RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 PER1O15534 1290 aaPredicted RBP14.49□□□□□ -0.09
ATL3-204ENST00000540699 RGPD5Q99666 1765 aa14.49□□□□□ -0.09
ATL3-204ENST00000540699 BLMP54132 1417 aaPredicted RBP14.49□□□□□ -0.09
ATL3-204ENST00000540699 ANP32CO43423 234 aa14.48□□□□□ -0.09
ATL3-204ENST00000540699 COG3Q96JB2 828 aa14.48□□□□□ -0.09
ATL3-204ENST00000540699 CAMTA1Q9Y6Y1 1673 aa14.47□□□□□ -0.09
ATL3-204ENST00000540699 ARHGEF25Q86VW2 580 aa14.47□□□□□ -0.09
ATL3-204ENST00000540699 MAP2P11137 1827 aaKnown RBP14.47□□□□□ -0.09
ATL3-204ENST00000540699 AATKQ6ZMQ8 1374 aa14.47□□□□□ -0.09
ATL3-204ENST00000540699 ZC3H6P61129 1189 aaKnown RBP14.46□□□□□ -0.09
ATL3-204ENST00000540699 AMER1Q5JTC6 1135 aaPredicted RBP14.46□□□□□ -0.09
ATL3-204ENST00000540699 SEPT12Q8IYM1 358 aa14.46□□□□□ -0.09
ATL3-204ENST00000540699 GGNBP2Q9H3C7 697 aa14.46□□□□□ -0.09
ATL3-204ENST00000540699 PRDM11Q9NQV5 511 aa14.46□□□□□ -0.09
ATL3-204ENST00000540699 NPC1L1Q9UHC9 1359 aa14.46□□□□□ -0.1
ATL3-204ENST00000540699 ONECUT3O60422 494 aaPredicted RBP14.45□□□□□ -0.1
ATL3-204ENST00000540699 CCDC9Q9Y3X0 531 aaKnown RBP14.44□□□□□ -0.1
ATL3-204ENST00000540699 KNSTRNQ9Y448 316 aa14.44□□□□□ -0.1
ATL3-204ENST00000540699 THSD7AQ9UPZ6 1657 aa14.43□□□□□ -0.1
ATL3-204ENST00000540699 CCER2I3L3R5 266 aa14.43□□□□□ -0.1
ATL3-204ENST00000540699 CHRNA2Q15822 529 aa14.43□□□□□ -0.1
ATL3-204ENST00000540699 PRKRIP1Q9H875 184 aaPredicted RBP14.43□□□□□ -0.1
ATL3-204ENST00000540699 PEAK1Q9H792 1746 aa14.43□□□□□ -0.1
ATL3-204ENST00000540699 COL5A2P05997 1499 aaPredicted RBP14.43□□□□□ -0.1
ATL3-204ENST00000540699 KRT27Q7Z3Y8 459 aa14.42□□□□□ -0.1
ATL3-204ENST00000540699 BTG4Q9NY30 223 aa14.42□□□□□ -0.1
ATL3-204ENST00000540699 FAM208AQ9UK61 1670 aaKnown RBP14.42□□□□□ -0.1
ATL3-204ENST00000540699 RGPD1P0DJD0 1748 aa14.41□□□□□ -0.1
ATL3-204ENST00000540699 SF3B2Q13435 895 aaKnown RBP14.41□□□□□ -0.1
ATL3-204ENST00000540699 RTL1A6NKG5 1358 aa14.41□□□□□ -0.1
ATL3-204ENST00000540699 KIF24Q5T7B8 1368 aa14.41□□□□□ -0.1
ATL3-204ENST00000540699 MAP3K19Q56UN5 1328 aa14.41□□□□□ -0.1
ATL3-204ENST00000540699 SOX12O15370 315 aa14.4□□□□□ -0.1
ATL3-204ENST00000540699 DEFB132Q7Z7B7 95 aa14.4□□□□□ -0.1
ATL3-204ENST00000540699 SMG6Q86US8 1419 aaKnown RBP14.4□□□□□ -0.1
ATL3-204ENST00000540699 TNS1Q9HBL0 1735 aaKnown RBP14.39□□□□□ -0.11
ATL3-204ENST00000540699 FAM98CQ17RN3 349 aaKnown RBP14.39□□□□□ -0.11
ATL3-204ENST00000540699 AXIN2Q9Y2T1 843 aa14.39□□□□□ -0.11
ATL3-204ENST00000540699 SPATA31A5Q5VU36 1347 aa14.39□□□□□ -0.11
ATL3-204ENST00000540699 SPATA31A7Q8IWB4 1347 aa14.39□□□□□ -0.11
ATL3-204ENST00000540699 WNK3Q9BYP7 1800 aa14.38□□□□□ -0.11
ATL3-204ENST00000540699 A0A0G2JS52 829 aa14.38□□□□□ -0.11
ATL3-204ENST00000540699 FBLN1P23142 703 aa14.38□□□□□ -0.11
ATL3-204ENST00000540699 MYT1Q01538 1121 aa14.38□□□□□ -0.11
ATL3-204ENST00000540699 IP6K1Q92551 441 aa14.38□□□□□ -0.11
ATL3-204ENST00000540699 PARD3Q8TEW0 1356 aa14.36□□□□□ -0.11
ATL3-204ENST00000540699 HOXC9P31274 260 aa14.36□□□□□ -0.11
ATL3-204ENST00000540699 MORC1Q86VD1 984 aa14.36□□□□□ -0.11
ATL3-204ENST00000540699 RGPD2P0DJD1 1756 aa14.36□□□□□ -0.11
ATL3-204ENST00000540699 LRP5O75197 1615 aa14.36□□□□□ -0.11
ATL3-204ENST00000540699 WDR17Q8IZU2 1322 aa14.36□□□□□ -0.11
ATL3-204ENST00000540699 FLT4P35916 1363 aa14.35□□□□□ -0.11
ATL3-204ENST00000540699 CRB1P82279 1406 aa14.35□□□□□ -0.11
ATL3-204ENST00000540699 ZBTB7CA1YPR0 619 aa14.35□□□□□ -0.11
ATL3-204ENST00000540699 RRS1Q15050 365 aaKnown RBP14.35□□□□□ -0.11
ATL3-204ENST00000540699 POLKQ9UBT6 870 aa14.35□□□□□ -0.11
ATL3-204ENST00000540699 ERBB3P21860 1342 aa14.35□□□□□ -0.11
ATL3-204ENST00000540699 SPATA31A1Q5TZJ5 1347 aa14.35□□□□□ -0.11
ATL3-204ENST00000540699 INSRP06213 1382 aa14.34□□□□□ -0.11
ATL3-204ENST00000540699 LARP1Q6PKG0 1096 aaKnown RBP14.34□□□□□ -0.11
ATL3-204ENST00000540699 AMPHP49418 695 aa14.33□□□□□ -0.12
ATL3-204ENST00000540699 EVA1CP58658 441 aa14.33□□□□□ -0.12
ATL3-204ENST00000540699 RALBP1Q15311 655 aa14.33□□□□□ -0.12
ATL3-204ENST00000540699 CC2D1BQ5T0F9 858 aaKnown RBP14.33□□□□□ -0.12
ATL3-204ENST00000540699 STRN4Q9NRL3 753 aa14.33□□□□□ -0.12
ATL3-204ENST00000540699 EMILIN1Q9Y6C2 1016 aa14.33□□□□□ -0.12
ATL3-204ENST00000540699 PARP4Q9UKK3 1724 aaKnown RBP14.32□□□□□ -0.12
ATL3-204ENST00000540699 BAG6P46379 1132 aa14.32□□□□□ -0.12
ATL3-204ENST00000540699 ANKRD24Q8TF21 1146 aa14.32□□□□□ -0.12
ATL3-204ENST00000540699 DISP2A7MBM2 1401 aa14.32□□□□□ -0.12
ATL3-204ENST00000540699 FAM182BQ5T319 152 aa14.31□□□□□ -0.12
ATL3-204ENST00000540699 CARD10Q9BWT7 1032 aa14.31□□□□□ -0.12
ATL3-204ENST00000540699 THRAP3Q9Y2W1 955 aaKnown RBP14.31□□□□□ -0.12
ATL3-204ENST00000540699 TNNT2P45379 298 aaPredicted RBP14.3□□□□□ -0.12
ATL3-204ENST00000540699 CCDC184Q52MB2 194 aa14.3□□□□□ -0.12
ATL3-204ENST00000540699 HSP90AB2PQ58FF8 381 aa14.3□□□□□ -0.12
ATL3-204ENST00000540699 BARGINQ6ZT62 677 aa14.3□□□□□ -0.12
ATL3-204ENST00000540699 MYBBP1AQ9BQG0 1328 aaKnown RBP14.3□□□□□ -0.12
ATL3-204ENST00000540699 NCAPD2Q15021 1401 aa14.3□□□□□ -0.12
ATL3-204ENST00000540699 TCP11L2Q8N4U5 519 aa14.29□□□□□ -0.12
ATL3-204ENST00000540699 PSDA5PKW4 1024 aaPredicted RBP14.28□□□□□ -0.12
ATL3-204ENST00000540699 TOM1L2Q6ZVM7 507 aa14.28□□□□□ -0.12
ATL3-204ENST00000540699 RREB1Q92766 1687 aa14.28□□□□□ -0.12
ATL3-204ENST00000540699 LRRC37A3O60309 1634 aa14.27□□□□□ -0.12
ATL3-204ENST00000540699 COL3A1P02461 1466 aaPredicted RBP14.27□□□□□ -0.12
ATL3-204ENST00000540699 CSB-PGBD3P0DP91 1061 aa14.27□□□□□ -0.13
ATL3-204ENST00000540699 EN1Q05925 392 aaPredicted RBP14.27□□□□□ -0.13
ATL3-204ENST00000540699 MTHFSP49914 203 aa14.26□□□□□ -0.13
ATL3-204ENST00000540699 NUP188Q5SRE5 1749 aa14.25□□□□□ -0.13
ATL3-204ENST00000540699 PPM1GO15355 546 aaPredicted RBP14.25□□□□□ -0.13
ATL3-204ENST00000540699 PPP2R1AP30153 589 aa14.25□□□□□ -0.13
ATL3-204ENST00000540699 CNGB1Q14028 1251 aaPredicted RBP14.25□□□□□ -0.13
ATL3-204ENST00000540699 LTV1Q96GA3 475 aaPredicted RBP14.25□□□□□ -0.13
ATL3-204ENST00000540699 EIF4A2Q14240 407 aaKnown RBP14.24□□□□□ -0.13
ATL3-204ENST00000540699 NBPF6Q5VWK0 638 aa14.24□□□□□ -0.13
ATL3-204ENST00000540699 FAM196AQ6ZSG2 479 aa14.24□□□□□ -0.13
ATL3-204ENST00000540699 NBPF4Q96M43 638 aa14.24□□□□□ -0.13
ATL3-204ENST00000540699 CDCA7Q9BWT1 371 aaPredicted RBP14.24□□□□□ -0.13
ATL3-204ENST00000540699 MRS2Q9HD23 443 aa14.24□□□□□ -0.13
ATL3-204ENST00000540699 NLRP2Q9NX02 1062 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms