RNA–Protein interactions for RNA: ENST00000541802.1

C12orf56-204, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 3

Gene C12orf56, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-204ENST00000541802 SH3RF1Q7Z6J0 888 aa11.34□□□□□ -0.59
C12orf56-204ENST00000541802 ADAM32Q8TC27 787 aa11.34□□□□□ -0.59
C12orf56-204ENST00000541802 RC3H1Q5TC82 1133 aaKnown RBP11.32□□□□□ -0.6
C12orf56-204ENST00000541802 PCDHB9Q9Y5E1 797 aa11.31□□□□□ -0.6
C12orf56-204ENST00000541802 EIF4G2P78344 907 aaKnown RBP eCLIP11.3□□□□□ -0.6
C12orf56-204ENST00000541802 HDGFL1Q5TGJ6 251 aa11.3□□□□□ -0.6
C12orf56-204ENST00000541802 EHBP1Q8NDI1 1231 aa11.3□□□□□ -0.6
C12orf56-204ENST00000541802 ERFEQ4G0M1 354 aa11.29□□□□□ -0.6
C12orf56-204ENST00000541802 LCE2CQ5TA81 110 aa11.29□□□□□ -0.6
C12orf56-204ENST00000541802 ADAMTS19Q8TE59 1207 aa11.29□□□□□ -0.6
C12orf56-204ENST00000541802 GLMNQ92990 594 aa11.29□□□□□ -0.6
C12orf56-204ENST00000541802 TERTO14746 1132 aaKnown RBP11.28□□□□□ -0.6
C12orf56-204ENST00000541802 VARSP26640 1264 aaKnown RBP11.28□□□□□ -0.6
C12orf56-204ENST00000541802 SEMA3FQ13275 785 aa11.28□□□□□ -0.6
C12orf56-204ENST00000541802 CALR3Q96L12 384 aaKnown RBP11.28□□□□□ -0.6
C12orf56-204ENST00000541802 C1orf115Q9H7X2 142 aa11.28□□□□□ -0.6
C12orf56-204ENST00000541802 DZIP3Q86Y13 1208 aaKnown RBP11.27□□□□□ -0.61
C12orf56-204ENST00000541802 C1QTNF2Q9BXJ5 285 aa11.27□□□□□ -0.61
C12orf56-204ENST00000541802 ALG2Q9H553 416 aa11.27□□□□□ -0.61
C12orf56-204ENST00000541802 WNT7AO00755 349 aa11.26□□□□□ -0.61
C12orf56-204ENST00000541802 FAM174AQ8TBP5 190 aa11.26□□□□□ -0.61
C12orf56-204ENST00000541802 MRGPRX2Q96LB1 330 aa11.26□□□□□ -0.61
C12orf56-204ENST00000541802 SNRPBP14678 240 aaKnown RBP11.25□□□□□ -0.61
C12orf56-204ENST00000541802 SOX11P35716 441 aa11.25□□□□□ -0.61
C12orf56-204ENST00000541802 SLC10A4Q96EP9 437 aa11.25□□□□□ -0.61
C12orf56-204ENST00000541802 LOC100996750A0A140TA64 210 aa11.24□□□□□ -0.61
C12orf56-204ENST00000541802 TTC24A2A3L6 582 aaPredicted RBP11.24□□□□□ -0.61
C12orf56-204ENST00000541802 ARID5BQ14865 1188 aa11.24□□□□□ -0.61
C12orf56-204ENST00000541802 KRTAP4-6Q9BYQ5 205 aa11.24□□□□□ -0.61
C12orf56-204ENST00000541802 ATP13A2Q9NQ11 1180 aa11.24□□□□□ -0.61
C12orf56-204ENST00000541802 TRMT44Q8IYL2 757 aaKnown RBP11.22□□□□□ -0.61
C12orf56-204ENST00000541802 TLL2Q9Y6L7 1015 aa11.22□□□□□ -0.61
C12orf56-204ENST00000541802 SIAH2O43255 324 aa11.21□□□□□ -0.61
C12orf56-204ENST00000541802 CEP126Q9P2H0 1117 aa11.21□□□□□ -0.61
C12orf56-204ENST00000541802 MCCD1P59942 119 aaPredicted RBP11.2□□□□□ -0.62
C12orf56-204ENST00000541802 ZNF592Q92610 1267 aa11.2□□□□□ -0.62
C12orf56-204ENST00000541802 TRIM47Q96LD4 638 aa11.2□□□□□ -0.62
C12orf56-204ENST00000541802 SENP2Q9HC62 589 aa11.2□□□□□ -0.62
C12orf56-204ENST00000541802 FAM181BA6NEQ2 426 aa11.19□□□□□ -0.62
C12orf56-204ENST00000541802 VASH1Q7L8A9 365 aaPredicted RBP11.19□□□□□ -0.62
C12orf56-204ENST00000541802 CCDC82Q8N4S0 544 aa11.19□□□□□ -0.62
C12orf56-204ENST00000541802 ARID3AQ99856 593 aa11.19□□□□□ -0.62
C12orf56-204ENST00000541802 GIGYF1O75420 1035 aaPredicted RBP11.18□□□□□ -0.62
C12orf56-204ENST00000541802 SMPD1P17405 629 aa11.18□□□□□ -0.62
C12orf56-204ENST00000541802 KCTD15Q96SI1 283 aaPredicted RBP11.18□□□□□ -0.62
C12orf56-204ENST00000541802 RAB15P59190 212 aa11.17□□□□□ -0.62
C12orf56-204ENST00000541802 NBPF20Q3BBV1 942 aa11.17□□□□□ -0.62
C12orf56-204ENST00000541802 CCDC97Q96F63 343 aaPredicted RBP11.17□□□□□ -0.62
C12orf56-204ENST00000541802 CDK15Q96Q40 435 aa11.17□□□□□ -0.62
C12orf56-204ENST00000541802 CDV3Q9UKY7 258 aaKnown RBP11.17□□□□□ -0.62
C12orf56-204ENST00000541802 PIK3CDO00329 1044 aa11.16□□□□□ -0.62
C12orf56-204ENST00000541802 ALDH1A1P00352 501 aa11.16□□□□□ -0.62
C12orf56-204ENST00000541802 SLFNL1Q499Z3 407 aa11.16□□□□□ -0.62
C12orf56-204ENST00000541802 SNIP1Q8TAD8 396 aaKnown RBP11.16□□□□□ -0.62
C12orf56-204ENST00000541802 UCN2Q96RP3 112 aa11.16□□□□□ -0.62
C12orf56-204ENST00000541802 GRM5P41594 1212 aa11.15□□□□□ -0.62
C12orf56-204ENST00000541802 MAP4K5Q9Y4K4 846 aa11.15□□□□□ -0.62
C12orf56-204ENST00000541802 MPNDQ8N594 471 aa11.14□□□□□ -0.63
C12orf56-204ENST00000541802 SERPINA10Q9UK55 444 aa11.14□□□□□ -0.63
C12orf56-204ENST00000541802 FSHRP23945 695 aa11.13□□□□□ -0.63
C12orf56-204ENST00000541802 TBC1D9Q6ZT07 1266 aa11.13□□□□□ -0.63
C12orf56-204ENST00000541802 RNF135Q8IUD6 432 aa11.13□□□□□ -0.63
C12orf56-204ENST00000541802 PHTF2Q8N3S3 785 aa11.13□□□□□ -0.63
C12orf56-204ENST00000541802 ESPNB1AK53 854 aa11.12□□□□□ -0.63
C12orf56-204ENST00000541802 J3QL48 77 aa11.12□□□□□ -0.63
C12orf56-204ENST00000541802 ADH1CP00326 375 aa11.12□□□□□ -0.63
C12orf56-204ENST00000541802 TSGA10IPQ3SY00 556 aa11.12□□□□□ -0.63
C12orf56-204ENST00000541802 SLC16A10Q8TF71 515 aa11.12□□□□□ -0.63
C12orf56-204ENST00000541802 KIFC2Q96AC6 838 aa11.12□□□□□ -0.63
C12orf56-204ENST00000541802 PPP1R12CQ9BZL4 782 aa11.12□□□□□ -0.63
C12orf56-204ENST00000541802 TFIP11Q9UBB9 837 aaKnown RBP11.12□□□□□ -0.63
C12orf56-204ENST00000541802 PALM3A6NDB9 673 aaPredicted RBP11.11□□□□□ -0.63
C12orf56-204ENST00000541802 SKIP12755 728 aa11.11□□□□□ -0.63
C12orf56-204ENST00000541802 INTS6LQ5JSJ4 861 aaKnown RBP11.11□□□□□ -0.63
C12orf56-204ENST00000541802 RNF20Q5VTR2 975 aa11.11□□□□□ -0.63
C12orf56-204ENST00000541802 WASF2Q9Y6W5 498 aa11.11□□□□□ -0.63
C12orf56-204ENST00000541802 NR5A1Q13285 461 aa11.09□□□□□ -0.63
C12orf56-204ENST00000541802 CCDC85AQ96PX6 553 aaPredicted RBP11.09□□□□□ -0.63
C12orf56-204ENST00000541802 ATP9BO43861 1147 aa11.08□□□□□ -0.64
C12orf56-204ENST00000541802 NR3C2P08235 984 aa11.08□□□□□ -0.64
C12orf56-204ENST00000541802 SEPT12Q8IYM1 358 aa11.08□□□□□ -0.64
C12orf56-204ENST00000541802 ZSCAN1Q8NBB4 408 aa11.08□□□□□ -0.64
C12orf56-204ENST00000541802 PLPP7Q8NBV4 271 aa11.08□□□□□ -0.64
C12orf56-204ENST00000541802 ERVH48-1M5A8F1 160 aa11.07□□□□□ -0.64
C12orf56-204ENST00000541802 RFX1P22670 979 aa11.07□□□□□ -0.64
C12orf56-204ENST00000541802 LMOD1P29536 600 aaPredicted RBP11.07□□□□□ -0.64
C12orf56-204ENST00000541802 NNTQ13423 1086 aa11.07□□□□□ -0.64
C12orf56-204ENST00000541802 DEPDC4Q8N2C3 294 aa11.07□□□□□ -0.64
C12orf56-204ENST00000541802 NFATC2IPQ8NCF5 419 aa11.07□□□□□ -0.64
C12orf56-204ENST00000541802 HPS1Q92902 700 aa11.07□□□□□ -0.64
C12orf56-204ENST00000541802 PCDHB11Q9Y5F2 797 aa11.07□□□□□ -0.64
C12orf56-204ENST00000541802 LORP23490 312 aaPredicted RBP11.06□□□□□ -0.64
C12orf56-204ENST00000541802 GMPRP36959 345 aa11.06□□□□□ -0.64
C12orf56-204ENST00000541802 CFAP70Q5T0N1 1121 aa11.06□□□□□ -0.64
C12orf56-204ENST00000541802 CCDC116Q8IYX3 515 aa11.06□□□□□ -0.64
C12orf56-204ENST00000541802 CDCA7Q9BWT1 371 aaPredicted RBP11.06□□□□□ -0.64
C12orf56-204ENST00000541802 TMPRSS4Q9NRS4 437 aa11.06□□□□□ -0.64
C12orf56-204ENST00000541802 DOLKQ9UPQ8 538 aa11.06□□□□□ -0.64
C12orf56-204ENST00000541802 MAFBQ9Y5Q3 323 aaPredicted RBP11.06□□□□□ -0.64
C12orf56-204ENST00000541802 USP17L5A8MUK1 530 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms