RNA–Protein interactions for RNA: ENST00000541802.1

C12orf56-204, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 3

Gene C12orf56, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-204ENST00000541802 AEBP2Q6ZN18 517 aaPredicted RBP32■■■□□ 2.71
C12orf56-204ENST00000541802 CHIC1Q5VXU3 224 aa29.91■■■□□ 2.38
C12orf56-204ENST00000541802 SENP3Q9H4L4 574 aaPredicted RBP27.39■■□□□ 1.98
C12orf56-204ENST00000541802 PHF23Q9BUL5 403 aaPredicted RBP26.97■■□□□ 1.91
C12orf56-204ENST00000541802 FOXD1Q16676 465 aa25.61■■□□□ 1.69
C12orf56-204ENST00000541802 POTEDQ86YR6 584 aa24.63■■□□□ 1.53
C12orf56-204ENST00000541802 MSH5O43196 834 aa24.2■■□□□ 1.46
C12orf56-204ENST00000541802 PIAS4Q8N2W9 510 aaPredicted RBP23.79■■□□□ 1.4
C12orf56-204ENST00000541802 PLPPR3Q6T4P5 718 aa23.56■■□□□ 1.36
C12orf56-204ENST00000541802 PPP6R1Q9UPN7 881 aa23.49■■□□□ 1.35
C12orf56-204ENST00000541802 ADRA2BP18089 450 aa23.39■■□□□ 1.33
C12orf56-204ENST00000541802 MAPK8IP2Q13387 824 aaPredicted RBP21.67■■□□□ 1.06
C12orf56-204ENST00000541802 DMRT2Q9Y5R5 561 aa21.62■■□□□ 1.05
C12orf56-204ENST00000541802 SCAF1Q9H7N4 1312 aaKnown RBP21.41■■□□□ 1.02
C12orf56-204ENST00000541802 CACNB1Q02641 598 aaPredicted RBP21.15■□□□□ 0.98
C12orf56-204ENST00000541802 DCAF8L1A6NGE4 600 aa20.81■□□□□ 0.92
C12orf56-204ENST00000541802 HOXD11P31277 338 aaPredicted RBP20.6■□□□□ 0.89
C12orf56-204ENST00000541802 PPP4R3CPQ6ZMV5 832 aa20.58■□□□□ 0.89
C12orf56-204ENST00000541802 RNF39Q9H2S5 420 aa20.58■□□□□ 0.89
C12orf56-204ENST00000541802 CNKSR2Q8WXI2 1034 aa20.33■□□□□ 0.85
C12orf56-204ENST00000541802 RNF216Q9NWF9 866 aaPredicted RBP20.3■□□□□ 0.84
C12orf56-204ENST00000541802 C1QBPQ07021 282 aaKnown RBP20.25■□□□□ 0.83
C12orf56-204ENST00000541802 KCNA4P22459 653 aa20.11■□□□□ 0.81
C12orf56-204ENST00000541802 DNAJC5BQ9UF47 199 aa19.99■□□□□ 0.79
C12orf56-204ENST00000541802 NCBP3Q53F19 620 aaKnown RBP19.8■□□□□ 0.76
C12orf56-204ENST00000541802 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.65■□□□□ 0.74
C12orf56-204ENST00000541802 NPM3O75607 178 aaKnown RBP19.54■□□□□ 0.72
C12orf56-204ENST00000541802 POTEHQ6S545 545 aa19.19■□□□□ 0.66
C12orf56-204ENST00000541802 SLC4A1APQ9BWU0 796 aaKnown RBP19.18■□□□□ 0.66
C12orf56-204ENST00000541802 U3KPZ7 1027 aaPredicted RBP19.15■□□□□ 0.66
C12orf56-204ENST00000541802 CAPN15O75808 1086 aa19.08■□□□□ 0.64
C12orf56-204ENST00000541802 DSG3P32926 999 aa19.08■□□□□ 0.64
C12orf56-204ENST00000541802 SPINK5Q9NQ38 1064 aaPredicted RBP19.06■□□□□ 0.64
C12orf56-204ENST00000541802 EHMT2Q96KQ7 1210 aa18.95■□□□□ 0.62
C12orf56-204ENST00000541802 TRHP20396 242 aaPredicted RBP18.63■□□□□ 0.57
C12orf56-204ENST00000541802 SLC4A2P04920 1241 aa18.6■□□□□ 0.57
C12orf56-204ENST00000541802 ABCB7O75027 752 aa18.58■□□□□ 0.56
C12orf56-204ENST00000541802 CSRNP3Q8WYN3 585 aa18.58■□□□□ 0.56
C12orf56-204ENST00000541802 APLP2Q06481 763 aa18.57■□□□□ 0.56
C12orf56-204ENST00000541802 ZNF219Q9P2Y4 722 aaPredicted RBP18.55■□□□□ 0.56
C12orf56-204ENST00000541802 ZBTB22O15209 634 aa18.51■□□□□ 0.55
C12orf56-204ENST00000541802 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.41■□□□□ 0.54
C12orf56-204ENST00000541802 HNRNPUL2Q1KMD3 747 aaKnown RBP18.41■□□□□ 0.54
C12orf56-204ENST00000541802 FOXD4L1Q9NU39 408 aa18.39■□□□□ 0.53
C12orf56-204ENST00000541802 SAMD1Q6SPF0 538 aaPredicted RBP18.27■□□□□ 0.52
C12orf56-204ENST00000541802 RBM42Q9BTD8 480 aaKnown RBP18.23■□□□□ 0.51
C12orf56-204ENST00000541802 CHRDL2Q6WN34 429 aa18.06■□□□□ 0.48
C12orf56-204ENST00000541802 MYCNP04198 464 aaPredicted RBP18.02■□□□□ 0.48
C12orf56-204ENST00000541802 POLA2Q14181 598 aa17.99■□□□□ 0.47
C12orf56-204ENST00000541802 SP7Q8TDD2 431 aaPredicted RBP17.71■□□□□ 0.43
C12orf56-204ENST00000541802 ATXN8OSP0DMR3 200 aa17.7■□□□□ 0.42
C12orf56-204ENST00000541802 AKT1S1Q96B36 256 aa17.68■□□□□ 0.42
C12orf56-204ENST00000541802 ATF5Q9Y2D1 282 aaPredicted RBP17.59■□□□□ 0.41
C12orf56-204ENST00000541802 ZBTB12Q9Y330 459 aaPredicted RBP17.56■□□□□ 0.4
C12orf56-204ENST00000541802 REM2Q8IYK8 340 aaPredicted RBP17.52■□□□□ 0.4
C12orf56-204ENST00000541802 PIP4P2Q8N4L2 257 aa17.51■□□□□ 0.39
C12orf56-204ENST00000541802 OSCARQ8IYS5 282 aa17.42■□□□□ 0.38
C12orf56-204ENST00000541802 HAX1O00165 279 aa17.38■□□□□ 0.37
C12orf56-204ENST00000541802 PITPNM1O00562 1244 aa17.34■□□□□ 0.37
C12orf56-204ENST00000541802 FXR2P51116 673 aaKnown RBP eCLIP17.3■□□□□ 0.36
C12orf56-204ENST00000541802 EVX2Q03828 476 aa17.1■□□□□ 0.33
C12orf56-204ENST00000541802 SPDYE2BA6NHP3 402 aa16.97■□□□□ 0.31
C12orf56-204ENST00000541802 SPDYE6P0CI01 402 aa16.97■□□□□ 0.31
C12orf56-204ENST00000541802 SPDYE2Q495Y8 402 aa16.97■□□□□ 0.31
C12orf56-204ENST00000541802 PRKAR2AP13861 404 aaKnown RBP16.9■□□□□ 0.3
C12orf56-204ENST00000541802 FBLN2P98095 1184 aa16.89■□□□□ 0.29
C12orf56-204ENST00000541802 CLEC11AQ9Y240 323 aa16.86■□□□□ 0.29
C12orf56-204ENST00000541802 SPDYE1Q8NFV5 336 aaPredicted RBP16.82■□□□□ 0.28
C12orf56-204ENST00000541802 MKRN4PQ13434 485 aaPredicted RBP16.81■□□□□ 0.28
C12orf56-204ENST00000541802 FKBP8Q14318 412 aa16.8■□□□□ 0.28
C12orf56-204ENST00000541802 C19orf67A6NJJ6 358 aa16.78■□□□□ 0.28
C12orf56-204ENST00000541802 GABBR2O75899 941 aa16.69■□□□□ 0.26
C12orf56-204ENST00000541802 ZNF692Q9BU19 519 aaPredicted RBP16.69■□□□□ 0.26
C12orf56-204ENST00000541802 SSUH2Q9Y2M2 353 aa16.66■□□□□ 0.26
C12orf56-204ENST00000541802 LHX8Q68G74 356 aa16.61■□□□□ 0.25
C12orf56-204ENST00000541802 CHADLQ6NUI6 762 aa16.59■□□□□ 0.25
C12orf56-204ENST00000541802 SPDYE4A6NLX3 237 aa16.54■□□□□ 0.24
C12orf56-204ENST00000541802 PRR29P0C7W0 189 aa16.49■□□□□ 0.23
C12orf56-204ENST00000541802 PABPN1Q86U42 306 aaKnown RBP eCLIP16.42■□□□□ 0.22
C12orf56-204ENST00000541802 CD44P16070 742 aaKnown RBP16.32■□□□□ 0.2
C12orf56-204ENST00000541802 POTEIP0CG38 1075 aa16.31■□□□□ 0.2
C12orf56-204ENST00000541802 FARP1Q9Y4F1 1045 aaPredicted RBP16.27■□□□□ 0.2
C12orf56-204ENST00000541802 PROM2Q8N271 834 aa16.24■□□□□ 0.19
C12orf56-204ENST00000541802 CLCN6P51797 869 aa16.21■□□□□ 0.19
C12orf56-204ENST00000541802 DCBLD2Q96PD2 775 aa16.13■□□□□ 0.17
C12orf56-204ENST00000541802 FBXO3Q9UK99 471 aa16.09■□□□□ 0.17
C12orf56-204ENST00000541802 PLSCR2Q9NRY7 297 aa16.06■□□□□ 0.16
C12orf56-204ENST00000541802 ZNF579Q8NAF0 562 aaKnown RBP16.02■□□□□ 0.16
C12orf56-204ENST00000541802 ZRANB1Q9UGI0 708 aa16.01■□□□□ 0.15
C12orf56-204ENST00000541802 CREBZFQ9NS37 354 aa15.92■□□□□ 0.14
C12orf56-204ENST00000541802 GALR2O43603 387 aaPredicted RBP15.89■□□□□ 0.13
C12orf56-204ENST00000541802 VASPP50552 380 aaPredicted RBP15.88■□□□□ 0.13
C12orf56-204ENST00000541802 STAG3Q9UJ98 1225 aa15.85■□□□□ 0.13
C12orf56-204ENST00000541802 OTUD5Q96G74 571 aa15.83■□□□□ 0.12
C12orf56-204ENST00000541802 POTEB2H3BUK9 544 aa15.77■□□□□ 0.12
C12orf56-204ENST00000541802 PAK3O75914 559 aaPredicted RBP15.75■□□□□ 0.11
C12orf56-204ENST00000541802 PHF12Q96QT6 1004 aa15.72■□□□□ 0.11
C12orf56-204ENST00000541802 IFNLR1Q8IU57 520 aaPredicted RBP15.71■□□□□ 0.11
C12orf56-204ENST00000541802 MIER1Q8N108 512 aa15.69■□□□□ 0.1
C12orf56-204ENST00000541802 RTN4Q9NQC3 1192 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms