RNA–Protein interactions for RNA: ENST00000540009.1

ZNF664-208, Transcript of zinc finger protein 664, human

TSL 3

Gene ZNF664, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF664-208	ENST00000540009	USP35	Q9P2H5	1018 aa		31.52	■■■□□ 2.64
ZNF664-208	ENST00000540009	BRWD3	Q6RI45	1802 aa		31.51	■■■□□ 2.63
ZNF664-208	ENST00000540009	COG3	Q96JB2	828 aa		31.5	■■■□□ 2.63
ZNF664-208	ENST00000540009	CARD14	Q9BXL6	1004 aa		31.49	■■■□□ 2.63
ZNF664-208	ENST00000540009	C11orf95	C9JLR9	678 aa	Predicted RBP	31.48	■■■□□ 2.63
ZNF664-208	ENST00000540009	FYB1	O15117	783 aa		31.48	■■■□□ 2.63
ZNF664-208	ENST00000540009	GGNBP2	Q9H3C7	697 aa		31.47	■■■□□ 2.63
ZNF664-208	ENST00000540009	RGPD5	Q99666	1765 aa		31.45	■■■□□ 2.63
ZNF664-208	ENST00000540009	NSD3	Q9BZ95	1437 aa		31.45	■■■□□ 2.63
ZNF664-208	ENST00000540009	CRB1	P82279	1406 aa		31.44	■■■□□ 2.62
ZNF664-208	ENST00000540009	LTN1	O94822	1766 aa		31.44	■■■□□ 2.62
ZNF664-208	ENST00000540009	KRT27	Q7Z3Y8	459 aa		31.44	■■■□□ 2.62
ZNF664-208	ENST00000540009	TCP11L2	Q8N4U5	519 aa		31.44	■■■□□ 2.62
ZNF664-208	ENST00000540009	THSD7A	Q9UPZ6	1657 aa		31.44	■■■□□ 2.62
ZNF664-208	ENST00000540009	BARGIN	Q6ZT62	677 aa		31.42	■■■□□ 2.62
ZNF664-208	ENST00000540009	TOM1L2	Q6ZVM7	507 aa		31.42	■■■□□ 2.62
ZNF664-208	ENST00000540009	ABCC6	O95255	1503 aa		31.42	■■■□□ 2.62
ZNF664-208	ENST00000540009	WDR17	Q8IZU2	1322 aa		31.42	■■■□□ 2.62
ZNF664-208	ENST00000540009	EP400	Q96L91	3159 aa		31.42	■■■□□ 2.62
ZNF664-208	ENST00000540009	KIF20B	Q96Q89	1820 aa		31.41	■■■□□ 2.62
ZNF664-208	ENST00000540009	CSB-PGBD3	P0DP91	1061 aa		31.4	■■■□□ 2.62
ZNF664-208	ENST00000540009	FBLN1	P23142	703 aa		31.4	■■■□□ 2.62
ZNF664-208	ENST00000540009	THRAP3	Q9Y2W1	955 aa	Known RBP	31.4	■■■□□ 2.62
ZNF664-208	ENST00000540009	PANK3	Q9H999	370 aa		31.36	■■■□□ 2.61
ZNF664-208	ENST00000540009	KIF7	Q2M1P5	1343 aa		31.34	■■■□□ 2.61
ZNF664-208	ENST00000540009	MAP3K19	Q56UN5	1328 aa		31.34	■■■□□ 2.61
ZNF664-208	ENST00000540009	IP6K1	Q92551	441 aa		31.33	■■■□□ 2.61
ZNF664-208	ENST00000540009	ERBB3	P21860	1342 aa		31.32	■■■□□ 2.6
ZNF664-208	ENST00000540009	CGNL1	Q0VF96	1302 aa		31.32	■■■□□ 2.6
ZNF664-208	ENST00000540009	FAM182B	Q5T319	152 aa		31.32	■■■□□ 2.6
ZNF664-208	ENST00000540009	RRS1	Q15050	365 aa	Known RBP	31.31	■■■□□ 2.6
ZNF664-208	ENST00000540009	ANKRD24	Q8TF21	1146 aa		31.31	■■■□□ 2.6
ZNF664-208	ENST00000540009	CARD10	Q9BWT7	1032 aa		31.31	■■■□□ 2.6
ZNF664-208	ENST00000540009	AMPH	P49418	695 aa		31.3	■■■□□ 2.6
ZNF664-208	ENST00000540009	BLM	P54132	1417 aa	Predicted RBP	31.3	■■■□□ 2.6
ZNF664-208	ENST00000540009	HOXC9	P31274	260 aa		31.28	■■■□□ 2.6
ZNF664-208	ENST00000540009	CCDC125	Q86Z20	511 aa		31.28	■■■□□ 2.6
ZNF664-208	ENST00000540009	PDE3B	Q13370	1112 aa		31.27	■■■□□ 2.6
ZNF664-208	ENST00000540009	NLRP2	Q9NX02	1062 aa		31.27	■■■□□ 2.6
ZNF664-208	ENST00000540009	PARP4	Q9UKK3	1724 aa	Known RBP	31.27	■■■□□ 2.6
ZNF664-208	ENST00000540009	LTV1	Q96GA3	475 aa	Predicted RBP	31.26	■■■□□ 2.59
ZNF664-208	ENST00000540009	CCDC7	Q96M83	1385 aa		31.25	■■■□□ 2.59
ZNF664-208	ENST00000540009	WNK3	Q9BYP7	1800 aa		31.24	■■■□□ 2.59
ZNF664-208	ENST00000540009	RTL1	A6NKG5	1358 aa		31.23	■■■□□ 2.59
ZNF664-208	ENST00000540009	CDCA7	Q9BWT1	371 aa	Predicted RBP	31.22	■■■□□ 2.59
ZNF664-208	ENST00000540009	DDB1	Q16531	1140 aa		31.21	■■■□□ 2.59
ZNF664-208	ENST00000540009	LRRC37A3	O60309	1634 aa		31.2	■■■□□ 2.59
ZNF664-208	ENST00000540009	DISP2	A7MBM2	1401 aa		31.2	■■■□□ 2.59
ZNF664-208	ENST00000540009	SF3B2	Q13435	895 aa	Known RBP	31.18	■■■□□ 2.58
ZNF664-208	ENST00000540009	FAM196A	Q6ZSG2	479 aa		31.18	■■■□□ 2.58
ZNF664-208	ENST00000540009	EMILIN1	Q9Y6C2	1016 aa		31.18	■■■□□ 2.58
ZNF664-208	ENST00000540009	WASHC2A	Q641Q2	1341 aa		31.18	■■■□□ 2.58
ZNF664-208	ENST00000540009	PEAK1	Q9H792	1746 aa		31.18	■■■□□ 2.58
ZNF664-208	ENST00000540009	ANKRD26	Q9UPS8	1709 aa		31.18	■■■□□ 2.58
ZNF664-208	ENST00000540009	KNSTRN	Q9Y448	316 aa		31.17	■■■□□ 2.58
ZNF664-208	ENST00000540009	HSP90AB2P	Q58FF8	381 aa		31.16	■■■□□ 2.58
ZNF664-208	ENST00000540009	FLT4	P35916	1363 aa		31.16	■■■□□ 2.58
ZNF664-208	ENST00000540009	FAM208A	Q9UK61	1670 aa	Known RBP	31.16	■■■□□ 2.58
ZNF664-208	ENST00000540009	TNNT2	P45379	298 aa	Predicted RBP	31.15	■■■□□ 2.58
ZNF664-208	ENST00000540009	KIF24	Q5T7B8	1368 aa		31.15	■■■□□ 2.58
ZNF664-208	ENST00000540009	NSD2	O96028	1365 aa		31.14	■■■□□ 2.58
ZNF664-208	ENST00000540009	PPM1G	O15355	546 aa	Predicted RBP	31.13	■■■□□ 2.57
ZNF664-208	ENST00000540009	IL2RB	P14784	551 aa		31.13	■■■□□ 2.57
ZNF664-208	ENST00000540009	DEFB132	Q7Z7B7	95 aa		31.13	■■■□□ 2.57
ZNF664-208	ENST00000540009	EXOC5	O00471	708 aa		31.12	■■■□□ 2.57
ZNF664-208	ENST00000540009	INSR	P06213	1382 aa		31.12	■■■□□ 2.57
ZNF664-208	ENST00000540009	TRIM37	O94972	964 aa		31.11	■■■□□ 2.57
ZNF664-208	ENST00000540009	MAP2	P11137	1827 aa	Known RBP	31.1	■■■□□ 2.57
ZNF664-208	ENST00000540009	RGPD2	P0DJD1	1756 aa		31.1	■■■□□ 2.57
ZNF664-208	ENST00000540009	RGPD1	P0DJD0	1748 aa		31.1	■■■□□ 2.57
ZNF664-208	ENST00000540009	SMG6	Q86US8	1419 aa	Known RBP	31.1	■■■□□ 2.57
ZNF664-208	ENST00000540009	POLK	Q9UBT6	870 aa		31.1	■■■□□ 2.57
ZNF664-208	ENST00000540009	MARCH10	Q8NA82	808 aa	Predicted RBP	31.09	■■■□□ 2.57
ZNF664-208	ENST00000540009	OVOS2	A0A0G2JMS6	1433 aa		31.08	■■■□□ 2.57
ZNF664-208	ENST00000540009	NBPF6	Q5VWK0	638 aa		31.08	■■■□□ 2.57
ZNF664-208	ENST00000540009	MORC1	Q86VD1	984 aa		31.08	■■■□□ 2.57
ZNF664-208	ENST00000540009	NBPF4	Q96M43	638 aa		31.08	■■■□□ 2.57
ZNF664-208	ENST00000540009	TNS2	Q63HR2	1409 aa		31.07	■■■□□ 2.57
ZNF664-208	ENST00000540009	PER1	O15534	1290 aa	Predicted RBP	31.07	■■■□□ 2.56
ZNF664-208	ENST00000540009	AMER1	Q5JTC6	1135 aa	Predicted RBP	31.07	■■■□□ 2.56
ZNF664-208	ENST00000540009	BAG6	P46379	1132 aa		31.06	■■■□□ 2.56
ZNF664-208	ENST00000540009	TNS1	Q9HBL0	1735 aa	Known RBP	31.05	■■■□□ 2.56
ZNF664-208	ENST00000540009	USHBP1	Q8N6Y0	703 aa		31.04	■■■□□ 2.56
ZNF664-208	ENST00000540009	EN1	Q05925	392 aa	Predicted RBP	31.01	■■■□□ 2.55
ZNF664-208	ENST00000540009	APBA3	O96018	575 aa		30.99	■■■□□ 2.55
ZNF664-208	ENST00000540009	CC2D1B	Q5T0F9	858 aa	Known RBP	30.98	■■■□□ 2.55
ZNF664-208	ENST00000540009	MEGF6	O75095	1541 aa		30.98	■■■□□ 2.55
ZNF664-208	ENST00000540009	BCL9	O00512	1426 aa		30.98	■■■□□ 2.55
ZNF664-208	ENST00000540009	SBF2	Q86WG5	1849 aa		30.96	■■■□□ 2.55
ZNF664-208	ENST00000540009	RAPGEF4	Q8WZA2	1011 aa		30.94	■■■□□ 2.54
ZNF664-208	ENST00000540009	EIF4A2	Q14240	407 aa	Known RBP	30.93	■■■□□ 2.54
ZNF664-208	ENST00000540009	EZH2	Q15910	746 aa	Known RBP	30.93	■■■□□ 2.54
ZNF664-208	ENST00000540009	PTF1A	Q7RTS3	328 aa		30.93	■■■□□ 2.54
ZNF664-208	ENST00000540009	DDX54	Q8TDD1	881 aa	Known RBP	30.93	■■■□□ 2.54
ZNF664-208	ENST00000540009	CNGB1	Q14028	1251 aa	Predicted RBP	30.92	■■■□□ 2.54
ZNF664-208	ENST00000540009	ZCRB1	Q8TBF4	217 aa	Known RBP	30.92	■■■□□ 2.54
ZNF664-208	ENST00000540009	TAT	P17735	454 aa	Predicted RBP	30.91	■■■□□ 2.54
ZNF664-208	ENST00000540009	CAMKK2	Q96RR4	588 aa		30.91	■■■□□ 2.54
ZNF664-208	ENST00000540009	EYA1	Q99502	592 aa		30.91	■■■□□ 2.54
ZNF664-208	ENST00000540009	BCL11B	Q9C0K0	894 aa	Predicted RBP	30.91	■■■□□ 2.54

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms