RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 BCL2L12Q9HB09 334 aa11.99□□□□□ -0.49
CLDN2-202ENST00000540876 RALGAPBQ86X10 1494 aa11.99□□□□□ -0.49
CLDN2-202ENST00000540876 SAFB2Q14151 953 aaKnown RBP eCLIP11.99□□□□□ -0.49
CLDN2-202ENST00000540876 KLHL40Q2TBA0 621 aa11.99□□□□□ -0.49
CLDN2-202ENST00000540876 TIGD1Q96MW7 591 aa11.98□□□□□ -0.49
CLDN2-202ENST00000540876 RNF216Q9NWF9 866 aaPredicted RBP11.98□□□□□ -0.49
CLDN2-202ENST00000540876 TRAK1Q9UPV9 953 aa11.98□□□□□ -0.49
CLDN2-202ENST00000540876 CCDC66A2RUB6 948 aa11.98□□□□□ -0.49
CLDN2-202ENST00000540876 DDIT3P35638 169 aa11.98□□□□□ -0.49
CLDN2-202ENST00000540876 SLC20A2Q08357 652 aa11.98□□□□□ -0.49
CLDN2-202ENST00000540876 RPGRIP1LQ68CZ1 1315 aa11.98□□□□□ -0.49
CLDN2-202ENST00000540876 MPNDQ8N594 471 aa11.97□□□□□ -0.49
CLDN2-202ENST00000540876 CLUAP1Q96AJ1 413 aa11.97□□□□□ -0.49
CLDN2-202ENST00000540876 CIZ1Q9ULV3 898 aaPredicted RBP11.97□□□□□ -0.49
CLDN2-202ENST00000540876 EID1Q9Y6B2 187 aa11.97□□□□□ -0.49
CLDN2-202ENST00000540876 NEXMIFQ5QGS0 1516 aa11.97□□□□□ -0.49
CLDN2-202ENST00000540876 SSFA2P28290 1259 aa11.97□□□□□ -0.49
CLDN2-202ENST00000540876 PRIM1P49642 420 aaKnown RBP11.97□□□□□ -0.49
CLDN2-202ENST00000540876 ZSCAN23Q3MJ62 389 aa11.97□□□□□ -0.49
CLDN2-202ENST00000540876 TRERF1Q96PN7 1200 aa11.97□□□□□ -0.49
CLDN2-202ENST00000540876 COG6Q9Y2V7 657 aa11.97□□□□□ -0.49
CLDN2-202ENST00000540876 UHRF1BP1Q6BDS2 1440 aa11.97□□□□□ -0.49
CLDN2-202ENST00000540876 RBM25P49756 843 aaKnown RBP11.97□□□□□ -0.49
CLDN2-202ENST00000540876 ZNF445P59923 1031 aa11.97□□□□□ -0.49
CLDN2-202ENST00000540876 GOLGA2Q08379 1002 aa11.97□□□□□ -0.49
CLDN2-202ENST00000540876 RBM33Q96EV2 1170 aaKnown RBP11.97□□□□□ -0.49
CLDN2-202ENST00000540876 PDZRN3Q9UPQ7 1066 aa11.97□□□□□ -0.49
CLDN2-202ENST00000540876 IBTKQ9P2D0 1353 aaPredicted RBP11.96□□□□□ -0.49
CLDN2-202ENST00000540876 MYO3AQ8NEV4 1616 aa11.96□□□□□ -0.5
CLDN2-202ENST00000540876 NGEFQ8N5V2 710 aa11.96□□□□□ -0.5
CLDN2-202ENST00000540876 C14orf93Q9H972 538 aaKnown RBP11.96□□□□□ -0.5
CLDN2-202ENST00000540876 ZFYVE9O95405 1425 aa11.95□□□□□ -0.5
CLDN2-202ENST00000540876 GTF2F1P35269 517 aaKnown RBP eCLIP11.95□□□□□ -0.5
CLDN2-202ENST00000540876 SMC5Q8IY18 1101 aa11.95□□□□□ -0.5
CLDN2-202ENST00000540876 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.95□□□□□ -0.5
CLDN2-202ENST00000540876 APPP05067 770 aa11.95□□□□□ -0.5
CLDN2-202ENST00000540876 PANK1Q8TE04 598 aa11.95□□□□□ -0.5
CLDN2-202ENST00000540876 HDAC5Q9UQL6 1122 aa11.95□□□□□ -0.5
CLDN2-202ENST00000540876 CEP170BQ9Y4F5 1589 aaPredicted RBP11.94□□□□□ -0.5
CLDN2-202ENST00000540876 CAPN2P17655 700 aa11.94□□□□□ -0.5
CLDN2-202ENST00000540876 ANKLE2Q86XL3 938 aa11.94□□□□□ -0.5
CLDN2-202ENST00000540876 UBR1Q8IWV7 1749 aa11.94□□□□□ -0.5
CLDN2-202ENST00000540876 ERICH4A6NGS2 130 aa11.94□□□□□ -0.5
CLDN2-202ENST00000540876 RNF214Q8ND24 703 aa11.94□□□□□ -0.5
CLDN2-202ENST00000540876 PIK3C2GO75747 1445 aa11.94□□□□□ -0.5
CLDN2-202ENST00000540876 BLMP54132 1417 aaPredicted RBP11.94□□□□□ -0.5
CLDN2-202ENST00000540876 CGNL1Q0VF96 1302 aa11.94□□□□□ -0.5
CLDN2-202ENST00000540876 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.93□□□□□ -0.5
CLDN2-202ENST00000540876 ADAMTS8Q9UP79 889 aa11.93□□□□□ -0.5
CLDN2-202ENST00000540876 METP08581 1390 aa11.93□□□□□ -0.5
CLDN2-202ENST00000540876 BAG4O95429 457 aaKnown RBP11.93□□□□□ -0.5
CLDN2-202ENST00000540876 GABPB1Q06547 395 aaPredicted RBP11.93□□□□□ -0.5
CLDN2-202ENST00000540876 MCTP1Q6DN14 999 aa11.93□□□□□ -0.5
CLDN2-202ENST00000540876 C17orf53Q8N3J3 647 aaPredicted RBP11.93□□□□□ -0.5
CLDN2-202ENST00000540876 OGFRQ9NZT2 677 aa11.93□□□□□ -0.5
CLDN2-202ENST00000540876 PLEKHH1Q9ULM0 1364 aa11.93□□□□□ -0.5
CLDN2-202ENST00000540876 NCOA3Q9Y6Q9 1424 aa11.93□□□□□ -0.5
CLDN2-202ENST00000540876 HDGFP51858 240 aaKnown RBP11.93□□□□□ -0.5
CLDN2-202ENST00000540876 SLFN14P0C7P3 912 aa11.92□□□□□ -0.5
CLDN2-202ENST00000540876 NOLC1Q14978 699 aaKnown RBP eCLIP11.92□□□□□ -0.5
CLDN2-202ENST00000540876 WAPLQ7Z5K2 1190 aa11.92□□□□□ -0.5
CLDN2-202ENST00000540876 FEZ1Q99689 392 aa11.92□□□□□ -0.5
CLDN2-202ENST00000540876 MYCNP04198 464 aaPredicted RBP11.92□□□□□ -0.5
CLDN2-202ENST00000540876 SETD1BQ9UPS6 1966 aaKnown RBP11.92□□□□□ -0.5
CLDN2-202ENST00000540876 PARD3Q8TEW0 1356 aa11.92□□□□□ -0.5
CLDN2-202ENST00000540876 TMF1P82094 1093 aa11.91□□□□□ -0.5
CLDN2-202ENST00000540876 RBM27Q9P2N5 1060 aaKnown RBP11.91□□□□□ -0.5
CLDN2-202ENST00000540876 KCNG1Q9UIX4 513 aa11.91□□□□□ -0.5
CLDN2-202ENST00000540876 PPLO60437 1756 aa11.91□□□□□ -0.5
CLDN2-202ENST00000540876 PMFBP1Q8TBY8 1022 aa11.91□□□□□ -0.5
CLDN2-202ENST00000540876 DISP3Q9P2K9 1392 aa11.91□□□□□ -0.5
CLDN2-202ENST00000540876 MYOM2P54296 1465 aa11.91□□□□□ -0.5
CLDN2-202ENST00000540876 TNNT3P45378 269 aaPredicted RBP11.9□□□□□ -0.5
CLDN2-202ENST00000540876 SAMD1Q6SPF0 538 aaPredicted RBP11.9□□□□□ -0.5
CLDN2-202ENST00000540876 CNPY4Q8N129 248 aa11.9□□□□□ -0.51
CLDN2-202ENST00000540876 CALCOCO1Q9P1Z2 691 aa11.9□□□□□ -0.51
CLDN2-202ENST00000540876 NRXN1Q9ULB1 1477 aa11.9□□□□□ -0.51
CLDN2-202ENST00000540876 SOX12O15370 315 aa11.89□□□□□ -0.51
CLDN2-202ENST00000540876 HAP1P54257 671 aaPredicted RBP11.89□□□□□ -0.51
CLDN2-202ENST00000540876 SLFN5Q08AF3 891 aa11.89□□□□□ -0.51
CLDN2-202ENST00000540876 SNX21Q969T3 373 aa11.89□□□□□ -0.51
CLDN2-202ENST00000540876 LMTK3Q96Q04 1460 aa11.89□□□□□ -0.51
CLDN2-202ENST00000540876 PIBF1Q8WXW3 757 aa11.89□□□□□ -0.51
CLDN2-202ENST00000540876 PCDHB15Q9Y5E8 787 aa11.89□□□□□ -0.51
CLDN2-202ENST00000540876 SCAF11Q99590 1463 aaKnown RBP11.88□□□□□ -0.51
CLDN2-202ENST00000540876 SYCE3A1L190 88 aa11.88□□□□□ -0.51
CLDN2-202ENST00000540876 WDR43Q15061 677 aaKnown RBP eCLIP11.88□□□□□ -0.51
CLDN2-202ENST00000540876 PRAM1Q96QH2 718 aa11.88□□□□□ -0.51
CLDN2-202ENST00000540876 IFT172Q9UG01 1749 aa11.88□□□□□ -0.51
CLDN2-202ENST00000540876 NINLQ9Y2I6 1382 aa11.88□□□□□ -0.51
CLDN2-202ENST00000540876 TULP2O00295 520 aa11.88□□□□□ -0.51
CLDN2-202ENST00000540876 ANKRD7Q92527 254 aa11.88□□□□□ -0.51
CLDN2-202ENST00000540876 TRPM1Q7Z4N2 1603 aa11.88□□□□□ -0.51
CLDN2-202ENST00000540876 ADAMTS13Q76LX8 1427 aa11.88□□□□□ -0.51
CLDN2-202ENST00000540876 NEURL4Q96JN8 1562 aa11.87□□□□□ -0.51
CLDN2-202ENST00000540876 RIOK3O14730 519 aaKnown RBP11.87□□□□□ -0.51
CLDN2-202ENST00000540876 CHAF1AQ13111 956 aaPredicted RBP11.87□□□□□ -0.51
CLDN2-202ENST00000540876 PDE3AQ14432 1141 aa11.87□□□□□ -0.51
CLDN2-202ENST00000540876 WWC1Q8IX03 1113 aa11.87□□□□□ -0.51
CLDN2-202ENST00000540876 ARHGAP23Q9P227 1491 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms