RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 TMEM132AQ24JP5 1023 aa8.34□□□□□ -1.07
SNHG1-217ENST00000541578 C11orf95C9JLR9 678 aaPredicted RBP8.33□□□□□ -1.08
SNHG1-217ENST00000541578 FBXO45P0C2W1 286 aa8.33□□□□□ -1.08
SNHG1-217ENST00000541578 CCDC116Q8IYX3 515 aa8.33□□□□□ -1.08
SNHG1-217ENST00000541578 ITPKCQ96DU7 683 aa8.33□□□□□ -1.08
SNHG1-217ENST00000541578 SENP2Q9HC62 589 aa8.33□□□□□ -1.08
SNHG1-217ENST00000541578 EMILIN1Q9Y6C2 1016 aa8.33□□□□□ -1.08
SNHG1-217ENST00000541578 NR1H3Q13133 447 aa8.32□□□□□ -1.08
SNHG1-217ENST00000541578 NBPF20Q3BBV1 942 aa8.32□□□□□ -1.08
SNHG1-217ENST00000541578 ZFAND3Q9H8U3 227 aa8.32□□□□□ -1.08
SNHG1-217ENST00000541578 PCDHB9Q9Y5E1 797 aa8.32□□□□□ -1.08
SNHG1-217ENST00000541578 DHX9Q08211 1270 aaKnown RBP8.31□□□□□ -1.08
SNHG1-217ENST00000541578 GPR37L1O60883 481 aa8.3□□□□□ -1.08
SNHG1-217ENST00000541578 BMP1P13497 986 aa8.3□□□□□ -1.08
SNHG1-217ENST00000541578 SCARF1Q14162 830 aa8.3□□□□□ -1.08
SNHG1-217ENST00000541578 PPP1R26Q5T8A7 1209 aaPredicted RBP8.3□□□□□ -1.08
SNHG1-217ENST00000541578 ERICH6Q7L0X2 663 aa8.3□□□□□ -1.08
SNHG1-217ENST00000541578 TRIM46Q7Z4K8 759 aa8.3□□□□□ -1.08
SNHG1-217ENST00000541578 KIFC2Q96AC6 838 aa8.3□□□□□ -1.08
SNHG1-217ENST00000541578 PGPEP1Q9NXJ5 209 aa8.3□□□□□ -1.08
SNHG1-217ENST00000541578 TBC1D2BQ9UPU7 963 aa8.3□□□□□ -1.08
SNHG1-217ENST00000541578 ZNF330Q9Y3S2 320 aaPredicted RBP8.3□□□□□ -1.08
SNHG1-217ENST00000541578 MCCD1P59942 119 aaPredicted RBP8.29□□□□□ -1.08
SNHG1-217ENST00000541578 INTS6LQ5JSJ4 861 aaKnown RBP8.29□□□□□ -1.08
SNHG1-217ENST00000541578 ZNF592Q92610 1267 aa8.29□□□□□ -1.08
SNHG1-217ENST00000541578 TRIM47Q96LD4 638 aa8.29□□□□□ -1.08
SNHG1-217ENST00000541578 RAB15P59190 212 aa8.28□□□□□ -1.08
SNHG1-217ENST00000541578 MCM6Q14566 821 aa8.28□□□□□ -1.08
SNHG1-217ENST00000541578 MRPL14Q6P1L8 145 aaKnown RBP8.28□□□□□ -1.08
SNHG1-217ENST00000541578 ESPNB1AK53 854 aa8.27□□□□□ -1.09
SNHG1-217ENST00000541578 SNRPBP14678 240 aaKnown RBP8.27□□□□□ -1.09
SNHG1-217ENST00000541578 GDPD2Q9HCC8 539 aa8.27□□□□□ -1.09
SNHG1-217ENST00000541578 UPP2O95045 317 aa8.26□□□□□ -1.09
SNHG1-217ENST00000541578 SEPT12Q8IYM1 358 aa8.26□□□□□ -1.09
SNHG1-217ENST00000541578 ZFP42Q96MM3 310 aa8.26□□□□□ -1.09
SNHG1-217ENST00000541578 GTF3C3Q9Y5Q9 886 aa8.26□□□□□ -1.09
SNHG1-217ENST00000541578 ERVH48-1M5A8F1 160 aa8.25□□□□□ -1.09
SNHG1-217ENST00000541578 GIGYF1O75420 1035 aaPredicted RBP8.25□□□□□ -1.09
SNHG1-217ENST00000541578 ABL2P42684 1182 aa8.25□□□□□ -1.09
SNHG1-217ENST00000541578 MEIOBQ8N635 442 aa8.25□□□□□ -1.09
SNHG1-217ENST00000541578 PURBQ96QR8 312 aaKnown RBP8.25□□□□□ -1.09
SNHG1-217ENST00000541578 FLIIQ13045 1269 aa8.24□□□□□ -1.09
SNHG1-217ENST00000541578 IRF5Q13568 498 aa8.24□□□□□ -1.09
SNHG1-217ENST00000541578 CCDC125Q86Z20 511 aa8.24□□□□□ -1.09
SNHG1-217ENST00000541578 TRIM52Q96A61 297 aa8.24□□□□□ -1.09
SNHG1-217ENST00000541578 ZNF775Q96BV0 537 aaPredicted RBP8.24□□□□□ -1.09
SNHG1-217ENST00000541578 TSEN34Q9BSV6 310 aaKnown RBP8.24□□□□□ -1.09
SNHG1-217ENST00000541578 BMP2P12643 396 aa8.23□□□□□ -1.09
SNHG1-217ENST00000541578 CBLBQ13191 982 aa8.23□□□□□ -1.09
SNHG1-217ENST00000541578 C6orf118Q5T5N4 469 aa8.23□□□□□ -1.09
SNHG1-217ENST00000541578 RNF20Q5VTR2 975 aa8.23□□□□□ -1.09
SNHG1-217ENST00000541578 Q6ZVU0 165 aa8.23□□□□□ -1.09
SNHG1-217ENST00000541578 TMPRSS4Q9NRS4 437 aa8.23□□□□□ -1.09
SNHG1-217ENST00000541578 EIF4G2P78344 907 aaKnown RBP eCLIP8.22□□□□□ -1.09
SNHG1-217ENST00000541578 WASHC4Q2M389 1173 aa8.22□□□□□ -1.09
SNHG1-217ENST00000541578 LINC00528Q8N1L1 170 aa8.22□□□□□ -1.09
SNHG1-217ENST00000541578 ZNF784Q8NCA9 323 aaPredicted RBP8.21□□□□□ -1.1
SNHG1-217ENST00000541578 COG6Q9Y2V7 657 aa8.21□□□□□ -1.1
SNHG1-217ENST00000541578 RAD21O60216 631 aa8.2□□□□□ -1.1
SNHG1-217ENST00000541578 CEP126Q9P2H0 1117 aa8.2□□□□□ -1.1
SNHG1-217ENST00000541578 LILRA1O75019 489 aa8.19□□□□□ -1.1
SNHG1-217ENST00000541578 VAC14Q08AM6 782 aa8.19□□□□□ -1.1
SNHG1-217ENST00000541578 TIMELESSQ9UNS1 1208 aa8.19□□□□□ -1.1
SNHG1-217ENST00000541578 UBTFP17480 764 aaKnown RBP8.18□□□□□ -1.1
SNHG1-217ENST00000541578 ADD1P35611 737 aaKnown RBP8.18□□□□□ -1.1
SNHG1-217ENST00000541578 WWC1Q8IX03 1113 aa8.18□□□□□ -1.1
SNHG1-217ENST00000541578 AGBL1Q96MI9 1066 aa8.18□□□□□ -1.1
SNHG1-217ENST00000541578 CYLDQ9NQC7 956 aa8.18□□□□□ -1.1
SNHG1-217ENST00000541578 MAN1A2O60476 641 aa8.17□□□□□ -1.1
SNHG1-217ENST00000541578 RELBQ01201 579 aa8.17□□□□□ -1.1
SNHG1-217ENST00000541578 PCDHB11Q9Y5F2 797 aa8.17□□□□□ -1.1
SNHG1-217ENST00000541578 SPINT1O43278 529 aa8.16□□□□□ -1.1
SNHG1-217ENST00000541578 ADH1AP07327 375 aa8.16□□□□□ -1.1
SNHG1-217ENST00000541578 SOS2Q07890 1332 aaPredicted RBP8.16□□□□□ -1.1
SNHG1-217ENST00000541578 POM121Q96HA1 1249 aa8.16□□□□□ -1.1
SNHG1-217ENST00000541578 ESF1Q9H501 851 aaKnown RBP8.16□□□□□ -1.1
SNHG1-217ENST00000541578 TTLL8A6PVC2 850 aa8.15□□□□□ -1.1
SNHG1-217ENST00000541578 PTGIRP43119 386 aa8.15□□□□□ -1.1
SNHG1-217ENST00000541578 SEMA3FQ13275 785 aa8.15□□□□□ -1.1
SNHG1-217ENST00000541578 ZNF395Q9H8N7 513 aaPredicted RBP8.15□□□□□ -1.1
SNHG1-217ENST00000541578 SOBPA7XYQ1 873 aa8.14□□□□□ -1.11
SNHG1-217ENST00000541578 SOX11P35716 441 aa8.14□□□□□ -1.11
SNHG1-217ENST00000541578 ERVK-9P63128 1117 aa8.14□□□□□ -1.11
SNHG1-217ENST00000541578 SLFNL1Q499Z3 407 aa8.14□□□□□ -1.11
SNHG1-217ENST00000541578 CC2D2BQ6DHV5 1058 aa8.14□□□□□ -1.11
SNHG1-217ENST00000541578 TREML4Q6UXN2 200 aa8.14□□□□□ -1.11
SNHG1-217ENST00000541578 TERTO14746 1132 aaKnown RBP8.13□□□□□ -1.11
SNHG1-217ENST00000541578 RNF135Q8IUD6 432 aa8.13□□□□□ -1.11
SNHG1-217ENST00000541578 KDF1Q8NAX2 398 aaPredicted RBP8.13□□□□□ -1.11
SNHG1-217ENST00000541578 INSM2Q96T92 566 aaPredicted RBP8.13□□□□□ -1.11
SNHG1-217ENST00000541578 NXF1Q9UBU9 619 aaKnown RBP8.13□□□□□ -1.11
SNHG1-217ENST00000541578 FIGNL2A6NMB9 653 aa8.12□□□□□ -1.11
SNHG1-217ENST00000541578 ATP5J2-PTCD1G3V325 749 aa8.12□□□□□ -1.11
SNHG1-217ENST00000541578 C14orf37Q86TY3 774 aa8.12□□□□□ -1.11
SNHG1-217ENST00000541578 PHTF2Q8N3S3 785 aa8.12□□□□□ -1.11
SNHG1-217ENST00000541578 CCDC85AQ96PX6 553 aaPredicted RBP8.12□□□□□ -1.11
SNHG1-217ENST00000541578 DNMT3LQ9UJW3 386 aa8.12□□□□□ -1.11
SNHG1-217ENST00000541578 WFS1O76024 890 aa8.11□□□□□ -1.11
SNHG1-217ENST00000541578 CTSOP43234 321 aaPredicted RBP8.11□□□□□ -1.11
SNHG1-217ENST00000541578 SCTRP47872 440 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms