RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 DCAF5Q96JK2 942 aa9.94□□□□□ -0.82
RAP1B-224ENST00000541216 PSMG3-AS1Q96PY0 264 aa9.94□□□□□ -0.82
RAP1B-224ENST00000541216 LYPD4Q6UWN0 246 aa9.93□□□□□ -0.82
RAP1B-224ENST00000541216 SPIRE2Q8WWL2 714 aa9.93□□□□□ -0.82
RAP1B-224ENST00000541216 NDUFV2P19404 249 aa9.92□□□□□ -0.82
RAP1B-224ENST00000541216 FSHRP23945 695 aa9.92□□□□□ -0.82
RAP1B-224ENST00000541216 SRSF11Q05519 484 aaKnown RBP9.92□□□□□ -0.82
RAP1B-224ENST00000541216 GPBP1L1Q9HC44 474 aaPredicted RBP9.92□□□□□ -0.82
RAP1B-224ENST00000541216 MAP4K5Q9Y4K4 846 aa9.92□□□□□ -0.82
RAP1B-224ENST00000541216 C4orf48Q5BLP8 95 aa9.91□□□□□ -0.82
RAP1B-224ENST00000541216 MOXD2PA6NHM9 499 aa9.9□□□□□ -0.82
RAP1B-224ENST00000541216 K7ELQ4 463 aaPredicted RBP9.9□□□□□ -0.82
RAP1B-224ENST00000541216 SPINT1O43278 529 aa9.9□□□□□ -0.82
RAP1B-224ENST00000541216 CELA2BP08218 269 aaPredicted RBP9.9□□□□□ -0.82
RAP1B-224ENST00000541216 GIGYF2Q6Y7W6 1299 aaKnown RBP9.9□□□□□ -0.82
RAP1B-224ENST00000541216 PODNQ7Z5L7 613 aa9.9□□□□□ -0.82
RAP1B-224ENST00000541216 CCDC116Q8IYX3 515 aa9.9□□□□□ -0.82
RAP1B-224ENST00000541216 BEND7Q8N7W2 519 aaPredicted RBP9.9□□□□□ -0.82
RAP1B-224ENST00000541216 TTLL12Q14166 644 aaPredicted RBP9.89□□□□□ -0.83
RAP1B-224ENST00000541216 VASH1Q7L8A9 365 aaPredicted RBP9.89□□□□□ -0.83
RAP1B-224ENST00000541216 KDM4CQ9H3R0 1056 aa9.89□□□□□ -0.83
RAP1B-224ENST00000541216 F12P00748 615 aaPredicted RBP9.88□□□□□ -0.83
RAP1B-224ENST00000541216 PROCP04070 461 aa9.88□□□□□ -0.83
RAP1B-224ENST00000541216 NEUROD2Q15784 382 aa9.88□□□□□ -0.83
RAP1B-224ENST00000541216 Q8N3U1 123 aa9.88□□□□□ -0.83
RAP1B-224ENST00000541216 MAP10Q9P2G4 905 aa9.88□□□□□ -0.83
RAP1B-224ENST00000541216 ARMC2Q8NEN0 867 aa9.87□□□□□ -0.83
RAP1B-224ENST00000541216 C1QTNF2Q9BXJ5 285 aa9.87□□□□□ -0.83
RAP1B-224ENST00000541216 PGPEP1Q9NXJ5 209 aa9.87□□□□□ -0.83
RAP1B-224ENST00000541216 CNTNAP5Q8WYK1 1306 aa9.85□□□□□ -0.83
RAP1B-224ENST00000541216 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.85□□□□□ -0.83
RAP1B-224ENST00000541216 ITGB2P05107 769 aa9.85□□□□□ -0.83
RAP1B-224ENST00000541216 SSTR3P32745 418 aaPredicted RBP9.85□□□□□ -0.83
RAP1B-224ENST00000541216 Q6ZVU0 165 aa9.85□□□□□ -0.83
RAP1B-224ENST00000541216 SH3RF1Q7Z6J0 888 aa9.85□□□□□ -0.83
RAP1B-224ENST00000541216 TRMT44Q8IYL2 757 aaKnown RBP9.85□□□□□ -0.83
RAP1B-224ENST00000541216 KRTAP9-2Q9BYQ4 174 aa9.85□□□□□ -0.83
RAP1B-224ENST00000541216 GJA5P36382 358 aa9.84□□□□□ -0.83
RAP1B-224ENST00000541216 CBLBQ13191 982 aa9.81□□□□□ -0.84
RAP1B-224ENST00000541216 NEDD1Q8NHV4 660 aa9.81□□□□□ -0.84
RAP1B-224ENST00000541216 FAM117AQ9C073 453 aa9.81□□□□□ -0.84
RAP1B-224ENST00000541216 KRTAP9-6A0A140TA67 174 aa9.8□□□□□ -0.84
RAP1B-224ENST00000541216 PPP1R26Q5T8A7 1209 aaPredicted RBP9.8□□□□□ -0.84
RAP1B-224ENST00000541216 NBPF14Q5TI25 921 aa9.8□□□□□ -0.84
RAP1B-224ENST00000541216 CFAP99D6REC4 459 aa9.79□□□□□ -0.84
RAP1B-224ENST00000541216 CTSOP43234 321 aaPredicted RBP9.78□□□□□ -0.84
RAP1B-224ENST00000541216 BAG6P46379 1132 aa9.78□□□□□ -0.84
RAP1B-224ENST00000541216 GAS6Q14393 721 aa9.78□□□□□ -0.84
RAP1B-224ENST00000541216 DIXDC1Q155Q3 683 aa9.78□□□□□ -0.84
RAP1B-224ENST00000541216 BCRP11274 1271 aa9.77□□□□□ -0.85
RAP1B-224ENST00000541216 BEGAINQ9BUH8 593 aa9.77□□□□□ -0.85
RAP1B-224ENST00000541216 ZBTB3Q9H5J0 574 aa9.77□□□□□ -0.85
RAP1B-224ENST00000541216 POLMQ9NP87 494 aaPredicted RBP9.77□□□□□ -0.85
RAP1B-224ENST00000541216 MBIPQ9NS73 344 aa9.77□□□□□ -0.85
RAP1B-224ENST00000541216 SENP3-EIF4A1A0A087X0R7 540 aa9.76□□□□□ -0.85
RAP1B-224ENST00000541216 MAGEB6P1A0A0J9YX57 407 aa9.76□□□□□ -0.85
RAP1B-224ENST00000541216 DHX9Q08211 1270 aaKnown RBP9.75□□□□□ -0.85
RAP1B-224ENST00000541216 RSBN1LQ6PCB5 846 aaPredicted RBP9.75□□□□□ -0.85
RAP1B-224ENST00000541216 SH3BP5LQ7L8J4 393 aa9.75□□□□□ -0.85
RAP1B-224ENST00000541216 DDRGK1Q96HY6 314 aa9.75□□□□□ -0.85
RAP1B-224ENST00000541216 INSM2Q96T92 566 aaPredicted RBP9.75□□□□□ -0.85
RAP1B-224ENST00000541216 HRCP23327 699 aa9.74□□□□□ -0.85
RAP1B-224ENST00000541216 FOXR1Q6PIV2 292 aa9.74□□□□□ -0.85
RAP1B-224ENST00000541216 IL27Q8NEV9 243 aa9.74□□□□□ -0.85
RAP1B-224ENST00000541216 RNF217Q8TC41 542 aa9.74□□□□□ -0.85
RAP1B-224ENST00000541216 GMCL1Q96IK5 515 aa9.74□□□□□ -0.85
RAP1B-224ENST00000541216 RELBQ01201 579 aa9.73□□□□□ -0.85
RAP1B-224ENST00000541216 PRPF38BQ5VTL8 546 aaKnown RBP9.73□□□□□ -0.85
RAP1B-224ENST00000541216 LRRC4BQ9NT99 713 aa9.73□□□□□ -0.85
RAP1B-224ENST00000541216 ALYREFQ86V81 257 aaKnown RBP9.72□□□□□ -0.85
RAP1B-224ENST00000541216 AGBL1Q96MI9 1066 aa9.72□□□□□ -0.85
RAP1B-224ENST00000541216 CDV3Q9UKY7 258 aaKnown RBP9.72□□□□□ -0.85
RAP1B-224ENST00000541216 PCDHB15Q9Y5E8 787 aa9.72□□□□□ -0.85
RAP1B-224ENST00000541216 IGF1RP08069 1367 aa9.72□□□□□ -0.85
RAP1B-224ENST00000541216 PER1O15534 1290 aaPredicted RBP9.71□□□□□ -0.86
RAP1B-224ENST00000541216 KRTAP1-3Q8IUG1 177 aa9.71□□□□□ -0.86
RAP1B-224ENST00000541216 GPKOWQ92917 476 aaPredicted RBP eCLIP9.71□□□□□ -0.861e-6■■■■■ 28.4
RAP1B-224ENST00000541216 FURINP09958 794 aa9.7□□□□□ -0.86
RAP1B-224ENST00000541216 CARD14Q9BXL6 1004 aa9.7□□□□□ -0.86
RAP1B-224ENST00000541216 TBC1D2Q9BYX2 928 aa9.7□□□□□ -0.86
RAP1B-224ENST00000541216 ERFEQ4G0M1 354 aa9.69□□□□□ -0.86
RAP1B-224ENST00000541216 TSC1Q92574 1164 aa9.68□□□□□ -0.86
RAP1B-224ENST00000541216 KCTD15Q96SI1 283 aaPredicted RBP9.68□□□□□ -0.86
RAP1B-224ENST00000541216 CUEDC1Q9NWM3 386 aaPredicted RBP9.68□□□□□ -0.86
RAP1B-224ENST00000541216 MYSM1Q5VVJ2 828 aa9.67□□□□□ -0.86
RAP1B-224ENST00000541216 LYSMD3Q7Z3D4 306 aa9.67□□□□□ -0.86
RAP1B-224ENST00000541216 ZNF395Q9H8N7 513 aaPredicted RBP9.67□□□□□ -0.86
RAP1B-224ENST00000541216 KRBA1A5PL33 1030 aa9.66□□□□□ -0.86
RAP1B-224ENST00000541216 SH3D19Q5HYK7 790 aa9.66□□□□□ -0.86
RAP1B-224ENST00000541216 TRIM22Q8IYM9 498 aa9.66□□□□□ -0.86
RAP1B-224ENST00000541216 ACDQ96AP0 544 aa9.66□□□□□ -0.86
RAP1B-224ENST00000541216 ZNF837Q96EG3 531 aaPredicted RBP9.66□□□□□ -0.86
RAP1B-224ENST00000541216 GOPCQ9HD26 462 aa9.66□□□□□ -0.86
RAP1B-224ENST00000541216 NSFL1CQ9UNZ2 370 aaKnown RBP9.66□□□□□ -0.86
RAP1B-224ENST00000541216 TMEM132AQ24JP5 1023 aa9.65□□□□□ -0.86
RAP1B-224ENST00000541216 SLC10A4Q96EP9 437 aa9.65□□□□□ -0.86
RAP1B-224ENST00000541216 RSPH6AQ9H0K4 717 aa9.64□□□□□ -0.87
RAP1B-224ENST00000541216 FOXD4L5Q5VV16 416 aaPredicted RBP9.63□□□□□ -0.87
RAP1B-224ENST00000541216 RIC3Q7Z5B4 369 aa9.63□□□□□ -0.87
RAP1B-224ENST00000541216 CABLES1Q8TDN4 633 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms