RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 FAM196AQ6ZSG2 479 aa11.43□□□□□ -0.58
LMO3-226ENST00000541589 NINLQ9Y2I6 1382 aa11.42□□□□□ -0.58
LMO3-226ENST00000541589 GSE1Q14687 1217 aa11.42□□□□□ -0.58
LMO3-226ENST00000541589 TMEM132EQ6IEE7 984 aa11.42□□□□□ -0.58
LMO3-226ENST00000541589 LMOD2Q6P5Q4 547 aa11.42□□□□□ -0.58
LMO3-226ENST00000541589 COL14A1Q05707 1796 aaKnown RBP11.42□□□□□ -0.58
LMO3-226ENST00000541589 RREB1Q92766 1687 aa11.42□□□□□ -0.58
LMO3-226ENST00000541589 ATMINO43313 823 aaPredicted RBP11.41□□□□□ -0.58
LMO3-226ENST00000541589 APBA3O96018 575 aa11.41□□□□□ -0.58
LMO3-226ENST00000541589 EIF4G2P78344 907 aaKnown RBP eCLIP11.41□□□□□ -0.58
LMO3-226ENST00000541589 PELP1Q8IZL8 1130 aaKnown RBP11.41□□□□□ -0.58
LMO3-226ENST00000541589 PCDHB13Q9Y5F0 798 aa11.41□□□□□ -0.58
LMO3-226ENST00000541589 YTHDC2Q9H6S0 1430 aaKnown RBP11.41□□□□□ -0.58
LMO3-226ENST00000541589 HSPA5P11021 654 aaKnown RBP11.4□□□□□ -0.58
LMO3-226ENST00000541589 PYGBP11216 843 aa11.4□□□□□ -0.58
LMO3-226ENST00000541589 SPON1Q9HCB6 807 aa11.4□□□□□ -0.58
LMO3-226ENST00000541589 RGPD8O14715 1765 aaPredicted RBP11.4□□□□□ -0.58
LMO3-226ENST00000541589 NUP188Q5SRE5 1749 aa11.4□□□□□ -0.58
LMO3-226ENST00000541589 SPATA31A1Q5TZJ5 1347 aa11.4□□□□□ -0.59
LMO3-226ENST00000541589 KCNQ2O43526 872 aa11.39□□□□□ -0.59
LMO3-226ENST00000541589 IFFO2Q5TF58 517 aa11.39□□□□□ -0.59
LMO3-226ENST00000541589 IFT172Q9UG01 1749 aa11.39□□□□□ -0.59
LMO3-226ENST00000541589 TRPM3Q9HCF6 1732 aaPredicted RBP11.39□□□□□ -0.59
LMO3-226ENST00000541589 PIK3C2GO75747 1445 aa11.38□□□□□ -0.59
LMO3-226ENST00000541589 NBPF14Q5TI25 921 aa11.38□□□□□ -0.59
LMO3-226ENST00000541589 IFNL1Q8IU54 200 aa11.38□□□□□ -0.59
LMO3-226ENST00000541589 ZNF784Q8NCA9 323 aaPredicted RBP11.38□□□□□ -0.59
LMO3-226ENST00000541589 SPATA31E1Q6ZUB1 1445 aa11.38□□□□□ -0.59
LMO3-226ENST00000541589 ALS2Q96Q42 1657 aa11.38□□□□□ -0.59
LMO3-226ENST00000541589 PMFBP1Q8TBY8 1022 aa11.38□□□□□ -0.59
LMO3-226ENST00000541589 HIRIP3Q9BW71 556 aaPredicted RBP11.38□□□□□ -0.59
LMO3-226ENST00000541589 PPP1R1BQ9UD71 204 aaPredicted RBP11.38□□□□□ -0.59
LMO3-226ENST00000541589 ANKARQ7Z5J8 1434 aa11.37□□□□□ -0.59
LMO3-226ENST00000541589 UTRNP46939 3433 aa11.37□□□□□ -0.59
LMO3-226ENST00000541589 DCAF11Q8TEB1 546 aa11.37□□□□□ -0.59
LMO3-226ENST00000541589 BMP2KQ9NSY1 1161 aaPredicted RBP11.37□□□□□ -0.59
LMO3-226ENST00000541589 TIE1P35590 1138 aa11.36□□□□□ -0.59
LMO3-226ENST00000541589 CAMTA1Q9Y6Y1 1673 aa11.36□□□□□ -0.59
LMO3-226ENST00000541589 CRYBG1Q9Y4K1 1723 aa11.35□□□□□ -0.59
LMO3-226ENST00000541589 CHRM1P11229 460 aaPredicted RBP11.35□□□□□ -0.59
LMO3-226ENST00000541589 ATN1P54259 1190 aaPredicted RBP11.35□□□□□ -0.59
LMO3-226ENST00000541589 DDX10Q13206 875 aaKnown RBP11.35□□□□□ -0.59
LMO3-226ENST00000541589 BARGINQ6ZT62 677 aa11.34□□□□□ -0.59
LMO3-226ENST00000541589 C14orf93Q9H972 538 aaKnown RBP11.34□□□□□ -0.59
LMO3-226ENST00000541589 PRDM11Q9NQV5 511 aa11.34□□□□□ -0.59
LMO3-226ENST00000541589 SENP3-EIF4A1A0A087X0R7 540 aa11.33□□□□□ -0.6
LMO3-226ENST00000541589 C1QTNF8P60827 252 aa11.33□□□□□ -0.6
LMO3-226ENST00000541589 RGL3Q3MIN7 710 aa11.33□□□□□ -0.6
LMO3-226ENST00000541589 STAC3Q96MF2 364 aa11.33□□□□□ -0.6
LMO3-226ENST00000541589 KDM2AQ9Y2K7 1162 aa11.33□□□□□ -0.6
LMO3-226ENST00000541589 TRPM1Q7Z4N2 1603 aa11.33□□□□□ -0.6
LMO3-226ENST00000541589 GPRASP1Q5JY77 1395 aa11.33□□□□□ -0.6
LMO3-226ENST00000541589 KIAA0232Q92628 1395 aa11.33□□□□□ -0.6
LMO3-226ENST00000541589 USP47Q96K76 1375 aa11.33□□□□□ -0.6
LMO3-226ENST00000541589 PRAM1Q96QH2 718 aa11.32□□□□□ -0.6
LMO3-226ENST00000541589 CIZ1Q9ULV3 898 aaPredicted RBP11.32□□□□□ -0.6
LMO3-226ENST00000541589 PDE3BQ13370 1112 aa11.32□□□□□ -0.6
LMO3-226ENST00000541589 WASHC2AQ641Q2 1341 aa11.31□□□□□ -0.6
LMO3-226ENST00000541589 PRR36Q9H6K5 1346 aa11.31□□□□□ -0.6
LMO3-226ENST00000541589 TTLL13PA6NNM8 815 aa11.31□□□□□ -0.6
LMO3-226ENST00000541589 SAFB2Q14151 953 aaKnown RBP eCLIP11.31□□□□□ -0.6
LMO3-226ENST00000541589 CHRNA2Q15822 529 aa11.31□□□□□ -0.6
LMO3-226ENST00000541589 CARD11Q9BXL7 1154 aa11.31□□□□□ -0.6
LMO3-226ENST00000541589 STRN4Q9NRL3 753 aa11.31□□□□□ -0.6
LMO3-226ENST00000541589 DLC1Q96QB1 1528 aa11.3□□□□□ -0.6
LMO3-226ENST00000541589 ROCK2O75116 1388 aaKnown RBP11.3□□□□□ -0.6
LMO3-226ENST00000541589 CCDC7Q96M83 1385 aa11.3□□□□□ -0.6
LMO3-226ENST00000541589 NRKQ7Z2Y5 1582 aa11.3□□□□□ -0.6
LMO3-226ENST00000541589 CASZ1Q86V15 1759 aa11.3□□□□□ -0.6
LMO3-226ENST00000541589 POTEJP0CG39 1038 aa11.3□□□□□ -0.6
LMO3-226ENST00000541589 PTGER2P43116 358 aa11.3□□□□□ -0.6
LMO3-226ENST00000541589 FAM163AQ96GL9 167 aaPredicted RBP11.3□□□□□ -0.6
LMO3-226ENST00000541589 ANO8Q9HCE9 1232 aaPredicted RBP11.3□□□□□ -0.6
LMO3-226ENST00000541589 PCDHB8Q9UN66 801 aa11.3□□□□□ -0.6
LMO3-226ENST00000541589 SSH2Q76I76 1423 aa11.29□□□□□ -0.6
LMO3-226ENST00000541589 PLSCR1O15162 318 aa11.29□□□□□ -0.6
LMO3-226ENST00000541589 CFAP70Q5T0N1 1121 aa11.29□□□□□ -0.6
LMO3-226ENST00000541589 PDGFDQ9GZP0 370 aaPredicted RBP11.29□□□□□ -0.6
LMO3-226ENST00000541589 USP35Q9P2H5 1018 aa11.28□□□□□ -0.6
LMO3-226ENST00000541589 TULP4Q9NRJ4 1543 aa11.27□□□□□ -0.6
LMO3-226ENST00000541589 TCP11L2Q8N4U5 519 aa11.27□□□□□ -0.6
LMO3-226ENST00000541589 SLC39A7Q92504 469 aa11.27□□□□□ -0.6
LMO3-226ENST00000541589 RGPD3A6NKT7 1758 aaPredicted RBP11.27□□□□□ -0.61
LMO3-226ENST00000541589 RGPD4Q7Z3J3 1758 aa11.27□□□□□ -0.61
LMO3-226ENST00000541589 MYOM1P52179 1685 aa11.26□□□□□ -0.61
LMO3-226ENST00000541589 C11orf95C9JLR9 678 aaPredicted RBP11.26□□□□□ -0.61
LMO3-226ENST00000541589 C7P10643 843 aa11.26□□□□□ -0.61
LMO3-226ENST00000541589 ZC3H6P61129 1189 aaKnown RBP11.26□□□□□ -0.61
LMO3-226ENST00000541589 LARP1Q6PKG0 1096 aaKnown RBP11.26□□□□□ -0.61
LMO3-226ENST00000541589 SYT17Q9BSW7 474 aa11.26□□□□□ -0.61
LMO3-226ENST00000541589 POGKQ9P215 609 aa11.26□□□□□ -0.61
LMO3-226ENST00000541589 METRNQ9UJH8 293 aa11.26□□□□□ -0.61
LMO3-226ENST00000541589 THRAP3Q9Y2W1 955 aaKnown RBP11.26□□□□□ -0.61
LMO3-226ENST00000541589 EIF3AQ14152 1382 aaKnown RBP11.26□□□□□ -0.61
LMO3-226ENST00000541589 PHRF1Q9P1Y6 1649 aaKnown RBP11.26□□□□□ -0.61
LMO3-226ENST00000541589 ANP32CO43423 234 aa11.25□□□□□ -0.61
LMO3-226ENST00000541589 NGDNQ8NEJ9 315 aaKnown RBP11.25□□□□□ -0.61
LMO3-226ENST00000541589 KIF7Q2M1P5 1343 aa11.25□□□□□ -0.61
LMO3-226ENST00000541589 PEAK1Q9H792 1746 aa11.25□□□□□ -0.61
LMO3-226ENST00000541589 WASLO00401 505 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms