RNA–Protein interactions for RNA: ENST00000540828.6

PTMS-205, Transcript of parathymosin, humanhuman

TSL 1 (best)

Gene PTMS, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-205ENST00000540828 NFAT5O94916 1531 aa29.56■■■□□ 2.32
PTMS-205ENST00000540828 CRB1P82279 1406 aa29.55■■■□□ 2.32
PTMS-205ENST00000540828 CDCA8Q53HL2 280 aa29.55■■■□□ 2.32
PTMS-205ENST00000540828 FAM182BQ5T319 152 aa29.54■■■□□ 2.32
PTMS-205ENST00000540828 USP54Q70EL1 1684 aa29.53■■■□□ 2.32
PTMS-205ENST00000540828 SF3B2Q13435 895 aaKnown RBP29.53■■■□□ 2.32
PTMS-205ENST00000540828 ANKRD36BQ8N2N9 1353 aa29.52■■■□□ 2.32
PTMS-205ENST00000540828 WDR17Q8IZU2 1322 aa29.51■■■□□ 2.32
PTMS-205ENST00000540828 TOM1L2Q6ZVM7 507 aa29.51■■■□□ 2.31
PTMS-205ENST00000540828 DEFB132Q7Z7B7 95 aa29.5■■■□□ 2.31
PTMS-205ENST00000540828 PDE3BQ13370 1112 aa29.49■■■□□ 2.31
PTMS-205ENST00000540828 OVOS2A0A0J9YW53 1432 aa29.47■■■□□ 2.31
PTMS-205ENST00000540828 OVOS2Q6IE36 1432 aa29.47■■■□□ 2.31
PTMS-205ENST00000540828 FAM196AQ6ZSG2 479 aa29.47■■■□□ 2.31
PTMS-205ENST00000540828 CARD10Q9BWT7 1032 aa29.46■■■□□ 2.31
PTMS-205ENST00000540828 ABCC6O95255 1503 aa29.45■■■□□ 2.31
PTMS-205ENST00000540828 RGPD5Q99666 1765 aa29.45■■■□□ 2.31
PTMS-205ENST00000540828 CSB-PGBD3P0DP91 1061 aa29.45■■■□□ 2.31
PTMS-205ENST00000540828 COG3Q96JB2 828 aa29.43■■■□□ 2.3
PTMS-205ENST00000540828 BAG6P46379 1132 aa29.41■■■□□ 2.3
PTMS-205ENST00000540828 FYB1O15117 783 aa29.4■■■□□ 2.3
PTMS-205ENST00000540828 EIF4G2P78344 907 aaKnown RBP eCLIP29.4■■■□□ 2.34e-8■■■■□ 19.3
PTMS-205ENST00000540828 CDCA7Q9BWT1 371 aaPredicted RBP29.4■■■□□ 2.3
PTMS-205ENST00000540828 PARP4Q9UKK3 1724 aaKnown RBP29.4■■■□□ 2.3
PTMS-205ENST00000540828 TRIM37O94972 964 aa29.38■■■□□ 2.29
PTMS-205ENST00000540828 HSPA5P11021 654 aaKnown RBP29.37■■■□□ 2.29
PTMS-205ENST00000540828 DDB1Q16531 1140 aa29.37■■■□□ 2.29
PTMS-205ENST00000540828 IP6K1Q92551 441 aa29.37■■■□□ 2.29
PTMS-205ENST00000540828 ERBB3P21860 1342 aa29.37■■■□□ 2.29
PTMS-205ENST00000540828 CARD14Q9BXL6 1004 aa29.36■■■□□ 2.29
PTMS-205ENST00000540828 CCDC7Q96M83 1385 aa29.36■■■□□ 2.29
PTMS-205ENST00000540828 LTN1O94822 1766 aa29.36■■■□□ 2.29
PTMS-205ENST00000540828 RGPD1P0DJD0 1748 aa29.35■■■□□ 2.29
PTMS-205ENST00000540828 C11orf95C9JLR9 678 aaPredicted RBP29.35■■■□□ 2.29
PTMS-205ENST00000540828 ANKRD24Q8TF21 1146 aa29.35■■■□□ 2.29
PTMS-205ENST00000540828 GGNBP2Q9H3C7 697 aa29.35■■■□□ 2.29
PTMS-205ENST00000540828 EN1Q05925 392 aaPredicted RBP29.34■■■□□ 2.29
PTMS-205ENST00000540828 FBLN1P23142 703 aa29.33■■■□□ 2.29
PTMS-205ENST00000540828 NLRP2Q9NX02 1062 aa29.33■■■□□ 2.29
PTMS-205ENST00000540828 DISP2A7MBM2 1401 aa29.33■■■□□ 2.29
PTMS-205ENST00000540828 MAP3K19Q56UN5 1328 aa29.32■■■□□ 2.28
PTMS-205ENST00000540828 MYOM1P52179 1685 aa29.3■■■□□ 2.28
PTMS-205ENST00000540828 EXOC5O00471 708 aa29.29■■■□□ 2.28
PTMS-205ENST00000540828 APBA3O96018 575 aa29.29■■■□□ 2.28
PTMS-205ENST00000540828 LRRC37A3O60309 1634 aa29.29■■■□□ 2.28
PTMS-205ENST00000540828 TNS1Q9HBL0 1735 aaKnown RBP29.28■■■□□ 2.28
PTMS-205ENST00000540828 HOXC9P31274 260 aa29.28■■■□□ 2.28
PTMS-205ENST00000540828 AMPHP49418 695 aa29.28■■■□□ 2.28
PTMS-205ENST00000540828 MARCH10Q8NA82 808 aaPredicted RBP29.28■■■□□ 2.28
PTMS-205ENST00000540828 WNK3Q9BYP7 1800 aa29.27■■■□□ 2.28
PTMS-205ENST00000540828 CAMKK2Q96RR4 588 aa29.27■■■□□ 2.28
PTMS-205ENST00000540828 OVOS2A0A0G2JMS6 1433 aa29.27■■■□□ 2.28
PTMS-205ENST00000540828 POLR3GLQ9BT43 218 aa29.26■■■□□ 2.27
PTMS-205ENST00000540828 EZH2Q15910 746 aaKnown RBP29.25■■■□□ 2.27
PTMS-205ENST00000540828 NSD3Q9BZ95 1437 aa29.25■■■□□ 2.27
PTMS-205ENST00000540828 PEAK1Q9H792 1746 aa29.25■■■□□ 2.27
PTMS-205ENST00000540828 RRS1Q15050 365 aaKnown RBP29.24■■■□□ 2.27
PTMS-205ENST00000540828 LTV1Q96GA3 475 aaPredicted RBP29.24■■■□□ 2.27
PTMS-205ENST00000540828 IL2RBP14784 551 aa29.23■■■□□ 2.27
PTMS-205ENST00000540828 BCL9O00512 1426 aa29.22■■■□□ 2.27
PTMS-205ENST00000540828 RTL1A6NKG5 1358 aa29.2■■■□□ 2.26
PTMS-205ENST00000540828 PARD3Q8TEW0 1356 aa29.2■■■□□ 2.26
PTMS-205ENST00000540828 KIF20BQ96Q89 1820 aa29.2■■■□□ 2.26
PTMS-205ENST00000540828 BCL11BQ9C0K0 894 aaPredicted RBP29.18■■■□□ 2.26
PTMS-205ENST00000540828 TNS2Q63HR2 1409 aa29.18■■■□□ 2.26
PTMS-205ENST00000540828 CGNL1Q0VF96 1302 aa29.18■■■□□ 2.26
PTMS-205ENST00000540828 SBF2Q86WG5 1849 aa29.15■■■□□ 2.26
PTMS-205ENST00000540828 PTF1AQ7RTS3 328 aa29.15■■■□□ 2.26
PTMS-205ENST00000540828 PANK3Q9H999 370 aa29.15■■■□□ 2.26
PTMS-205ENST00000540828 KIF24Q5T7B8 1368 aa29.14■■■□□ 2.26
PTMS-205ENST00000540828 FAM208AQ9UK61 1670 aaKnown RBP29.14■■■□□ 2.26
PTMS-205ENST00000540828 HSP90AB2PQ58FF8 381 aa29.13■■■□□ 2.25
PTMS-205ENST00000540828 PSDA5PKW4 1024 aaPredicted RBP29.12■■■□□ 2.25
PTMS-205ENST00000540828 PLSCR1O15162 318 aa29.12■■■□□ 2.25
PTMS-205ENST00000540828 INSRP06213 1382 aa29.12■■■□□ 2.25
PTMS-205ENST00000540828 NBPF6Q5VWK0 638 aa29.11■■■□□ 2.25
PTMS-205ENST00000540828 NBPF4Q96M43 638 aa29.11■■■□□ 2.25
PTMS-205ENST00000540828 FLT4P35916 1363 aa29.1■■■□□ 2.25
PTMS-205ENST00000540828 EMILIN1Q9Y6C2 1016 aa29.09■■■□□ 2.25
PTMS-205ENST00000540828 R3HDM1Q15032 1099 aaKnown RBP29.07■■■□□ 2.24
PTMS-205ENST00000540828 KCNQ2O43526 872 aa29.06■■■□□ 2.24
PTMS-205ENST00000540828 RGPD2P0DJD1 1756 aa29.06■■■□□ 2.24
PTMS-205ENST00000540828 RREB1Q92766 1687 aa29.05■■■□□ 2.24
PTMS-205ENST00000540828 SMG6Q86US8 1419 aaKnown RBP29.05■■■□□ 2.24
PTMS-205ENST00000540828 NBPF14Q5TI25 921 aa29.04■■■□□ 2.24
PTMS-205ENST00000540828 DDX54Q8TDD1 881 aaKnown RBP29.04■■■□□ 2.24
PTMS-205ENST00000540828 POLKQ9UBT6 870 aa29.04■■■□□ 2.24
PTMS-205ENST00000540828 WASHC2AQ641Q2 1341 aa29.03■■■□□ 2.24
PTMS-205ENST00000540828 ZCRB1Q8TBF4 217 aaKnown RBP29.03■■■□□ 2.24
PTMS-205ENST00000540828 ACSBG1Q96GR2 724 aa29.03■■■□□ 2.24
PTMS-205ENST00000540828 PPM1GO15355 546 aaPredicted RBP29.02■■■□□ 2.24
PTMS-205ENST00000540828 PROM2Q8N271 834 aa29.02■■■□□ 2.24
PTMS-205ENST00000540828 USHBP1Q8N6Y0 703 aa29.02■■■□□ 2.24
PTMS-205ENST00000540828 SRCAPQ6ZRS2 3230 aa29.02■■■□□ 2.24
PTMS-205ENST00000540828 KIF7Q2M1P5 1343 aa29.01■■■□□ 2.23
PTMS-205ENST00000540828 RGPD3A6NKT7 1758 aaPredicted RBP29■■■□□ 2.23
PTMS-205ENST00000540828 RGPD4Q7Z3J3 1758 aa29■■■□□ 2.23
PTMS-205ENST00000540828 NUP188Q5SRE5 1749 aa29■■■□□ 2.23
PTMS-205ENST00000540828 MEGF6O75095 1541 aa28.99■■■□□ 2.23
PTMS-205ENST00000540828 MAP2P11137 1827 aaKnown RBP28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms