BQ659C4 914 aaKnown RBP12.6□□□□□ -0.39
GABRB3-204ENST00000541819 MYOM3Q5VTT5 1437 aa12.6□□□□□ -0.39
GABRB3-204ENST00000541819 TXNDC2Q86VQ3 553 aa12.6□□□□□ -0.39
GABRB3-204ENST00000541819 CCDC150Q8NCX0 1101 aa12.6□□□□□ -0.39
GABRB3-204ENST00000541819 CFAP45Q9UL16 551 aa12.6□□□□□ -0.39
GABRB3-204ENST00000541819 ZNF530Q6P9A1 599 aaPredicted RBP12.59□□□□□ -0.39
GABRB3-204ENST00000541819 SPATA32Q96LK8 384 aa12.59□□□□□ -0.39
GABRB3-204ENST00000541819 TSG101Q99816 390 aa12.59□□□□□ -0.39
GABRB3-204ENST00000541819 MAP4K4O95819 1239 aaPredicted RBP12.59□□□□□ -0.39
GABRB3-204ENST00000541819 AACSQ86V21 672 aa12.59□□□□□ -0.39
GABRB3-204ENST00000541819 CHMP4BP1P59074 171 aa12.59□□□□□ -0.39
GABRB3-204ENST00000541819 GRIPAP1Q4V328 841 aa12.59□□□□□ -0.39
GABRB3-204ENST00000541819 DHX37Q8IY37 1157 aaKnown RBP12.59□□□□□ -0.39
GABRB3-204ENST00000541819 ZSCAN31Q96LW9 406 aaPredicted RBP12.59□□□□□ -0.39
GABRB3-204ENST00000541819 EXOSC9Q06265 439 aaKnown RBP12.59□□□□□ -0.39
GABRB3-204ENST00000541819 BLOC1S2Q6QNY1 142 aa12.59□□□□□ -0.39
GABRB3-204ENST00000541819 PDRG1Q9NUG6 133 aa12.59□□□□□ -0.39
GABRB3-204ENST00000541819 MAP2K1Q02750 393 aaPredicted RBP12.58□□□□□ -0.39
GABRB3-204ENST00000541819 SCAPERQ9BY12 1400 aa12.58□□□□□ -0.4
GABRB3-204ENST00000541819 KRT32Q14532 448 aa12.58□□□□□ -0.4
GABRB3-204ENST00000541819 PDZRN3Q9UPQ7 1066 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms