RNA–Protein interactions for RNA: ENST00000539967.6

RFX4-206, Transcript of regulatory factor X4, humanhuman

TSL 5

Gene RFX4, Length 1,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-206ENST00000539967 PRKRIP1Q9H875 184 aaPredicted RBP17.77■□□□□ 0.44
RFX4-206ENST00000539967 PARD3Q8TEW0 1356 aa17.77■□□□□ 0.43
RFX4-206ENST00000539967 NPC1L1Q9UHC9 1359 aa17.77■□□□□ 0.43
RFX4-206ENST00000539967 MAP3K19Q56UN5 1328 aa17.76■□□□□ 0.43
RFX4-206ENST00000539967 MIER1Q8N108 512 aa17.76■□□□□ 0.43
RFX4-206ENST00000539967 POLKQ9UBT6 870 aa17.76■□□□□ 0.43
RFX4-206ENST00000539967 AXIN2Q9Y2T1 843 aa17.76■□□□□ 0.43
RFX4-206ENST00000539967 RGPD2P0DJD1 1756 aa17.76■□□□□ 0.43
RFX4-206ENST00000539967 MYCNP04198 464 aaPredicted RBP17.75■□□□□ 0.43
RFX4-206ENST00000539967 NSD2O96028 1365 aa17.75■□□□□ 0.43
RFX4-206ENST00000539967 ZBTB22O15209 634 aa17.74■□□□□ 0.43
RFX4-206ENST00000539967 MTHFSP49914 203 aa17.74■□□□□ 0.43
RFX4-206ENST00000539967 ARHGEF25Q86VW2 580 aa17.74■□□□□ 0.43
RFX4-206ENST00000539967 ANP32CO43423 234 aa17.72■□□□□ 0.43
RFX4-206ENST00000539967 HSP90AB2PQ58FF8 381 aa17.72■□□□□ 0.43
RFX4-206ENST00000539967 LTV1Q96GA3 475 aaPredicted RBP17.72■□□□□ 0.43
RFX4-206ENST00000539967 C8orf37Q96NL8 207 aa17.72■□□□□ 0.43
RFX4-206ENST00000539967 KCNH5Q8NCM2 988 aa17.71■□□□□ 0.43
RFX4-206ENST00000539967 PLCH1Q4KWH8 1693 aa17.71■□□□□ 0.42
RFX4-206ENST00000539967 CAMTA1Q9Y6Y1 1673 aa17.71■□□□□ 0.42
RFX4-206ENST00000539967 PRDM11Q9NQV5 511 aa17.7■□□□□ 0.42
RFX4-206ENST00000539967 LMO7Q8WWI1 1683 aa17.69■□□□□ 0.42
RFX4-206ENST00000539967 HOXC9P31274 260 aa17.69■□□□□ 0.42
RFX4-206ENST00000539967 AMPHP49418 695 aa17.69■□□□□ 0.42
RFX4-206ENST00000539967 SPATA31A6Q5VVP1 1343 aa17.69■□□□□ 0.42
RFX4-206ENST00000539967 AATKQ6ZMQ8 1374 aa17.68■□□□□ 0.42
RFX4-206ENST00000539967 RALBP1Q15311 655 aa17.68■□□□□ 0.42
RFX4-206ENST00000539967 MEX3CQ5U5Q3 659 aaKnown RBP17.67■□□□□ 0.42
RFX4-206ENST00000539967 CPDO75976 1380 aa17.66■□□□□ 0.42
RFX4-206ENST00000539967 COL14A1Q05707 1796 aaKnown RBP17.66■□□□□ 0.42
RFX4-206ENST00000539967 IP6K1Q92551 441 aa17.66■□□□□ 0.42
RFX4-206ENST00000539967 NGLY1Q96IV0 654 aa17.66■□□□□ 0.42
RFX4-206ENST00000539967 SPINK5Q9NQ38 1064 aaPredicted RBP17.66■□□□□ 0.42
RFX4-206ENST00000539967 STRN4Q9NRL3 753 aa17.66■□□□□ 0.42
RFX4-206ENST00000539967 BTG4Q9NY30 223 aa17.66■□□□□ 0.42
RFX4-206ENST00000539967 MYBBP1AQ9BQG0 1328 aaKnown RBP17.66■□□□□ 0.42
RFX4-206ENST00000539967 NRAPQ86VF7 1730 aa17.65■□□□□ 0.42
RFX4-206ENST00000539967 SAMD1Q6SPF0 538 aaPredicted RBP17.65■□□□□ 0.42
RFX4-206ENST00000539967 COL3A1P02461 1466 aaPredicted RBP17.64■□□□□ 0.41
RFX4-206ENST00000539967 USHBP1Q8N6Y0 703 aa17.64■□□□□ 0.41
RFX4-206ENST00000539967 SMG6Q86US8 1419 aaKnown RBP17.64■□□□□ 0.41
RFX4-206ENST00000539967 EIF4A2Q14240 407 aaKnown RBP17.63■□□□□ 0.41
RFX4-206ENST00000539967 LARP1Q6PKG0 1096 aaKnown RBP17.63■□□□□ 0.41
RFX4-206ENST00000539967 ANKRD24Q8TF21 1146 aa17.63■□□□□ 0.41
RFX4-206ENST00000539967 SENP3-EIF4A1A0A087X0R7 540 aa17.62■□□□□ 0.41
RFX4-206ENST00000539967 AFF2P51816 1311 aa17.62■□□□□ 0.41
RFX4-206ENST00000539967 FLT4P35916 1363 aa17.61■□□□□ 0.41
RFX4-206ENST00000539967 COL5A2P05997 1499 aaPredicted RBP17.61■□□□□ 0.41
RFX4-206ENST00000539967 BCL9LQ86UU0 1499 aa17.61■□□□□ 0.41
RFX4-206ENST00000539967 SLIT2O94813 1529 aa17.61■□□□□ 0.41
RFX4-206ENST00000539967 IL13P35225 146 aa17.6■□□□□ 0.41
RFX4-206ENST00000539967 USP35Q9P2H5 1018 aa17.6■□□□□ 0.41
RFX4-206ENST00000539967 RGS17Q9UGC6 210 aaPredicted RBP17.6■□□□□ 0.41
RFX4-206ENST00000539967 CDK12Q9NYV4 1490 aaPredicted RBP17.6■□□□□ 0.41
RFX4-206ENST00000539967 INSRP06213 1382 aa17.59■□□□□ 0.41
RFX4-206ENST00000539967 EVA1CP58658 441 aa17.59■□□□□ 0.41
RFX4-206ENST00000539967 NBPF6Q5VWK0 638 aa17.59■□□□□ 0.41
RFX4-206ENST00000539967 NBPF4Q96M43 638 aa17.59■□□□□ 0.41
RFX4-206ENST00000539967 NWD2Q9ULI1 1742 aa17.58■□□□□ 0.41
RFX4-206ENST00000539967 CSB-PGBD3P0DP91 1061 aa17.58■□□□□ 0.4
RFX4-206ENST00000539967 AEBP1Q8IUX7 1158 aa17.58■□□□□ 0.4
RFX4-206ENST00000539967 MRS2Q9HD23 443 aa17.58■□□□□ 0.4
RFX4-206ENST00000539967 USP21Q9UK80 565 aa17.58■□□□□ 0.4
RFX4-206ENST00000539967 ERBB3P21860 1342 aa17.57■□□□□ 0.4
RFX4-206ENST00000539967 CAPN15O75808 1086 aa17.57■□□□□ 0.4
RFX4-206ENST00000539967 FNBP4Q8N3X1 1017 aaPredicted RBP17.57■□□□□ 0.4
RFX4-206ENST00000539967 EYA1Q99502 592 aa17.57■□□□□ 0.4
RFX4-206ENST00000539967 NLRP2Q9NX02 1062 aa17.57■□□□□ 0.4
RFX4-206ENST00000539967 RTL1A6NKG5 1358 aa17.56■□□□□ 0.4
RFX4-206ENST00000539967 RGPD1P0DJD0 1748 aa17.56■□□□□ 0.4
RFX4-206ENST00000539967 U2SURPO15042 1029 aaKnown RBP17.56■□□□□ 0.4
RFX4-206ENST00000539967 DIAPH1O60610 1272 aaKnown RBP17.56■□□□□ 0.4
RFX4-206ENST00000539967 HMOX1P09601 288 aa17.56■□□□□ 0.4
RFX4-206ENST00000539967 UNC5CLQ8IV45 518 aa17.55■□□□□ 0.4
RFX4-206ENST00000539967 FAM208AQ9UK61 1670 aaKnown RBP17.55■□□□□ 0.4
RFX4-206ENST00000539967 TOM1L2Q6ZVM7 507 aa17.54■□□□□ 0.4
RFX4-206ENST00000539967 CCDC9Q9Y3X0 531 aaKnown RBP17.54■□□□□ 0.4
RFX4-206ENST00000539967 BLMP54132 1417 aaPredicted RBP17.54■□□□□ 0.4
RFX4-206ENST00000539967 WDR17Q8IZU2 1322 aa17.53■□□□□ 0.4
RFX4-206ENST00000539967 POTEAQ6S8J7 498 aa17.53■□□□□ 0.4
RFX4-206ENST00000539967 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.52■□□□□ 0.4
RFX4-206ENST00000539967 CFAP53Q96M91 514 aa17.52■□□□□ 0.4
RFX4-206ENST00000539967 KIF24Q5T7B8 1368 aa17.52■□□□□ 0.39
RFX4-206ENST00000539967 ABCC6O95255 1503 aa17.52■□□□□ 0.39
RFX4-206ENST00000539967 GLI3P10071 1580 aa17.51■□□□□ 0.39
RFX4-206ENST00000539967 SULT6B1Q6IMI4 303 aa17.51■□□□□ 0.39
RFX4-206ENST00000539967 CCDC146Q8IYE0 955 aa17.51■□□□□ 0.39
RFX4-206ENST00000539967 PNISRQ8TF01 805 aaKnown RBP17.51■□□□□ 0.39
RFX4-206ENST00000539967 QTRT2Q9H974 415 aaKnown RBP17.51■□□□□ 0.39
RFX4-206ENST00000539967 ADAMTS8Q9UP79 889 aa17.51■□□□□ 0.39
RFX4-206ENST00000539967 U2AF1L5P0DN76 240 aaPredicted RBP17.5■□□□□ 0.39
RFX4-206ENST00000539967 U2AF1Q01081 240 aaKnown RBP eCLIP17.5■□□□□ 0.39
RFX4-206ENST00000539967 FAM9BQ8IZU0 186 aa17.5■□□□□ 0.39
RFX4-206ENST00000539967 SPATA31A5Q5VU36 1347 aa17.49■□□□□ 0.39
RFX4-206ENST00000539967 SPATA31A7Q8IWB4 1347 aa17.49■□□□□ 0.39
RFX4-206ENST00000539967 ATRNO75882 1429 aa17.49■□□□□ 0.39
RFX4-206ENST00000539967 WNK3Q9BYP7 1800 aa17.49■□□□□ 0.39
RFX4-206ENST00000539967 SPATA31A1Q5TZJ5 1347 aa17.48■□□□□ 0.39
RFX4-206ENST00000539967 IGSF1Q8N6C5 1336 aa17.48■□□□□ 0.39
RFX4-206ENST00000539967 CRB1P82279 1406 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms