RNA–Protein interactions for RNA: ENST00000541669.5

LDHC-207, Transcript of lactate dehydrogenase C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHC, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-207ENST00000541669 CCDC184Q52MB2 194 aa13.08□□□□□ -0.31
LDHC-207ENST00000541669 ARHGEF25Q86VW2 580 aa13.08□□□□□ -0.31
LDHC-207ENST00000541669 CFAP53Q96M91 514 aa13.08□□□□□ -0.31
LDHC-207ENST00000541669 PLCH1Q4KWH8 1693 aa13.08□□□□□ -0.32
LDHC-207ENST00000541669 AMPHP49418 695 aa13.08□□□□□ -0.32
LDHC-207ENST00000541669 RGPD1P0DJD0 1748 aa13.07□□□□□ -0.32
LDHC-207ENST00000541669 KIAA0232Q92628 1395 aa13.07□□□□□ -0.32
LDHC-207ENST00000541669 ZC3H6P61129 1189 aaKnown RBP13.06□□□□□ -0.32
LDHC-207ENST00000541669 FBXO41Q8TF61 875 aa13.06□□□□□ -0.32
LDHC-207ENST00000541669 BLMP54132 1417 aaPredicted RBP13.06□□□□□ -0.32
LDHC-207ENST00000541669 NWD2Q9ULI1 1742 aa13.06□□□□□ -0.32
LDHC-207ENST00000541669 HOXC9P31274 260 aa13.06□□□□□ -0.32
LDHC-207ENST00000541669 IP6K1Q92551 441 aa13.05□□□□□ -0.32
LDHC-207ENST00000541669 SPATA31A6Q5VVP1 1343 aa13.05□□□□□ -0.32
LDHC-207ENST00000541669 ZBTB7CA1YPR0 619 aa13.04□□□□□ -0.32
LDHC-207ENST00000541669 HSP90AB2PQ58FF8 381 aa13.04□□□□□ -0.32
LDHC-207ENST00000541669 CAMTA1Q9Y6Y1 1673 aa13.04□□□□□ -0.32
LDHC-207ENST00000541669 NRAPQ86VF7 1730 aa13.04□□□□□ -0.32
LDHC-207ENST00000541669 DIAPH1O60610 1272 aaKnown RBP13.03□□□□□ -0.32
LDHC-207ENST00000541669 PNISRQ8TF01 805 aaKnown RBP13.03□□□□□ -0.32
LDHC-207ENST00000541669 PRDM11Q9NQV5 511 aa13.03□□□□□ -0.32
LDHC-207ENST00000541669 IL13P35225 146 aa13.01□□□□□ -0.33
LDHC-207ENST00000541669 EIF4A2Q14240 407 aaKnown RBP13.01□□□□□ -0.33
LDHC-207ENST00000541669 CHRNA2Q15822 529 aa13.01□□□□□ -0.33
LDHC-207ENST00000541669 NUDCQ9Y266 331 aa13.01□□□□□ -0.33
LDHC-207ENST00000541669 LRP6O75581 1613 aa13.01□□□□□ -0.33
LDHC-207ENST00000541669 NUTM2BA6NNL0 878 aaPredicted RBP13.01□□□□□ -0.33
LDHC-207ENST00000541669 NUTM2EB1AL46 878 aaPredicted RBP13.01□□□□□ -0.33
LDHC-207ENST00000541669 WDR43Q15061 677 aaKnown RBP eCLIP13.01□□□□□ -0.33
LDHC-207ENST00000541669 NUTM2AQ8IVF1 878 aaPredicted RBP13.01□□□□□ -0.33
LDHC-207ENST00000541669 AXIN2Q9Y2T1 843 aa13.01□□□□□ -0.33
LDHC-207ENST00000541669 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.01□□□□□ -0.33
LDHC-207ENST00000541669 COL5A2P05997 1499 aaPredicted RBP13□□□□□ -0.33
LDHC-207ENST00000541669 FAM83GA6ND36 823 aa13□□□□□ -0.33
LDHC-207ENST00000541669 ERBB3P21860 1342 aa13□□□□□ -0.33
LDHC-207ENST00000541669 ADAMTS2O95450 1211 aa13□□□□□ -0.33
LDHC-207ENST00000541669 FAM9BQ8IZU0 186 aa12.99□□□□□ -0.33
LDHC-207ENST00000541669 WNK3Q9BYP7 1800 aa12.99□□□□□ -0.33
LDHC-207ENST00000541669 ANKRD24Q8TF21 1146 aa12.98□□□□□ -0.33
LDHC-207ENST00000541669 DLG5Q8TDM6 1919 aa12.98□□□□□ -0.33
LDHC-207ENST00000541669 U2SURPO15042 1029 aaKnown RBP12.98□□□□□ -0.33
LDHC-207ENST00000541669 LTV1Q96GA3 475 aaPredicted RBP12.98□□□□□ -0.33
LDHC-207ENST00000541669 SLIT2O94813 1529 aa12.98□□□□□ -0.33
LDHC-207ENST00000541669 U2AF1L5P0DN76 240 aaPredicted RBP12.97□□□□□ -0.33
LDHC-207ENST00000541669 U2AF1Q01081 240 aaKnown RBP eCLIP12.97□□□□□ -0.33
LDHC-207ENST00000541669 ADAMTS8Q9UP79 889 aa12.97□□□□□ -0.33
LDHC-207ENST00000541669 IGSF1Q8N6C5 1336 aa12.97□□□□□ -0.33
LDHC-207ENST00000541669 BTG4Q9NY30 223 aa12.96□□□□□ -0.33
LDHC-207ENST00000541669 VIRMAQ69YN4 1812 aaKnown RBP12.96□□□□□ -0.33
LDHC-207ENST00000541669 NCAPD2Q15021 1401 aa12.96□□□□□ -0.33
LDHC-207ENST00000541669 PARP4Q9UKK3 1724 aaKnown RBP12.96□□□□□ -0.34
LDHC-207ENST00000541669 KDRP35968 1356 aa12.96□□□□□ -0.34
LDHC-207ENST00000541669 WDR17Q8IZU2 1322 aa12.95□□□□□ -0.34
LDHC-207ENST00000541669 EYA1Q99502 592 aa12.95□□□□□ -0.34
LDHC-207ENST00000541669 CSB-PGBD3P0DP91 1061 aa12.94□□□□□ -0.34
LDHC-207ENST00000541669 MEX3CQ5U5Q3 659 aaKnown RBP12.94□□□□□ -0.34
LDHC-207ENST00000541669 C8orf37Q96NL8 207 aa12.94□□□□□ -0.34
LDHC-207ENST00000541669 CRB1P82279 1406 aa12.93□□□□□ -0.34
LDHC-207ENST00000541669 FCHSD2O94868 740 aa12.93□□□□□ -0.34
LDHC-207ENST00000541669 EVA1CP58658 441 aa12.93□□□□□ -0.34
LDHC-207ENST00000541669 NBPF6Q5VWK0 638 aa12.93□□□□□ -0.34
LDHC-207ENST00000541669 SULT6B1Q6IMI4 303 aa12.93□□□□□ -0.34
LDHC-207ENST00000541669 NBPF4Q96M43 638 aa12.93□□□□□ -0.34
LDHC-207ENST00000541669 RSPH6AQ9H0K4 717 aa12.93□□□□□ -0.34
LDHC-207ENST00000541669 PNNQ9H307 717 aaKnown RBP12.93□□□□□ -0.34
LDHC-207ENST00000541669 HMOX1P09601 288 aa12.93□□□□□ -0.34
LDHC-207ENST00000541669 NGLY1Q96IV0 654 aa12.93□□□□□ -0.34
LDHC-207ENST00000541669 STRN4Q9NRL3 753 aa12.93□□□□□ -0.34
LDHC-207ENST00000541669 PKD1L3Q7Z443 1732 aa12.92□□□□□ -0.34
LDHC-207ENST00000541669 FNBP4Q8N3X1 1017 aaPredicted RBP12.92□□□□□ -0.34
LDHC-207ENST00000541669 NLRP2Q9NX02 1062 aa12.92□□□□□ -0.34
LDHC-207ENST00000541669 BCL9LQ86UU0 1499 aa12.92□□□□□ -0.34
LDHC-207ENST00000541669 LARP1Q6PKG0 1096 aaKnown RBP12.91□□□□□ -0.34
LDHC-207ENST00000541669 TOM1L2Q6ZVM7 507 aa12.91□□□□□ -0.34
LDHC-207ENST00000541669 AEBP1Q8IUX7 1158 aa12.91□□□□□ -0.34
LDHC-207ENST00000541669 USHBP1Q8N6Y0 703 aa12.91□□□□□ -0.34
LDHC-207ENST00000541669 PLEKHF1Q96S99 279 aa12.91□□□□□ -0.34
LDHC-207ENST00000541669 CARD10Q9BWT7 1032 aa12.91□□□□□ -0.34
LDHC-207ENST00000541669 PRKAR2BP31323 418 aa12.9□□□□□ -0.34
LDHC-207ENST00000541669 UNC5CLQ8IV45 518 aa12.9□□□□□ -0.34
LDHC-207ENST00000541669 CCDC146Q8IYE0 955 aa12.9□□□□□ -0.34
LDHC-207ENST00000541669 RUNDC1Q96C34 613 aa12.9□□□□□ -0.34
LDHC-207ENST00000541669 PLEKHG2Q9H7P9 1386 aa12.9□□□□□ -0.34
LDHC-207ENST00000541669 SHANK3Q9BYB0 1731 aa12.9□□□□□ -0.35
LDHC-207ENST00000541669 MAPK8IP3Q9UPT6 1336 aa12.89□□□□□ -0.35
LDHC-207ENST00000541669 NEFMP07197 916 aa12.89□□□□□ -0.35
LDHC-207ENST00000541669 USP21Q9UK80 565 aa12.88□□□□□ -0.35
LDHC-207ENST00000541669 AFF2P51816 1311 aa12.88□□□□□ -0.35
LDHC-207ENST00000541669 MEGF6O75095 1541 aa12.88□□□□□ -0.35
LDHC-207ENST00000541669 KAT6BQ8WYB5 2073 aa12.87□□□□□ -0.35
LDHC-207ENST00000541669 VPS72Q15906 364 aa12.86□□□□□ -0.35
LDHC-207ENST00000541669 RAPGEF4Q8WZA2 1011 aa12.86□□□□□ -0.35
LDHC-207ENST00000541669 SPATA31A1Q5TZJ5 1347 aa12.86□□□□□ -0.35
LDHC-207ENST00000541669 SPATA31A5Q5VU36 1347 aa12.86□□□□□ -0.35
LDHC-207ENST00000541669 SPATA31A7Q8IWB4 1347 aa12.86□□□□□ -0.35
LDHC-207ENST00000541669 APAF1O14727 1248 aa12.86□□□□□ -0.35
LDHC-207ENST00000541669 HNRNPUQ00839 825 aaKnown RBP eCLIP12.86□□□□□ -0.35
LDHC-207ENST00000541669 TCP11L2Q8N4U5 519 aa12.86□□□□□ -0.35
LDHC-207ENST00000541669 PHACTR3Q96KR7 559 aa12.86□□□□□ -0.35
LDHC-207ENST00000541669 DAXXQ9UER7 740 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms