RNA–Protein interactions for RNA: ENST00000540781.5

RAP1B-222, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-222	ENST00000540781	ANKRD36B	Q8N2N9	1353 aa		27.79	■■■□□ 2.04
RAP1B-222	ENST00000540781	BLM	P54132	1417 aa	Predicted RBP	27.77	■■■□□ 2.04
RAP1B-222	ENST00000540781	CRB1	P82279	1406 aa		27.77	■■■□□ 2.04
RAP1B-222	ENST00000540781	THRAP3	Q9Y2W1	955 aa	Known RBP	27.77	■■■□□ 2.04
RAP1B-222	ENST00000540781	TOM1L2	Q6ZVM7	507 aa		27.76	■■■□□ 2.03
RAP1B-222	ENST00000540781	WDR17	Q8IZU2	1322 aa		27.74	■■■□□ 2.03
RAP1B-222	ENST00000540781	EIF4G2	P78344	907 aa	Known RBP eCLIP	27.74	■■■□□ 2.03
RAP1B-222	ENST00000540781	SF3B2	Q13435	895 aa	Known RBP	27.74	■■■□□ 2.03
RAP1B-222	ENST00000540781	FAM182B	Q5T319	152 aa		27.74	■■■□□ 2.03
RAP1B-222	ENST00000540781	OVOS2	A0A0J9YW53	1432 aa		27.74	■■■□□ 2.03
RAP1B-222	ENST00000540781	OVOS2	Q6IE36	1432 aa		27.74	■■■□□ 2.03
RAP1B-222	ENST00000540781	RGPD5	Q99666	1765 aa		27.73	■■■□□ 2.03
RAP1B-222	ENST00000540781	CSB-PGBD3	P0DP91	1061 aa		27.72	■■■□□ 2.03
RAP1B-222	ENST00000540781	COG3	Q96JB2	828 aa		27.72	■■■□□ 2.03
RAP1B-222	ENST00000540781	EP400	Q96L91	3159 aa		27.72	■■■□□ 2.03
RAP1B-222	ENST00000540781	HSPA5	P11021	654 aa	Known RBP	27.71	■■■□□ 2.03
RAP1B-222	ENST00000540781	PDE3B	Q13370	1112 aa		27.7	■■■□□ 2.02
RAP1B-222	ENST00000540781	ABCC6	O95255	1503 aa		27.7	■■■□□ 2.02
RAP1B-222	ENST00000540781	LTN1	O94822	1766 aa		27.68	■■■□□ 2.02
RAP1B-222	ENST00000540781	DEFB132	Q7Z7B7	95 aa		27.67	■■■□□ 2.02
RAP1B-222	ENST00000540781	POLR3GL	Q9BT43	218 aa		27.66	■■■□□ 2.02
RAP1B-222	ENST00000540781	CARD10	Q9BWT7	1032 aa		27.66	■■■□□ 2.02
RAP1B-222	ENST00000540781	FYB1	O15117	783 aa		27.65	■■■□□ 2.02
RAP1B-222	ENST00000540781	FAM196A	Q6ZSG2	479 aa		27.65	■■■□□ 2.02
RAP1B-222	ENST00000540781	MYOM1	P52179	1685 aa		27.65	■■■□□ 2.02
RAP1B-222	ENST00000540781	GGNBP2	Q9H3C7	697 aa		27.64	■■■□□ 2.02
RAP1B-222	ENST00000540781	PARP4	Q9UKK3	1724 aa	Known RBP	27.64	■■■□□ 2.01
RAP1B-222	ENST00000540781	CARD14	Q9BXL6	1004 aa		27.62	■■■□□ 2.01
RAP1B-222	ENST00000540781	BAG6	P46379	1132 aa		27.61	■■■□□ 2.01
RAP1B-222	ENST00000540781	CDCA7	Q9BWT1	371 aa	Predicted RBP	27.61	■■■□□ 2.01
RAP1B-222	ENST00000540781	ERBB3	P21860	1342 aa		27.61	■■■□□ 2.01
RAP1B-222	ENST00000540781	DDB1	Q16531	1140 aa		27.6	■■■□□ 2.01
RAP1B-222	ENST00000540781	ANKRD24	Q8TF21	1146 aa		27.6	■■■□□ 2.01
RAP1B-222	ENST00000540781	IP6K1	Q92551	441 aa		27.6	■■■□□ 2.01
RAP1B-222	ENST00000540781	NLRP2	Q9NX02	1062 aa		27.6	■■■□□ 2.01
RAP1B-222	ENST00000540781	RGPD1	P0DJD0	1748 aa		27.6	■■■□□ 2.01
RAP1B-222	ENST00000540781	CCDC7	Q96M83	1385 aa		27.6	■■■□□ 2.01
RAP1B-222	ENST00000540781	FBLN1	P23142	703 aa		27.59	■■■□□ 2.01
RAP1B-222	ENST00000540781	NSD3	Q9BZ95	1437 aa		27.58	■■■□□ 2.01
RAP1B-222	ENST00000540781	MAP3K19	Q56UN5	1328 aa		27.58	■■■□□ 2.01
RAP1B-222	ENST00000540781	WNK3	Q9BYP7	1800 aa		27.57	■■■□□ 2
RAP1B-222	ENST00000540781	TRIM37	O94972	964 aa		27.57	■■■□□ 2
RAP1B-222	ENST00000540781	AMPH	P49418	695 aa		27.57	■■■□□ 2
RAP1B-222	ENST00000540781	KIF20B	Q96Q89	1820 aa		27.57	■■■□□ 2
RAP1B-222	ENST00000540781	LRRC37A3	O60309	1634 aa		27.56	■■■□□ 2
RAP1B-222	ENST00000540781	DISP2	A7MBM2	1401 aa		27.54	■■■□□ 2
RAP1B-222	ENST00000540781	LTV1	Q96GA3	475 aa	Predicted RBP	27.54	■■■□□ 2
RAP1B-222	ENST00000540781	HOXC9	P31274	260 aa		27.53	■■■□□ 2
RAP1B-222	ENST00000540781	EN1	Q05925	392 aa	Predicted RBP	27.53	■■■□□ 2
RAP1B-222	ENST00000540781	C11orf95	C9JLR9	678 aa	Predicted RBP	27.52	■■■□□ 2
RAP1B-222	ENST00000540781	RRS1	Q15050	365 aa	Known RBP	27.52	■■■□□ 2
RAP1B-222	ENST00000540781	TNS1	Q9HBL0	1735 aa	Known RBP	27.52	■■■□□ 2
RAP1B-222	ENST00000540781	OVOS2	A0A0G2JMS6	1433 aa		27.51	■■□□□ 1.99
RAP1B-222	ENST00000540781	EXOC5	O00471	708 aa		27.51	■■□□□ 1.99
RAP1B-222	ENST00000540781	CGNL1	Q0VF96	1302 aa		27.49	■■□□□ 1.99
RAP1B-222	ENST00000540781	APBA3	O96018	575 aa		27.49	■■□□□ 1.99
RAP1B-222	ENST00000540781	MARCH10	Q8NA82	808 aa	Predicted RBP	27.49	■■□□□ 1.99
RAP1B-222	ENST00000540781	RTL1	A6NKG5	1358 aa		27.48	■■□□□ 1.99
RAP1B-222	ENST00000540781	IL2RB	P14784	551 aa		27.48	■■□□□ 1.99
RAP1B-222	ENST00000540781	PEAK1	Q9H792	1746 aa		27.47	■■□□□ 1.99
RAP1B-222	ENST00000540781	PANK3	Q9H999	370 aa		27.46	■■□□□ 1.99
RAP1B-222	ENST00000540781	FAM208A	Q9UK61	1670 aa	Known RBP	27.46	■■□□□ 1.99
RAP1B-222	ENST00000540781	EZH2	Q15910	746 aa	Known RBP	27.44	■■□□□ 1.98
RAP1B-222	ENST00000540781	TNS2	Q63HR2	1409 aa		27.43	■■□□□ 1.98
RAP1B-222	ENST00000540781	CAMKK2	Q96RR4	588 aa		27.43	■■□□□ 1.98
RAP1B-222	ENST00000540781	FLT4	P35916	1363 aa		27.4	■■□□□ 1.98
RAP1B-222	ENST00000540781	KIF24	Q5T7B8	1368 aa		27.4	■■□□□ 1.98
RAP1B-222	ENST00000540781	SBF2	Q86WG5	1849 aa		27.4	■■□□□ 1.98
RAP1B-222	ENST00000540781	HSP90AB2P	Q58FF8	381 aa		27.4	■■□□□ 1.98
RAP1B-222	ENST00000540781	BCL9	O00512	1426 aa		27.4	■■□□□ 1.98
RAP1B-222	ENST00000540781	PARD3	Q8TEW0	1356 aa		27.39	■■□□□ 1.98
RAP1B-222	ENST00000540781	EMILIN1	Q9Y6C2	1016 aa		27.39	■■□□□ 1.98
RAP1B-222	ENST00000540781	SMG6	Q86US8	1419 aa	Known RBP	27.39	■■□□□ 1.97
RAP1B-222	ENST00000540781	INSR	P06213	1382 aa		27.38	■■□□□ 1.97
RAP1B-222	ENST00000540781	KIF7	Q2M1P5	1343 aa		27.38	■■□□□ 1.97
RAP1B-222	ENST00000540781	RGPD2	P0DJD1	1756 aa		27.37	■■□□□ 1.97
RAP1B-222	ENST00000540781	BCL11B	Q9C0K0	894 aa	Predicted RBP	27.37	■■□□□ 1.97
RAP1B-222	ENST00000540781	PPM1G	O15355	546 aa	Predicted RBP	27.36	■■□□□ 1.97
RAP1B-222	ENST00000540781	NBPF6	Q5VWK0	638 aa		27.36	■■□□□ 1.97
RAP1B-222	ENST00000540781	NBPF4	Q96M43	638 aa		27.36	■■□□□ 1.97
RAP1B-222	ENST00000540781	PTF1A	Q7RTS3	328 aa		27.35	■■□□□ 1.97
RAP1B-222	ENST00000540781	ANKRD26	Q9UPS8	1709 aa		27.34	■■□□□ 1.97
RAP1B-222	ENST00000540781	PSD	A5PKW4	1024 aa	Predicted RBP	27.33	■■□□□ 1.97
RAP1B-222	ENST00000540781	TNNT2	P45379	298 aa	Predicted RBP	27.33	■■□□□ 1.97
RAP1B-222	ENST00000540781	USHBP1	Q8N6Y0	703 aa		27.33	■■□□□ 1.97
RAP1B-222	ENST00000540781	MAP2	P11137	1827 aa	Known RBP	27.32	■■□□□ 1.96
RAP1B-222	ENST00000540781	DDX54	Q8TDD1	881 aa	Known RBP	27.31	■■□□□ 1.96
RAP1B-222	ENST00000540781	POLK	Q9UBT6	870 aa		27.31	■■□□□ 1.96
RAP1B-222	ENST00000540781	KNSTRN	Q9Y448	316 aa		27.31	■■□□□ 1.96
RAP1B-222	ENST00000540781	NSD2	O96028	1365 aa		27.31	■■□□□ 1.96
RAP1B-222	ENST00000540781	PLSCR1	O15162	318 aa		27.3	■■□□□ 1.96
RAP1B-222	ENST00000540781	ACSBG1	Q96GR2	724 aa		27.29	■■□□□ 1.96
RAP1B-222	ENST00000540781	WASHC2A	Q641Q2	1341 aa		27.29	■■□□□ 1.96
RAP1B-222	ENST00000540781	MEGF6	O75095	1541 aa		27.29	■■□□□ 1.96
RAP1B-222	ENST00000540781	RREB1	Q92766	1687 aa		27.29	■■□□□ 1.96
RAP1B-222	ENST00000540781	KCNQ2	O43526	872 aa		27.28	■■□□□ 1.96
RAP1B-222	ENST00000540781	R3HDM1	Q15032	1099 aa	Known RBP	27.28	■■□□□ 1.96
RAP1B-222	ENST00000540781	ZCRB1	Q8TBF4	217 aa	Known RBP	27.28	■■□□□ 1.96
RAP1B-222	ENST00000540781	RAPGEF4	Q8WZA2	1011 aa		27.28	■■□□□ 1.96
RAP1B-222	ENST00000540781	MORC1	Q86VD1	984 aa		27.27	■■□□□ 1.96

Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms