RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 CABP1Q9NZU7 370 aa10.63□□□□□ -0.71
YBX3-209ENST00000540747 AXIN2Q9Y2T1 843 aa10.63□□□□□ -0.71
YBX3-209ENST00000540747 NFAT5O94916 1531 aa10.63□□□□□ -0.71
YBX3-209ENST00000540747 UTRNP46939 3433 aa10.62□□□□□ -0.71
YBX3-209ENST00000540747 NLRP6P59044 892 aa10.62□□□□□ -0.71
YBX3-209ENST00000540747 ARHGEF25Q86VW2 580 aa10.62□□□□□ -0.71
YBX3-209ENST00000540747 MARCH10Q8NA82 808 aaPredicted RBP10.62□□□□□ -0.71
YBX3-209ENST00000540747 BCL11BQ9C0K0 894 aaPredicted RBP10.62□□□□□ -0.71
YBX3-209ENST00000540747 ABCC6O95255 1503 aa10.62□□□□□ -0.71
YBX3-209ENST00000540747 YY1P25490 414 aa10.61□□□□□ -0.71
YBX3-209ENST00000540747 DDB1Q16531 1140 aa10.61□□□□□ -0.71
YBX3-209ENST00000540747 TRPM1Q7Z4N2 1603 aa10.61□□□□□ -0.71
YBX3-209ENST00000540747 CDCA7Q9BWT1 371 aaPredicted RBP10.6□□□□□ -0.71
YBX3-209ENST00000540747 PDGFDQ9GZP0 370 aaPredicted RBP10.6□□□□□ -0.71
YBX3-209ENST00000540747 TTC21BQ7Z4L5 1316 aa10.59□□□□□ -0.71
YBX3-209ENST00000540747 PTGER2P43116 358 aa10.59□□□□□ -0.71
YBX3-209ENST00000540747 TOM1L2Q6ZVM7 507 aa10.59□□□□□ -0.71
YBX3-209ENST00000540747 CARD10Q9BWT7 1032 aa10.59□□□□□ -0.71
YBX3-209ENST00000540747 USP54Q70EL1 1684 aa10.59□□□□□ -0.71
YBX3-209ENST00000540747 AKAP12Q02952 1782 aa10.59□□□□□ -0.71
YBX3-209ENST00000540747 TNS2Q63HR2 1409 aa10.58□□□□□ -0.72
YBX3-209ENST00000540747 MYOM1P52179 1685 aa10.58□□□□□ -0.72
YBX3-209ENST00000540747 PAPPAQ13219 1627 aa10.58□□□□□ -0.72
YBX3-209ENST00000540747 EVC2Q86UK5 1308 aa10.58□□□□□ -0.72
YBX3-209ENST00000540747 TTC21AQ8NDW8 1320 aa10.58□□□□□ -0.72
YBX3-209ENST00000540747 L3MBTL2Q969R5 705 aa10.57□□□□□ -0.72
YBX3-209ENST00000540747 SGIP1Q9BQI5 828 aa10.57□□□□□ -0.72
YBX3-209ENST00000540747 PPP1R1BQ9UD71 204 aaPredicted RBP10.57□□□□□ -0.72
YBX3-209ENST00000540747 RGPD5Q99666 1765 aa10.57□□□□□ -0.72
YBX3-209ENST00000540747 USP31Q70CQ4 1352 aa10.56□□□□□ -0.72
YBX3-209ENST00000540747 CCDC7Q96M83 1385 aa10.56□□□□□ -0.72
YBX3-209ENST00000540747 TXNRD1Q16881 649 aa10.56□□□□□ -0.72
YBX3-209ENST00000540747 KCNH5Q8NCM2 988 aa10.56□□□□□ -0.72
YBX3-209ENST00000540747 ZNF692Q9BU19 519 aaPredicted RBP10.56□□□□□ -0.72
YBX3-209ENST00000540747 NHSQ6T4R5 1651 aa10.56□□□□□ -0.72
YBX3-209ENST00000540747 MON2Q7Z3U7 1717 aa10.55□□□□□ -0.72
YBX3-209ENST00000540747 CD163L1Q9NR16 1453 aa10.55□□□□□ -0.72
YBX3-209ENST00000540747 SBNO2Q9Y2G9 1366 aa10.55□□□□□ -0.72
YBX3-209ENST00000540747 ZBTB7CA1YPR0 619 aa10.55□□□□□ -0.72
YBX3-209ENST00000540747 ZBTB7AO95365 584 aa10.54□□□□□ -0.72
YBX3-209ENST00000540747 SLC15A2Q16348 729 aa10.54□□□□□ -0.72
YBX3-209ENST00000540747 ERBB3P21860 1342 aa10.54□□□□□ -0.72
YBX3-209ENST00000540747 MAP3K5Q99683 1374 aa10.53□□□□□ -0.72
YBX3-209ENST00000540747 KTN1Q86UP2 1357 aaKnown RBP10.52□□□□□ -0.72
YBX3-209ENST00000540747 EXOC5O00471 708 aa10.52□□□□□ -0.73
YBX3-209ENST00000540747 MTFR1LQ9H019 292 aa10.52□□□□□ -0.73
YBX3-209ENST00000540747 STK32BQ9NY57 414 aa10.52□□□□□ -0.73
YBX3-209ENST00000540747 ROCK2O75116 1388 aaKnown RBP10.52□□□□□ -0.73
YBX3-209ENST00000540747 SYT17Q9BSW7 474 aa10.51□□□□□ -0.73
YBX3-209ENST00000540747 FHDC1Q9C0D6 1143 aaPredicted RBP10.51□□□□□ -0.73
YBX3-209ENST00000540747 ATF5Q9Y2D1 282 aaPredicted RBP10.51□□□□□ -0.73
YBX3-209ENST00000540747 GOLGB1Q14789 3259 aaKnown RBP10.5□□□□□ -0.73
YBX3-209ENST00000540747 SOX12O15370 315 aa10.5□□□□□ -0.73
YBX3-209ENST00000540747 CSB-PGBD3P0DP91 1061 aa10.5□□□□□ -0.73
YBX3-209ENST00000540747 ZNF784Q8NCA9 323 aaPredicted RBP10.5□□□□□ -0.73
YBX3-209ENST00000540747 COL24A1Q17RW2 1714 aa10.5□□□□□ -0.73
YBX3-209ENST00000540747 BTAF1O14981 1849 aa10.49□□□□□ -0.73
YBX3-209ENST00000540747 DCAF8L1A6NGE4 600 aa10.49□□□□□ -0.73
YBX3-209ENST00000540747 ZNF827Q17R98 1081 aa10.49□□□□□ -0.73
YBX3-209ENST00000540747 NME9Q86XW9 330 aa10.49□□□□□ -0.73
YBX3-209ENST00000540747 SIN3AQ96ST3 1273 aa10.49□□□□□ -0.73
YBX3-209ENST00000540747 LRRC4BQ9NT99 713 aa10.49□□□□□ -0.73
YBX3-209ENST00000540747 LTN1O94822 1766 aa10.48□□□□□ -0.73
YBX3-209ENST00000540747 IL2RBP14784 551 aa10.48□□□□□ -0.73
YBX3-209ENST00000540747 EDC4Q6P2E9 1401 aaKnown RBP10.48□□□□□ -0.73
YBX3-209ENST00000540747 QSER1Q2KHR3 1735 aa10.47□□□□□ -0.73
YBX3-209ENST00000540747 ANKRD24Q8TF21 1146 aa10.47□□□□□ -0.73
YBX3-209ENST00000540747 AKT1S1Q96B36 256 aa10.47□□□□□ -0.73
YBX3-209ENST00000540747 ACSBG1Q96GR2 724 aa10.47□□□□□ -0.73
YBX3-209ENST00000540747 NLRP2Q9NX02 1062 aa10.47□□□□□ -0.73
YBX3-209ENST00000540747 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.46□□□□□ -0.73
YBX3-209ENST00000540747 ARXQ96QS3 562 aa10.46□□□□□ -0.73
YBX3-209ENST00000540747 A0A1W2PP64 1363 aa10.46□□□□□ -0.74
YBX3-209ENST00000540747 NSD2O96028 1365 aa10.46□□□□□ -0.74
YBX3-209ENST00000540747 CEP350Q5VT06 3117 aa10.45□□□□□ -0.74
YBX3-209ENST00000540747 CHD4Q14839 1912 aa10.45□□□□□ -0.74
YBX3-209ENST00000540747 FAM208AQ9UK61 1670 aaKnown RBP10.45□□□□□ -0.74
YBX3-209ENST00000540747 PUS7Q96PZ0 661 aaKnown RBP10.45□□□□□ -0.74
YBX3-209ENST00000540747 PNPLA7Q6ZV29 1317 aa10.44□□□□□ -0.74
YBX3-209ENST00000540747 IP6K1Q92551 441 aa10.44□□□□□ -0.74
YBX3-209ENST00000540747 SLC12A5Q9H2X9 1139 aa10.44□□□□□ -0.74
YBX3-209ENST00000540747 TUBGCP6Q96RT7 1819 aa10.43□□□□□ -0.74
YBX3-209ENST00000540747 SLC27A3Q5K4L6 730 aa10.43□□□□□ -0.74
YBX3-209ENST00000540747 SLC16A10Q8TF71 515 aa10.43□□□□□ -0.74
YBX3-209ENST00000540747 SHANK3Q9BYB0 1731 aa10.43□□□□□ -0.74
YBX3-209ENST00000540747 ANKRD36BQ8N2N9 1353 aa10.42□□□□□ -0.74
YBX3-209ENST00000540747 LY75O60449 1722 aa10.42□□□□□ -0.74
YBX3-209ENST00000540747 HDGFL2Q7Z4V5 671 aaPredicted RBP10.42□□□□□ -0.74
YBX3-209ENST00000540747 MEGF6O75095 1541 aa10.42□□□□□ -0.74
YBX3-209ENST00000540747 NEUROD1Q13562 356 aa10.41□□□□□ -0.74
YBX3-209ENST00000540747 TESK2Q96S53 571 aa10.41□□□□□ -0.74
YBX3-209ENST00000540747 CARD11Q9BXL7 1154 aa10.41□□□□□ -0.74
YBX3-209ENST00000540747 MAP3K19Q56UN5 1328 aa10.4□□□□□ -0.74
YBX3-209ENST00000540747 C1QTNF8P60827 252 aa10.4□□□□□ -0.74
YBX3-209ENST00000540747 TERF2IPQ9NYB0 399 aa10.4□□□□□ -0.74
YBX3-209ENST00000540747 DOT1LQ8TEK3 1739 aa10.4□□□□□ -0.74
YBX3-209ENST00000540747 HOXC9P31274 260 aa10.39□□□□□ -0.75
YBX3-209ENST00000540747 TMC1Q8TDI8 760 aa10.39□□□□□ -0.75
YBX3-209ENST00000540747 RTL1A6NKG5 1358 aa10.39□□□□□ -0.75
YBX3-209ENST00000540747 PRIM1P49642 420 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms