RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 SLC26A8Q96RN1 970 aa13.04□□□□□ -0.32
MDH1-215ENST00000539945 NSD3Q9BZ95 1437 aa13.03□□□□□ -0.32
MDH1-215ENST00000539945 ANKLE2Q86XL3 938 aa13.03□□□□□ -0.32
MDH1-215ENST00000539945 ROBO2Q9HCK4 1378 aa13.03□□□□□ -0.32
MDH1-215ENST00000539945 WASLO00401 505 aaPredicted RBP13.02□□□□□ -0.33
MDH1-215ENST00000539945 PPP2R1AP30153 589 aa13.02□□□□□ -0.33
MDH1-215ENST00000539945 GPR153Q6NV75 609 aa13.02□□□□□ -0.33
MDH1-215ENST00000539945 PTPRUQ92729 1446 aa13.02□□□□□ -0.33
MDH1-215ENST00000539945 TERF2IPQ9NYB0 399 aa13.01□□□□□ -0.33
MDH1-215ENST00000539945 PIK3R4Q99570 1358 aa13.01□□□□□ -0.33
MDH1-215ENST00000539945 ADGRB2O60241 1585 aa13□□□□□ -0.33
MDH1-215ENST00000539945 PTCH1Q13635 1447 aa13□□□□□ -0.33
MDH1-215ENST00000539945 CGNL1Q0VF96 1302 aa13□□□□□ -0.33
MDH1-215ENST00000539945 AMOTL2Q9Y2J4 779 aa13□□□□□ -0.33
MDH1-215ENST00000539945 CD163L1Q9NR16 1453 aa12.99□□□□□ -0.33
MDH1-215ENST00000539945 A0A1W2PP64 1363 aa12.99□□□□□ -0.33
MDH1-215ENST00000539945 NSD2O96028 1365 aa12.99□□□□□ -0.33
MDH1-215ENST00000539945 INSRP06213 1382 aa12.99□□□□□ -0.33
MDH1-215ENST00000539945 ZBED9Q6R2W3 1325 aa12.98□□□□□ -0.33
MDH1-215ENST00000539945 TMEM92Q6UXU6 159 aa12.98□□□□□ -0.33
MDH1-215ENST00000539945 XRN1Q8IZH2 1706 aaKnown RBP12.98□□□□□ -0.33
MDH1-215ENST00000539945 ATP7BP35670 1465 aa12.98□□□□□ -0.33
MDH1-215ENST00000539945 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.98□□□□□ -0.33
MDH1-215ENST00000539945 HDGFL2Q7Z4V5 671 aaPredicted RBP12.97□□□□□ -0.33
MDH1-215ENST00000539945 CABP1Q9NZU7 370 aa12.97□□□□□ -0.33
MDH1-215ENST00000539945 GTF3C3Q9Y5Q9 886 aa12.96□□□□□ -0.33
MDH1-215ENST00000539945 RIOK3O14730 519 aaKnown RBP12.96□□□□□ -0.34
MDH1-215ENST00000539945 MORC1Q86VD1 984 aa12.96□□□□□ -0.34
MDH1-215ENST00000539945 NUDT16Q96DE0 195 aaKnown RBP12.96□□□□□ -0.34
MDH1-215ENST00000539945 CPSF1Q10570 1443 aaKnown RBP12.95□□□□□ -0.34
MDH1-215ENST00000539945 ANKRD13DQ6ZTN6 518 aa12.94□□□□□ -0.34
MDH1-215ENST00000539945 PPIP5K1Q6PFW1 1433 aa12.94□□□□□ -0.34
MDH1-215ENST00000539945 CHD2O14647 1828 aaKnown RBP12.93□□□□□ -0.34
MDH1-215ENST00000539945 NPHP4O75161 1426 aaPredicted RBP12.93□□□□□ -0.34
MDH1-215ENST00000539945 CDC42BPGQ6DT37 1551 aa12.92□□□□□ -0.34
MDH1-215ENST00000539945 BLMP54132 1417 aaPredicted RBP12.92□□□□□ -0.34
MDH1-215ENST00000539945 KCNA6P17658 529 aa12.92□□□□□ -0.34
MDH1-215ENST00000539945 ARSIQ5FYB1 569 aa12.92□□□□□ -0.34
MDH1-215ENST00000539945 POLR3AO14802 1390 aaPredicted RBP12.92□□□□□ -0.34
MDH1-215ENST00000539945 ANKRD26Q9UPS8 1709 aa12.92□□□□□ -0.34
MDH1-215ENST00000539945 PRR36Q9H6K5 1346 aa12.91□□□□□ -0.34
MDH1-215ENST00000539945 FYB1O15117 783 aa12.91□□□□□ -0.34
MDH1-215ENST00000539945 EDC4Q6P2E9 1401 aaKnown RBP12.9□□□□□ -0.34
MDH1-215ENST00000539945 PHF8Q9UPP1 1060 aa12.9□□□□□ -0.34
MDH1-215ENST00000539945 TOPAZ1Q8N9V7 1692 aa12.9□□□□□ -0.34
MDH1-215ENST00000539945 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.89□□□□□ -0.35
MDH1-215ENST00000539945 PLEKHG3A1L390 1219 aa12.89□□□□□ -0.35
MDH1-215ENST00000539945 WDR43Q15061 677 aaKnown RBP eCLIP12.89□□□□□ -0.35
MDH1-215ENST00000539945 ZFP91Q96JP5 570 aaPredicted RBP12.89□□□□□ -0.35
MDH1-215ENST00000539945 MS4A4AQ96JQ5 239 aa12.89□□□□□ -0.35
MDH1-215ENST00000539945 TAOK2Q9UL54 1235 aa12.89□□□□□ -0.35
MDH1-215ENST00000539945 ADAMTS8Q9UP79 889 aa12.89□□□□□ -0.35
MDH1-215ENST00000539945 KIF20BQ96Q89 1820 aa12.89□□□□□ -0.35
MDH1-215ENST00000539945 MON2Q7Z3U7 1717 aa12.89□□□□□ -0.35
MDH1-215ENST00000539945 AKAP12Q02952 1782 aa12.89□□□□□ -0.35
MDH1-215ENST00000539945 GGNBP2Q9H3C7 697 aa12.88□□□□□ -0.35
MDH1-215ENST00000539945 NCKAP5LQ9HCH0 1330 aa12.88□□□□□ -0.35
MDH1-215ENST00000539945 ITSN1Q15811 1721 aa12.88□□□□□ -0.35
MDH1-215ENST00000539945 TNNT2P45379 298 aaPredicted RBP12.88□□□□□ -0.35
MDH1-215ENST00000539945 NLRP6P59044 892 aa12.88□□□□□ -0.35
MDH1-215ENST00000539945 LSM11P83369 360 aaKnown RBP eCLIP12.88□□□□□ -0.35
MDH1-215ENST00000539945 PBX2P40425 430 aa12.87□□□□□ -0.35
MDH1-215ENST00000539945 MTHFSP49914 203 aa12.87□□□□□ -0.35
MDH1-215ENST00000539945 ANKARQ7Z5J8 1434 aa12.86□□□□□ -0.35
MDH1-215ENST00000539945 KDM4FA0A1W2PPD8 638 aa12.86□□□□□ -0.35
MDH1-215ENST00000539945 CFAP53Q96M91 514 aa12.86□□□□□ -0.35
MDH1-215ENST00000539945 NWD1Q149M9 1564 aa12.85□□□□□ -0.35
MDH1-215ENST00000539945 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.85□□□□□ -0.35
MDH1-215ENST00000539945 ACEP12821 1306 aa12.85□□□□□ -0.35
MDH1-215ENST00000539945 FMN2Q9NZ56 1722 aa12.84□□□□□ -0.35
MDH1-215ENST00000539945 SMG6Q86US8 1419 aaKnown RBP12.84□□□□□ -0.35
MDH1-215ENST00000539945 NKTRP30414 1462 aaKnown RBP12.84□□□□□ -0.35
MDH1-215ENST00000539945 SHPRHQ149N8 1683 aa12.84□□□□□ -0.35
MDH1-215ENST00000539945 PDE3BQ13370 1112 aa12.83□□□□□ -0.36
MDH1-215ENST00000539945 NALCNQ8IZF0 1738 aa12.83□□□□□ -0.36
MDH1-215ENST00000539945 NRKQ7Z2Y5 1582 aa12.83□□□□□ -0.36
MDH1-215ENST00000539945 USP6P35125 1406 aa12.82□□□□□ -0.36
MDH1-215ENST00000539945 ADGRL3Q9HAR2 1447 aa12.82□□□□□ -0.36
MDH1-215ENST00000539945 NUTM2FA1L443 756 aa12.82□□□□□ -0.36
MDH1-215ENST00000539945 SSH2Q76I76 1423 aa12.82□□□□□ -0.36
MDH1-215ENST00000539945 NME9Q86XW9 330 aa12.81□□□□□ -0.36
MDH1-215ENST00000539945 NUDCQ9Y266 331 aa12.81□□□□□ -0.36
MDH1-215ENST00000539945 TTC21BQ7Z4L5 1316 aa12.81□□□□□ -0.36
MDH1-215ENST00000539945 AATKQ6ZMQ8 1374 aa12.81□□□□□ -0.36
MDH1-215ENST00000539945 PNPLA6Q8IY17 1366 aa12.81□□□□□ -0.36
MDH1-215ENST00000539945 RGPD8O14715 1765 aaPredicted RBP12.81□□□□□ -0.36
MDH1-215ENST00000539945 NGEFQ8N5V2 710 aa12.8□□□□□ -0.36
MDH1-215ENST00000539945 COL3A1P02461 1466 aaPredicted RBP12.8□□□□□ -0.36
MDH1-215ENST00000539945 COG3Q96JB2 828 aa12.79□□□□□ -0.36
MDH1-215ENST00000539945 SENP3-EIF4A1A0A087X0R7 540 aa12.79□□□□□ -0.36
MDH1-215ENST00000539945 RNF25Q96BH1 459 aaPredicted RBP12.79□□□□□ -0.36
MDH1-215ENST00000539945 POLKQ9UBT6 870 aa12.79□□□□□ -0.36
MDH1-215ENST00000539945 TTC21AQ8NDW8 1320 aa12.79□□□□□ -0.36
MDH1-215ENST00000539945 LMTK3Q96Q04 1460 aa12.78□□□□□ -0.36
MDH1-215ENST00000539945 NGDNQ8NEJ9 315 aaKnown RBP12.78□□□□□ -0.36
MDH1-215ENST00000539945 PMFBP1Q8TBY8 1022 aa12.78□□□□□ -0.36
MDH1-215ENST00000539945 OVOS2A0A0J9YW53 1432 aa12.77□□□□□ -0.37
MDH1-215ENST00000539945 OVOS2Q6IE36 1432 aa12.77□□□□□ -0.37
MDH1-215ENST00000539945 ZNF521Q96K83 1311 aa12.77□□□□□ -0.37
MDH1-215ENST00000539945 NEFLP07196 543 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms