RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 AXIN2Q9Y2T1 843 aa18.85■□□□□ 0.61
SCARB1-207ENST00000541661 AKAP12Q02952 1782 aa18.85■□□□□ 0.61
SCARB1-207ENST00000541661 KCNQ2O43526 872 aa18.84■□□□□ 0.61
SCARB1-207ENST00000541661 ARHGEF25Q86VW2 580 aa18.84■□□□□ 0.61
SCARB1-207ENST00000541661 SPON1Q9HCB6 807 aa18.84■□□□□ 0.61
SCARB1-207ENST00000541661 BCL9O00512 1426 aa18.83■□□□□ 0.61
SCARB1-207ENST00000541661 RGPD5Q99666 1765 aa18.83■□□□□ 0.61
SCARB1-207ENST00000541661 TTC21BQ7Z4L5 1316 aa18.83■□□□□ 0.61
SCARB1-207ENST00000541661 CDCA7Q9BWT1 371 aaPredicted RBP18.83■□□□□ 0.6
SCARB1-207ENST00000541661 BCL11BQ9C0K0 894 aaPredicted RBP18.83■□□□□ 0.6
SCARB1-207ENST00000541661 CPSF1Q10570 1443 aaKnown RBP18.83■□□□□ 0.6
SCARB1-207ENST00000541661 KCNH5Q8NCM2 988 aa18.82■□□□□ 0.6
SCARB1-207ENST00000541661 MARCH10Q8NA82 808 aaPredicted RBP18.81■□□□□ 0.6
SCARB1-207ENST00000541661 TTC21AQ8NDW8 1320 aa18.8■□□□□ 0.6
SCARB1-207ENST00000541661 CARD10Q9BWT7 1032 aa18.8■□□□□ 0.6
SCARB1-207ENST00000541661 PTF1AQ7RTS3 328 aa18.79■□□□□ 0.6
SCARB1-207ENST00000541661 CASZ1Q86V15 1759 aa18.78■□□□□ 0.6
SCARB1-207ENST00000541661 PROM2Q8N271 834 aa18.78■□□□□ 0.6
SCARB1-207ENST00000541661 PPP1R1BQ9UD71 204 aaPredicted RBP18.78■□□□□ 0.6
SCARB1-207ENST00000541661 NFAT5O94916 1531 aa18.78■□□□□ 0.6
SCARB1-207ENST00000541661 NINLQ9Y2I6 1382 aa18.78■□□□□ 0.6
SCARB1-207ENST00000541661 ANO8Q9HCE9 1232 aaPredicted RBP18.77■□□□□ 0.6
SCARB1-207ENST00000541661 ABCC6O95255 1503 aa18.77■□□□□ 0.6
SCARB1-207ENST00000541661 ROCK2O75116 1388 aaKnown RBP18.77■□□□□ 0.6
SCARB1-207ENST00000541661 SIN3AQ96ST3 1273 aa18.76■□□□□ 0.59
SCARB1-207ENST00000541661 MON2Q7Z3U7 1717 aa18.75■□□□□ 0.59
SCARB1-207ENST00000541661 EXOC5O00471 708 aa18.75■□□□□ 0.59
SCARB1-207ENST00000541661 YY1P25490 414 aa18.75■□□□□ 0.59
SCARB1-207ENST00000541661 KTN1Q86UP2 1357 aaKnown RBP18.75■□□□□ 0.59
SCARB1-207ENST00000541661 CCDC7Q96M83 1385 aa18.75■□□□□ 0.59
SCARB1-207ENST00000541661 CSB-PGBD3P0DP91 1061 aa18.74■□□□□ 0.59
SCARB1-207ENST00000541661 USP54Q70EL1 1684 aa18.73■□□□□ 0.59
SCARB1-207ENST00000541661 SOX12O15370 315 aa18.73■□□□□ 0.59
SCARB1-207ENST00000541661 USP31Q70CQ4 1352 aa18.72■□□□□ 0.59
SCARB1-207ENST00000541661 SBNO2Q9Y2G9 1366 aa18.72■□□□□ 0.59
SCARB1-207ENST00000541661 DCAF8L1A6NGE4 600 aa18.71■□□□□ 0.59
SCARB1-207ENST00000541661 TXNRD1Q16881 649 aa18.71■□□□□ 0.59
SCARB1-207ENST00000541661 PDGFDQ9GZP0 370 aaPredicted RBP18.71■□□□□ 0.59
SCARB1-207ENST00000541661 TNS2Q63HR2 1409 aa18.7■□□□□ 0.58
SCARB1-207ENST00000541661 NEUROD1Q13562 356 aa18.69■□□□□ 0.58
SCARB1-207ENST00000541661 NHSQ6T4R5 1651 aa18.69■□□□□ 0.58
SCARB1-207ENST00000541661 PTGER2P43116 358 aa18.68■□□□□ 0.58
SCARB1-207ENST00000541661 SLC15A2Q16348 729 aa18.68■□□□□ 0.58
SCARB1-207ENST00000541661 STK32BQ9NY57 414 aa18.68■□□□□ 0.58
SCARB1-207ENST00000541661 CD163L1Q9NR16 1453 aa18.68■□□□□ 0.58
SCARB1-207ENST00000541661 LTN1O94822 1766 aa18.68■□□□□ 0.58
SCARB1-207ENST00000541661 ZBTB7AO95365 584 aa18.67■□□□□ 0.58
SCARB1-207ENST00000541661 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.67■□□□□ 0.58
SCARB1-207ENST00000541661 ERBB3P21860 1342 aa18.67■□□□□ 0.58
SCARB1-207ENST00000541661 MYOM1P52179 1685 aa18.66■□□□□ 0.58
SCARB1-207ENST00000541661 NME9Q86XW9 330 aa18.64■□□□□ 0.57
SCARB1-207ENST00000541661 ATF5Q9Y2D1 282 aaPredicted RBP18.64■□□□□ 0.57
SCARB1-207ENST00000541661 IL2RBP14784 551 aa18.63■□□□□ 0.57
SCARB1-207ENST00000541661 NLRP2Q9NX02 1062 aa18.63■□□□□ 0.57
SCARB1-207ENST00000541661 HDGFL2Q7Z4V5 671 aaPredicted RBP18.62■□□□□ 0.57
SCARB1-207ENST00000541661 ANKRD24Q8TF21 1146 aa18.62■□□□□ 0.57
SCARB1-207ENST00000541661 PUS7Q96PZ0 661 aaKnown RBP18.62■□□□□ 0.57
SCARB1-207ENST00000541661 SGIP1Q9BQI5 828 aa18.62■□□□□ 0.57
SCARB1-207ENST00000541661 CARD11Q9BXL7 1154 aa18.62■□□□□ 0.57
SCARB1-207ENST00000541661 MTFR1LQ9H019 292 aa18.62■□□□□ 0.57
SCARB1-207ENST00000541661 EDC4Q6P2E9 1401 aaKnown RBP18.62■□□□□ 0.57
SCARB1-207ENST00000541661 PAPPAQ13219 1627 aa18.62■□□□□ 0.57
SCARB1-207ENST00000541661 BTAF1O14981 1849 aa18.62■□□□□ 0.57
SCARB1-207ENST00000541661 ACSBG1Q96GR2 724 aa18.61■□□□□ 0.57
SCARB1-207ENST00000541661 SLC12A5Q9H2X9 1139 aa18.61■□□□□ 0.57
SCARB1-207ENST00000541661 TMC1Q8TDI8 760 aa18.6■□□□□ 0.57
SCARB1-207ENST00000541661 SYT17Q9BSW7 474 aa18.6■□□□□ 0.57
SCARB1-207ENST00000541661 UTRNP46939 3433 aa18.59■□□□□ 0.57
SCARB1-207ENST00000541661 TERF2IPQ9NYB0 399 aa18.59■□□□□ 0.57
SCARB1-207ENST00000541661 FHDC1Q9C0D6 1143 aaPredicted RBP18.58■□□□□ 0.56
SCARB1-207ENST00000541661 A0A1W2PP64 1363 aa18.57■□□□□ 0.56
SCARB1-207ENST00000541661 FAM208AQ9UK61 1670 aaKnown RBP18.57■□□□□ 0.56
SCARB1-207ENST00000541661 IP6K1Q92551 441 aa18.57■□□□□ 0.56
SCARB1-207ENST00000541661 KAT6BQ8WYB5 2073 aa18.56■□□□□ 0.56
SCARB1-207ENST00000541661 LRRC4BQ9NT99 713 aa18.55■□□□□ 0.56
SCARB1-207ENST00000541661 MAP3K5Q99683 1374 aa18.55■□□□□ 0.56
SCARB1-207ENST00000541661 QSER1Q2KHR3 1735 aa18.54■□□□□ 0.56
SCARB1-207ENST00000541661 ARXQ96QS3 562 aa18.54■□□□□ 0.56
SCARB1-207ENST00000541661 CHD4Q14839 1912 aa18.54■□□□□ 0.56
SCARB1-207ENST00000541661 ZNF827Q17R98 1081 aa18.53■□□□□ 0.56
SCARB1-207ENST00000541661 SLC27A3Q5K4L6 730 aa18.52■□□□□ 0.56
SCARB1-207ENST00000541661 AKT1S1Q96B36 256 aa18.52■□□□□ 0.56
SCARB1-207ENST00000541661 COL24A1Q17RW2 1714 aa18.52■□□□□ 0.55
SCARB1-207ENST00000541661 ZNF784Q8NCA9 323 aaPredicted RBP18.51■□□□□ 0.55
SCARB1-207ENST00000541661 SLC16A10Q8TF71 515 aa18.51■□□□□ 0.55
SCARB1-207ENST00000541661 DDX54Q8TDD1 881 aaKnown RBP18.5■□□□□ 0.55
SCARB1-207ENST00000541661 TESK2Q96S53 571 aa18.5■□□□□ 0.55
SCARB1-207ENST00000541661 SLC24A1O60721 1099 aa18.49■□□□□ 0.55
SCARB1-207ENST00000541661 TONSLQ96HA7 1378 aa18.49■□□□□ 0.55
SCARB1-207ENST00000541661 LTV1Q96GA3 475 aaPredicted RBP18.48■□□□□ 0.55
SCARB1-207ENST00000541661 COG3Q96JB2 828 aa18.48■□□□□ 0.55
SCARB1-207ENST00000541661 LY75O60449 1722 aa18.48■□□□□ 0.55
SCARB1-207ENST00000541661 SHANK3Q9BYB0 1731 aa18.48■□□□□ 0.55
SCARB1-207ENST00000541661 MAP3K19Q56UN5 1328 aa18.48■□□□□ 0.55
SCARB1-207ENST00000541661 RGPD2P0DJD1 1756 aa18.47■□□□□ 0.55
SCARB1-207ENST00000541661 ANKRD36BQ8N2N9 1353 aa18.47■□□□□ 0.55
SCARB1-207ENST00000541661 HOXC9P31274 260 aa18.47■□□□□ 0.55
SCARB1-207ENST00000541661 DOT1LQ8TEK3 1739 aa18.46■□□□□ 0.55
SCARB1-207ENST00000541661 ST20-MTHFSA0A0A6YYL1 179 aa18.46■□□□□ 0.55
SCARB1-207ENST00000541661 PRIM1P49642 420 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms