RNA–Protein interactions for RNA: ENST00000540802.1

SOX9-AS1-214, SOX9 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene SOX9-AS1, Length 578 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-214ENST00000540802 ZFAND3Q9H8U3 227 aa9.46□□□□□ -0.9
SOX9-AS1-214ENST00000540802 SOCS7O14512 581 aa9.45□□□□□ -0.9
SOX9-AS1-214ENST00000540802 MRPL14Q6P1L8 145 aaKnown RBP9.45□□□□□ -0.9
SOX9-AS1-214ENST00000540802 ZFP42Q96MM3 310 aa9.45□□□□□ -0.9
SOX9-AS1-214ENST00000540802 LCE2AQ5TA79 106 aaPredicted RBP9.44□□□□□ -0.9
SOX9-AS1-214ENST00000540802 CCDC116Q8IYX3 515 aa9.44□□□□□ -0.9
SOX9-AS1-214ENST00000540802 SLC10A4Q96EP9 437 aa9.44□□□□□ -0.9
SOX9-AS1-214ENST00000540802 KCTD15Q96SI1 283 aaPredicted RBP9.44□□□□□ -0.9
SOX9-AS1-214ENST00000540802 EMILIN1Q9Y6C2 1016 aa9.44□□□□□ -0.9
SOX9-AS1-214ENST00000540802 TREML4Q6UXN2 200 aa9.43□□□□□ -0.9
SOX9-AS1-214ENST00000540802 SCARF1Q14162 830 aa9.41□□□□□ -0.9
SOX9-AS1-214ENST00000540802 MEIOBQ8N635 442 aa9.41□□□□□ -0.9
SOX9-AS1-214ENST00000540802 NFX1Q12986 1120 aaKnown RBP9.4□□□□□ -0.9
SOX9-AS1-214ENST00000540802 PPP1R26Q5T8A7 1209 aaPredicted RBP9.4□□□□□ -0.9
SOX9-AS1-214ENST00000540802 MTMR14Q8NCE2 650 aa9.4□□□□□ -0.9
SOX9-AS1-214ENST00000540802 PURBQ96QR8 312 aaKnown RBP9.4□□□□□ -0.9
SOX9-AS1-214ENST00000540802 ZBBXA8MT70 800 aa9.39□□□□□ -0.91
SOX9-AS1-214ENST00000540802 INTS6LQ5JSJ4 861 aaKnown RBP9.39□□□□□ -0.91
SOX9-AS1-214ENST00000540802 SNRKQ9NRH2 765 aa9.39□□□□□ -0.91
SOX9-AS1-214ENST00000540802 GPR37L1O60883 481 aa9.38□□□□□ -0.91
SOX9-AS1-214ENST00000540802 DHX9Q08211 1270 aaKnown RBP9.38□□□□□ -0.91
SOX9-AS1-214ENST00000540802 DZIP3Q86Y13 1208 aaKnown RBP9.38□□□□□ -0.91
SOX9-AS1-214ENST00000540802 PGPEP1Q9NXJ5 209 aa9.38□□□□□ -0.91
SOX9-AS1-214ENST00000540802 ESPNB1AK53 854 aa9.37□□□□□ -0.91
SOX9-AS1-214ENST00000540802 TERTO14746 1132 aaKnown RBP9.37□□□□□ -0.91
SOX9-AS1-214ENST00000540802 NBPF20Q3BBV1 942 aa9.37□□□□□ -0.91
SOX9-AS1-214ENST00000540802 Q6ZVU0 165 aa9.37□□□□□ -0.91
SOX9-AS1-214ENST00000540802 WFS1O76024 890 aa9.36□□□□□ -0.91
SOX9-AS1-214ENST00000540802 FBXO45P0C2W1 286 aa9.36□□□□□ -0.91
SOX9-AS1-214ENST00000540802 LINC00528Q8N1L1 170 aa9.36□□□□□ -0.91
SOX9-AS1-214ENST00000540802 TSEN34Q9BSV6 310 aaKnown RBP9.36□□□□□ -0.91
SOX9-AS1-214ENST00000540802 UPP2O95045 317 aa9.34□□□□□ -0.91
SOX9-AS1-214ENST00000540802 CBLBQ13191 982 aa9.34□□□□□ -0.91
SOX9-AS1-214ENST00000540802 C6orf118Q5T5N4 469 aa9.34□□□□□ -0.91
SOX9-AS1-214ENST00000540802 NXF1Q9UBU9 619 aaKnown RBP9.34□□□□□ -0.91
SOX9-AS1-214ENST00000540802 NDUFB9Q9Y6M9 179 aa9.34□□□□□ -0.91
SOX9-AS1-214ENST00000540802 APBB1O00213 710 aa9.33□□□□□ -0.92
SOX9-AS1-214ENST00000540802 BMP2P12643 396 aa9.33□□□□□ -0.92
SOX9-AS1-214ENST00000540802 NR1H3Q13133 447 aa9.33□□□□□ -0.92
SOX9-AS1-214ENST00000540802 SEPT12Q8IYM1 358 aa9.33□□□□□ -0.92
SOX9-AS1-214ENST00000540802 LCE2CQ5TA81 110 aa9.32□□□□□ -0.92
SOX9-AS1-214ENST00000540802 NPAS3Q8IXF0 933 aa9.32□□□□□ -0.92
SOX9-AS1-214ENST00000540802 TMPRSS4Q9NRS4 437 aa9.32□□□□□ -0.92
SOX9-AS1-214ENST00000540802 SOS2Q07890 1332 aaPredicted RBP9.31□□□□□ -0.92
SOX9-AS1-214ENST00000540802 ERVH48-1M5A8F1 160 aa9.31□□□□□ -0.92
SOX9-AS1-214ENST00000540802 MCCD1P59942 119 aaPredicted RBP9.31□□□□□ -0.92
SOX9-AS1-214ENST00000540802 PCDHB9Q9Y5E1 797 aa9.31□□□□□ -0.92
SOX9-AS1-214ENST00000540802 SOBPA7XYQ1 873 aa9.3□□□□□ -0.92
SOX9-AS1-214ENST00000540802 LILRA1O75019 489 aa9.3□□□□□ -0.92
SOX9-AS1-214ENST00000540802 GIGYF1O75420 1035 aaPredicted RBP9.3□□□□□ -0.92
SOX9-AS1-214ENST00000540802 SPINT1O43278 529 aa9.29□□□□□ -0.92
SOX9-AS1-214ENST00000540802 ZNF784Q8NCA9 323 aaPredicted RBP9.29□□□□□ -0.92
SOX9-AS1-214ENST00000540802 MAN1A2O60476 641 aa9.28□□□□□ -0.92
SOX9-AS1-214ENST00000540802 ADD1P35611 737 aaKnown RBP9.28□□□□□ -0.92
SOX9-AS1-214ENST00000540802 RAB15P59190 212 aa9.28□□□□□ -0.92
SOX9-AS1-214ENST00000540802 CCDC125Q86Z20 511 aa9.28□□□□□ -0.92
SOX9-AS1-214ENST00000540802 H3BM21 787 aa9.27□□□□□ -0.93
SOX9-AS1-214ENST00000540802 WIPF1O43516 503 aa9.27□□□□□ -0.93
SOX9-AS1-214ENST00000540802 SLC16A10Q8TF71 515 aa9.27□□□□□ -0.93
SOX9-AS1-214ENST00000540802 ZNF592Q92610 1267 aa9.27□□□□□ -0.93
SOX9-AS1-214ENST00000540802 AGBL1Q96MI9 1066 aa9.27□□□□□ -0.93
SOX9-AS1-214ENST00000540802 DNMT3LQ9UJW3 386 aa9.27□□□□□ -0.93
SOX9-AS1-214ENST00000540802 TBC1D2BQ9UPU7 963 aa9.27□□□□□ -0.93
SOX9-AS1-214ENST00000540802 KDF1Q8NAX2 398 aaPredicted RBP9.26□□□□□ -0.93
SOX9-AS1-214ENST00000540802 ZNF330Q9Y3S2 320 aaPredicted RBP9.26□□□□□ -0.93
SOX9-AS1-214ENST00000540802 TTLL8A6PVC2 850 aa9.25□□□□□ -0.93
SOX9-AS1-214ENST00000540802 PRM3Q9NNZ6 103 aa9.25□□□□□ -0.93
SOX9-AS1-214ENST00000540802 ADH1AP07327 375 aa9.24□□□□□ -0.93
SOX9-AS1-214ENST00000540802 VEGFBP49765 207 aa9.24□□□□□ -0.93
SOX9-AS1-214ENST00000540802 RELBQ01201 579 aa9.24□□□□□ -0.93
SOX9-AS1-214ENST00000540802 IRF5Q13568 498 aa9.24□□□□□ -0.93
SOX9-AS1-214ENST00000540802 RNF20Q5VTR2 975 aa9.24□□□□□ -0.93
SOX9-AS1-214ENST00000540802 TRIM52Q96A61 297 aa9.24□□□□□ -0.93
SOX9-AS1-214ENST00000540802 PTGIRP43119 386 aa9.23□□□□□ -0.93
SOX9-AS1-214ENST00000540802 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.23□□□□□ -0.93
SOX9-AS1-214ENST00000540802 CTSOP43234 321 aaPredicted RBP9.22□□□□□ -0.93
SOX9-AS1-214ENST00000540802 IRF7Q92985 503 aa9.22□□□□□ -0.93
SOX9-AS1-214ENST00000540802 CYLDQ9NQC7 956 aa9.22□□□□□ -0.93
SOX9-AS1-214ENST00000540802 FIGNL2A6NMB9 653 aa9.21□□□□□ -0.94
SOX9-AS1-214ENST00000540802 ERVK-9P63128 1117 aa9.21□□□□□ -0.94
SOX9-AS1-214ENST00000540802 INSM2Q96T92 566 aaPredicted RBP9.21□□□□□ -0.94
SOX9-AS1-214ENST00000540802 ZNF395Q9H8N7 513 aaPredicted RBP9.21□□□□□ -0.94
SOX9-AS1-214ENST00000540802 CEP126Q9P2H0 1117 aa9.21□□□□□ -0.94
SOX9-AS1-214ENST00000540802 PPFIA3O75145 1194 aa9.2□□□□□ -0.94
SOX9-AS1-214ENST00000540802 MCM6Q14566 821 aa9.2□□□□□ -0.94
SOX9-AS1-214ENST00000540802 ERBB4Q15303 1308 aa9.2□□□□□ -0.94
SOX9-AS1-214ENST00000540802 VSIG8P0DPA2 414 aa9.19□□□□□ -0.94
SOX9-AS1-214ENST00000540802 GDPD2Q9HCC8 539 aa9.19□□□□□ -0.94
SOX9-AS1-214ENST00000540802 GMPRP36959 345 aa9.18□□□□□ -0.94
SOX9-AS1-214ENST00000540802 PTSQ03393 145 aa9.18□□□□□ -0.94
SOX9-AS1-214ENST00000540802 CC2D2BQ6DHV5 1058 aa9.18□□□□□ -0.94
SOX9-AS1-214ENST00000540802 RNF217Q8TC41 542 aa9.18□□□□□ -0.94
SOX9-AS1-214ENST00000540802 EIF4G2P78344 907 aaKnown RBP eCLIP9.17□□□□□ -0.94
SOX9-AS1-214ENST00000540802 PHTF2Q8N3S3 785 aa9.17□□□□□ -0.94
SOX9-AS1-214ENST00000540802 POLMQ9NP87 494 aaPredicted RBP9.17□□□□□ -0.94
SOX9-AS1-214ENST00000540802 ATP5J2-PTCD1G3V325 749 aa9.16□□□□□ -0.94
SOX9-AS1-214ENST00000540802 TRAK2O60296 914 aa9.16□□□□□ -0.94
SOX9-AS1-214ENST00000540802 SCTRP47872 440 aa9.16□□□□□ -0.94
SOX9-AS1-214ENST00000540802 FOXD4L5Q5VV16 416 aaPredicted RBP9.16□□□□□ -0.94
SOX9-AS1-214ENST00000540802 PCDHB11Q9Y5F2 797 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms