RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 ST20-MTHFSA0A0A6YYL1 179 aa20.5■□□□□ 0.87
MSRB3-209ENST00000540804 CAMKK2Q96RR4 588 aa20.5■□□□□ 0.87
MSRB3-209ENST00000540804 WDR17Q8IZU2 1322 aa20.5■□□□□ 0.87
MSRB3-209ENST00000540804 TESK2Q96S53 571 aa20.49■□□□□ 0.87
MSRB3-209ENST00000540804 DISP2A7MBM2 1401 aa20.49■□□□□ 0.87
MSRB3-209ENST00000540804 MON2Q7Z3U7 1717 aa20.48■□□□□ 0.87
MSRB3-209ENST00000540804 R3HDM1Q15032 1099 aaKnown RBP20.48■□□□□ 0.87
MSRB3-209ENST00000540804 CSB-PGBD3P0DP91 1061 aa20.47■□□□□ 0.87
MSRB3-209ENST00000540804 HDGFL2Q7Z4V5 671 aaPredicted RBP20.47■□□□□ 0.87
MSRB3-209ENST00000540804 A0A1W2PP64 1363 aa20.46■□□□□ 0.87
MSRB3-209ENST00000540804 USP31Q70CQ4 1352 aa20.46■□□□□ 0.87
MSRB3-209ENST00000540804 PARP4Q9UKK3 1724 aaKnown RBP20.45■□□□□ 0.86
MSRB3-209ENST00000540804 DDB1Q16531 1140 aa20.45■□□□□ 0.86
MSRB3-209ENST00000540804 PTF1AQ7RTS3 328 aa20.45■□□□□ 0.86
MSRB3-209ENST00000540804 LRRC37A3O60309 1634 aa20.43■□□□□ 0.86
MSRB3-209ENST00000540804 MARCH10Q8NA82 808 aaPredicted RBP20.43■□□□□ 0.86
MSRB3-209ENST00000540804 CARD10Q9BWT7 1032 aa20.43■□□□□ 0.86
MSRB3-209ENST00000540804 RGPD5Q99666 1765 aa20.43■□□□□ 0.86
MSRB3-209ENST00000540804 TERF2IPQ9NYB0 399 aa20.42■□□□□ 0.86
MSRB3-209ENST00000540804 EDC4Q6P2E9 1401 aaKnown RBP20.42■□□□□ 0.86
MSRB3-209ENST00000540804 OVOS2A0A0G2JMS6 1433 aa20.4■□□□□ 0.86
MSRB3-209ENST00000540804 OVOS2A0A0J9YW53 1432 aa20.4■□□□□ 0.86
MSRB3-209ENST00000540804 OVOS2Q6IE36 1432 aa20.4■□□□□ 0.86
MSRB3-209ENST00000540804 PUS7Q96PZ0 661 aaKnown RBP20.4■□□□□ 0.86
MSRB3-209ENST00000540804 PEAK1Q9H792 1746 aa20.4■□□□□ 0.86
MSRB3-209ENST00000540804 FBLN1P23142 703 aa20.39■□□□□ 0.85
MSRB3-209ENST00000540804 PCGF6Q9BYE7 350 aa20.38■□□□□ 0.85
MSRB3-209ENST00000540804 USP47Q96K76 1375 aa20.37■□□□□ 0.85
MSRB3-209ENST00000540804 ANKRD24Q8TF21 1146 aa20.37■□□□□ 0.85
MSRB3-209ENST00000540804 NLRP2Q9NX02 1062 aa20.37■□□□□ 0.85
MSRB3-209ENST00000540804 USP54Q70EL1 1684 aa20.36■□□□□ 0.85
MSRB3-209ENST00000540804 ERBB3P21860 1342 aa20.36■□□□□ 0.85
MSRB3-209ENST00000540804 WNK3Q9BYP7 1800 aa20.36■□□□□ 0.85
MSRB3-209ENST00000540804 PARD3Q8TEW0 1356 aa20.35■□□□□ 0.85
MSRB3-209ENST00000540804 EXOC5O00471 708 aa20.35■□□□□ 0.85
MSRB3-209ENST00000540804 CDCA7Q9BWT1 371 aaPredicted RBP20.35■□□□□ 0.85
MSRB3-209ENST00000540804 LRP5O75197 1615 aa20.35■□□□□ 0.85
MSRB3-209ENST00000540804 CCDC7Q96M83 1385 aa20.34■□□□□ 0.85
MSRB3-209ENST00000540804 RREB1Q92766 1687 aa20.34■□□□□ 0.85
MSRB3-209ENST00000540804 NUP188Q5SRE5 1749 aa20.33■□□□□ 0.85
MSRB3-209ENST00000540804 ABCC6O95255 1503 aa20.33■□□□□ 0.85
MSRB3-209ENST00000540804 LTV1Q96GA3 475 aaPredicted RBP20.33■□□□□ 0.85
MSRB3-209ENST00000540804 TMF1P82094 1093 aa20.32■□□□□ 0.84
MSRB3-209ENST00000540804 BCL11BQ9C0K0 894 aaPredicted RBP20.32■□□□□ 0.84
MSRB3-209ENST00000540804 NINLQ9Y2I6 1382 aa20.32■□□□□ 0.84
MSRB3-209ENST00000540804 LTN1O94822 1766 aa20.31■□□□□ 0.84
MSRB3-209ENST00000540804 C11orf95C9JLR9 678 aaPredicted RBP20.31■□□□□ 0.84
MSRB3-209ENST00000540804 KCNQ2O43526 872 aa20.31■□□□□ 0.84
MSRB3-209ENST00000540804 COG3Q96JB2 828 aa20.31■□□□□ 0.84
MSRB3-209ENST00000540804 TNS2Q63HR2 1409 aa20.3■□□□□ 0.84
MSRB3-209ENST00000540804 NBPF14Q5TI25 921 aa20.3■□□□□ 0.84
MSRB3-209ENST00000540804 PROM2Q8N271 834 aa20.3■□□□□ 0.84
MSRB3-209ENST00000540804 IP6K1Q92551 441 aa20.3■□□□□ 0.84
MSRB3-209ENST00000540804 ACSBG1Q96GR2 724 aa20.3■□□□□ 0.84
MSRB3-209ENST00000540804 ANKRD36BQ8N2N9 1353 aa20.3■□□□□ 0.84
MSRB3-209ENST00000540804 MAP3K19Q56UN5 1328 aa20.29■□□□□ 0.84
MSRB3-209ENST00000540804 PLSCR1O15162 318 aa20.29■□□□□ 0.84
MSRB3-209ENST00000540804 GGNBP2Q9H3C7 697 aa20.29■□□□□ 0.84
MSRB3-209ENST00000540804 ANO8Q9HCE9 1232 aaPredicted RBP20.29■□□□□ 0.84
MSRB3-209ENST00000540804 SBF2Q86WG5 1849 aa20.28■□□□□ 0.84
MSRB3-209ENST00000540804 IL2RBP14784 551 aa20.28■□□□□ 0.84
MSRB3-209ENST00000540804 BCL9O00512 1426 aa20.27■□□□□ 0.84
MSRB3-209ENST00000540804 FYB1O15117 783 aa20.27■□□□□ 0.84
MSRB3-209ENST00000540804 SLC24A1O60721 1099 aa20.26■□□□□ 0.83
MSRB3-209ENST00000540804 HOXC9P31274 260 aa20.26■□□□□ 0.83
MSRB3-209ENST00000540804 RRS1Q15050 365 aaKnown RBP20.26■□□□□ 0.83
MSRB3-209ENST00000540804 AMPHP49418 695 aa20.24■□□□□ 0.83
MSRB3-209ENST00000540804 PDGFDQ9GZP0 370 aaPredicted RBP20.24■□□□□ 0.83
MSRB3-209ENST00000540804 CARD14Q9BXL6 1004 aa20.23■□□□□ 0.83
MSRB3-209ENST00000540804 TXNRD1Q16881 649 aa20.22■□□□□ 0.83
MSRB3-209ENST00000540804 DDX54Q8TDD1 881 aaKnown RBP20.21■□□□□ 0.83
MSRB3-209ENST00000540804 USHBP1Q8N6Y0 703 aa20.2■□□□□ 0.82
MSRB3-209ENST00000540804 TIMELESSQ9UNS1 1208 aa20.2■□□□□ 0.82
MSRB3-209ENST00000540804 RGPD3A6NKT7 1758 aaPredicted RBP20.18■□□□□ 0.82
MSRB3-209ENST00000540804 RGPD4Q7Z3J3 1758 aa20.18■□□□□ 0.82
MSRB3-209ENST00000540804 CDCA8Q53HL2 280 aa20.18■□□□□ 0.82
MSRB3-209ENST00000540804 NBPF6Q5VWK0 638 aa20.18■□□□□ 0.82
MSRB3-209ENST00000540804 NBPF4Q96M43 638 aa20.18■□□□□ 0.82
MSRB3-209ENST00000540804 POLR3GLQ9BT43 218 aa20.17■□□□□ 0.82
MSRB3-209ENST00000540804 CLSPNQ9HAW4 1339 aa20.17■□□□□ 0.82
MSRB3-209ENST00000540804 NSD3Q9BZ95 1437 aa20.17■□□□□ 0.82
MSRB3-209ENST00000540804 MYOM1P52179 1685 aa20.16■□□□□ 0.82
MSRB3-209ENST00000540804 NHSQ6T4R5 1651 aa20.16■□□□□ 0.82
MSRB3-209ENST00000540804 HSP90AB2PQ58FF8 381 aa20.16■□□□□ 0.82
MSRB3-209ENST00000540804 SPON1Q9HCB6 807 aa20.16■□□□□ 0.82
MSRB3-209ENST00000540804 MEGF6O75095 1541 aa20.16■□□□□ 0.82
MSRB3-209ENST00000540804 FAM208AQ9UK61 1670 aaKnown RBP20.16■□□□□ 0.82
MSRB3-209ENST00000540804 ZBTB7AO95365 584 aa20.15■□□□□ 0.82
MSRB3-209ENST00000540804 RGPD2P0DJD1 1756 aa20.14■□□□□ 0.81
MSRB3-209ENST00000540804 RTL1A6NKG5 1358 aa20.14■□□□□ 0.81
MSRB3-209ENST00000540804 SLC15A2Q16348 729 aa20.14■□□□□ 0.81
MSRB3-209ENST00000540804 STK32BQ9NY57 414 aa20.14■□□□□ 0.81
MSRB3-209ENST00000540804 EMILIN1Q9Y6C2 1016 aa20.14■□□□□ 0.81
MSRB3-209ENST00000540804 CCER1Q8TC90 406 aaPredicted RBP20.13■□□□□ 0.81
MSRB3-209ENST00000540804 LRRC4BQ9NT99 713 aa20.12■□□□□ 0.81
MSRB3-209ENST00000540804 PPP1R1BQ9UD71 204 aaPredicted RBP20.12■□□□□ 0.81
MSRB3-209ENST00000540804 HSPA5P11021 654 aaKnown RBP20.11■□□□□ 0.81
MSRB3-209ENST00000540804 PRIM1P49642 420 aaKnown RBP20.11■□□□□ 0.81
MSRB3-209ENST00000540804 KCNQ4P56696 695 aa20.11■□□□□ 0.81
MSRB3-209ENST00000540804 ZCRB1Q8TBF4 217 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 514.8 ms