RNA–Protein interactions for RNA: ENST00000540440.1

PMFBP1-210, Transcript of polyamine modulated factor 1 binding protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene PMFBP1, Length 407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1-210ENST00000540440 FOXC1Q12948 553 aa10.3□□□□□ -0.76
PMFBP1-210ENST00000540440 MAFBQ9Y5Q3 323 aaPredicted RBP10.3□□□□□ -0.76
PMFBP1-210ENST00000540440 USP17L5A8MUK1 530 aa10.29□□□□□ -0.76
PMFBP1-210ENST00000540440 DEPDC4Q8N2C3 294 aa10.29□□□□□ -0.76
PMFBP1-210ENST00000540440 MRGPRX2Q96LB1 330 aa10.29□□□□□ -0.76
PMFBP1-210ENST00000540440 ARXQ96QS3 562 aa10.29□□□□□ -0.76
PMFBP1-210ENST00000540440 KCTD15Q96SI1 283 aaPredicted RBP10.29□□□□□ -0.76
PMFBP1-210ENST00000540440 CDV3Q9UKY7 258 aaKnown RBP10.29□□□□□ -0.76
PMFBP1-210ENST00000540440 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.28□□□□□ -0.76
PMFBP1-210ENST00000540440 WNT7AO00755 349 aa10.28□□□□□ -0.76
PMFBP1-210ENST00000540440 HOMEZQ8IX15 550 aa10.28□□□□□ -0.76
PMFBP1-210ENST00000540440 PLPP7Q8NBV4 271 aa10.28□□□□□ -0.76
PMFBP1-210ENST00000540440 NFATC2IPQ8NCF5 419 aa10.28□□□□□ -0.76
PMFBP1-210ENST00000540440 USP17L3A6NCW0 530 aa10.27□□□□□ -0.77
PMFBP1-210ENST00000540440 USP17L4A6NCW7 530 aa10.27□□□□□ -0.77
PMFBP1-210ENST00000540440 FSHRP23945 695 aa10.27□□□□□ -0.77
PMFBP1-210ENST00000540440 USP17L2Q6R6M4 530 aa10.27□□□□□ -0.77
PMFBP1-210ENST00000540440 USP17L1Q7RTZ2 530 aa10.27□□□□□ -0.77
PMFBP1-210ENST00000540440 ZNF598Q86UK7 904 aaKnown RBP10.27□□□□□ -0.77
PMFBP1-210ENST00000540440 DOLKQ9UPQ8 538 aa10.27□□□□□ -0.77
PMFBP1-210ENST00000540440 CDCA8Q53HL2 280 aa10.26□□□□□ -0.77
PMFBP1-210ENST00000540440 RNF20Q5VTR2 975 aa10.26□□□□□ -0.77
PMFBP1-210ENST00000540440 PHTF2Q8N3S3 785 aa10.26□□□□□ -0.77
PMFBP1-210ENST00000540440 MAP4K5Q9Y4K4 846 aa10.26□□□□□ -0.77
PMFBP1-210ENST00000540440 V9GY48 417 aaPredicted RBP10.26□□□□□ -0.77
PMFBP1-210ENST00000540440 TSGA10IPQ3SY00 556 aa10.25□□□□□ -0.77
PMFBP1-210ENST00000540440 OXLD1Q5BKU9 147 aa10.25□□□□□ -0.77
PMFBP1-210ENST00000540440 PBXIP1Q96AQ6 731 aa10.25□□□□□ -0.77
PMFBP1-210ENST00000540440 CCDC85AQ96PX6 553 aaPredicted RBP10.25□□□□□ -0.77
PMFBP1-210ENST00000540440 PCDHB11Q9Y5F2 797 aa10.25□□□□□ -0.77
PMFBP1-210ENST00000540440 ESPNB1AK53 854 aa10.24□□□□□ -0.77
PMFBP1-210ENST00000540440 NCOA4Q13772 614 aa10.24□□□□□ -0.77
PMFBP1-210ENST00000540440 INTS6LQ5JSJ4 861 aaKnown RBP10.24□□□□□ -0.77
PMFBP1-210ENST00000540440 SIAH2O43255 324 aa10.23□□□□□ -0.77
PMFBP1-210ENST00000540440 TNFRSF10AO00220 468 aa10.22□□□□□ -0.77
PMFBP1-210ENST00000540440 ADH1CP00326 375 aa10.22□□□□□ -0.77
PMFBP1-210ENST00000540440 ALDH1A1P00352 501 aa10.22□□□□□ -0.77
PMFBP1-210ENST00000540440 MAP7D1Q3KQU3 841 aa10.22□□□□□ -0.77
PMFBP1-210ENST00000540440 PLEKHM2Q8IWE5 1019 aa10.22□□□□□ -0.77
PMFBP1-210ENST00000540440 SEPT12Q8IYM1 358 aa10.22□□□□□ -0.77
PMFBP1-210ENST00000540440 CDK15Q96Q40 435 aa10.22□□□□□ -0.77
PMFBP1-210ENST00000540440 PKD2L1Q9P0L9 805 aa10.22□□□□□ -0.77
PMFBP1-210ENST00000540440 PPP1R15AO75807 674 aaPredicted RBP10.21□□□□□ -0.77
PMFBP1-210ENST00000540440 EML3Q32P44 896 aa10.21□□□□□ -0.77
PMFBP1-210ENST00000540440 CDCA7Q9BWT1 371 aaPredicted RBP10.21□□□□□ -0.77
PMFBP1-210ENST00000540440 GRM5P41594 1212 aa10.2□□□□□ -0.78
PMFBP1-210ENST00000540440 TRAF7Q6Q0C0 670 aa10.2□□□□□ -0.78
PMFBP1-210ENST00000540440 VRTNQ9H8Y1 702 aa10.2□□□□□ -0.78
PMFBP1-210ENST00000540440 TTC24A2A3L6 582 aaPredicted RBP10.19□□□□□ -0.78
PMFBP1-210ENST00000540440 ERVH48-1M5A8F1 160 aa10.19□□□□□ -0.78
PMFBP1-210ENST00000540440 MKRN1Q9UHC7 482 aaKnown RBP10.19□□□□□ -0.78
PMFBP1-210ENST00000540440 CHIC2Q9UKJ5 165 aa10.19□□□□□ -0.78
PMFBP1-210ENST00000540440 WASF2Q9Y6W5 498 aa10.19□□□□□ -0.78
PMFBP1-210ENST00000540440 ACIN1Q9UKV3 1341 aaKnown RBP10.18□□□□□ -0.78
PMFBP1-210ENST00000540440 CYP4X1Q8N118 509 aa10.18□□□□□ -0.78
PMFBP1-210ENST00000540440 MPNDQ8N594 471 aa10.18□□□□□ -0.78
PMFBP1-210ENST00000540440 NR3C2P08235 984 aa10.17□□□□□ -0.78
PMFBP1-210ENST00000540440 DHX9Q08211 1270 aaKnown RBP10.17□□□□□ -0.78
PMFBP1-210ENST00000540440 NR5A1Q13285 461 aa10.17□□□□□ -0.78
PMFBP1-210ENST00000540440 KANK4Q5T7N3 995 aaPredicted RBP10.17□□□□□ -0.78
PMFBP1-210ENST00000540440 CCDC116Q8IYX3 515 aa10.17□□□□□ -0.78
PMFBP1-210ENST00000540440 SNIP1Q8TAD8 396 aaKnown RBP10.17□□□□□ -0.78
PMFBP1-210ENST00000540440 TMPRSS4Q9NRS4 437 aa10.17□□□□□ -0.78
PMFBP1-210ENST00000540440 NOD1Q9Y239 953 aa10.17□□□□□ -0.78
PMFBP1-210ENST00000540440 LZTS3O60299 673 aaPredicted RBP10.16□□□□□ -0.78
PMFBP1-210ENST00000540440 GDF9O60383 454 aa10.16□□□□□ -0.78
PMFBP1-210ENST00000540440 RASA1P20936 1047 aa10.16□□□□□ -0.78
PMFBP1-210ENST00000540440 SRPK2P78362 688 aaKnown RBP10.16□□□□□ -0.78
PMFBP1-210ENST00000540440 NNTQ13423 1086 aa10.16□□□□□ -0.78
PMFBP1-210ENST00000540440 CCDC125Q86Z20 511 aa10.16□□□□□ -0.78
PMFBP1-210ENST00000540440 RETREG2Q8NC44 543 aa10.16□□□□□ -0.78
PMFBP1-210ENST00000540440 ESF1Q9H501 851 aaKnown RBP10.16□□□□□ -0.78
PMFBP1-210ENST00000540440 CYLDQ9NQC7 956 aa10.16□□□□□ -0.78
PMFBP1-210ENST00000540440 J3QL48 77 aa10.15□□□□□ -0.78
PMFBP1-210ENST00000540440 MYCP01106 439 aaPredicted RBP10.15□□□□□ -0.78
PMFBP1-210ENST00000540440 SCTRP47872 440 aa10.15□□□□□ -0.78
PMFBP1-210ENST00000540440 PPP1R26Q5T8A7 1209 aaPredicted RBP10.15□□□□□ -0.78
PMFBP1-210ENST00000540440 ATP5J2-PTCD1G3V325 749 aa10.14□□□□□ -0.79
PMFBP1-210ENST00000540440 PSME1Q06323 249 aa10.14□□□□□ -0.79
PMFBP1-210ENST00000540440 LARP1Q6PKG0 1096 aaKnown RBP10.14□□□□□ -0.79
PMFBP1-210ENST00000540440 TRIM50Q86XT4 487 aa10.14□□□□□ -0.79
PMFBP1-210ENST00000540440 ZNF594Q96JF6 807 aaPredicted RBP10.14□□□□□ -0.79
PMFBP1-210ENST00000540440 CSB-PGBD3P0DP91 1061 aa10.13□□□□□ -0.79
PMFBP1-210ENST00000540440 GTF2IP78347 998 aa10.13□□□□□ -0.79
PMFBP1-210ENST00000540440 USP4Q13107 963 aa10.13□□□□□ -0.79
PMFBP1-210ENST00000540440 CRTC2Q53ET0 693 aaPredicted RBP10.13□□□□□ -0.79
PMFBP1-210ENST00000540440 TRIM67Q6ZTA4 783 aa10.13□□□□□ -0.79
PMFBP1-210ENST00000540440 OGFOD1Q8N543 542 aa10.13□□□□□ -0.79
PMFBP1-210ENST00000540440 ZNF784Q8NCA9 323 aaPredicted RBP10.13□□□□□ -0.79
PMFBP1-210ENST00000540440 SIRT1Q96EB6 747 aa10.13□□□□□ -0.79
PMFBP1-210ENST00000540440 USP17L15C9J2P7 530 aa10.12□□□□□ -0.79
PMFBP1-210ENST00000540440 USP17L10C9JJH3 530 aa10.12□□□□□ -0.79
PMFBP1-210ENST00000540440 USP17L13C9JLJ4 530 aa10.12□□□□□ -0.79
PMFBP1-210ENST00000540440 USP17L12C9JPN9 530 aa10.12□□□□□ -0.79
PMFBP1-210ENST00000540440 USP17L11C9JVI0 530 aa10.12□□□□□ -0.79
PMFBP1-210ENST00000540440 USP17L21D6R901 530 aa10.12□□□□□ -0.79
PMFBP1-210ENST00000540440 USP17L18D6R9N7 530 aa10.12□□□□□ -0.79
PMFBP1-210ENST00000540440 USP17L22D6RA61 530 aa10.12□□□□□ -0.79
PMFBP1-210ENST00000540440 USP17L17D6RBQ6 530 aa10.12□□□□□ -0.79
PMFBP1-210ENST00000540440 USP17L19D6RCP7 530 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms