RNA–Protein interactions for RNA: ENST00000539782.1

LDHB-208, Transcript of lactate dehydrogenase B, humanhuman

TSL 3

Gene LDHB, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-208ENST00000539782 CPSF1Q10570 1443 aaKnown RBP10.32□□□□□ -0.76
LDHB-208ENST00000539782 PLSCR1O15162 318 aa10.31□□□□□ -0.76
LDHB-208ENST00000539782 RGPD3A6NKT7 1758 aaPredicted RBP10.31□□□□□ -0.76
LDHB-208ENST00000539782 RGPD4Q7Z3J3 1758 aa10.31□□□□□ -0.76
LDHB-208ENST00000539782 PIK3C2AO00443 1686 aa10.31□□□□□ -0.76
LDHB-208ENST00000539782 PEAK1Q9H792 1746 aa10.3□□□□□ -0.76
LDHB-208ENST00000539782 TRPM1Q7Z4N2 1603 aa10.3□□□□□ -0.76
LDHB-208ENST00000539782 ZNF692Q9BU19 519 aaPredicted RBP10.3□□□□□ -0.76
LDHB-208ENST00000539782 STK32BQ9NY57 414 aa10.3□□□□□ -0.76
LDHB-208ENST00000539782 TTC21BQ7Z4L5 1316 aa10.3□□□□□ -0.76
LDHB-208ENST00000539782 ROCK2O75116 1388 aaKnown RBP10.29□□□□□ -0.76
LDHB-208ENST00000539782 WNK3Q9BYP7 1800 aa10.29□□□□□ -0.76
LDHB-208ENST00000539782 ANO8Q9HCE9 1232 aaPredicted RBP10.29□□□□□ -0.76
LDHB-208ENST00000539782 TTC21AQ8NDW8 1320 aa10.29□□□□□ -0.76
LDHB-208ENST00000539782 AKAP12Q02952 1782 aa10.29□□□□□ -0.76
LDHB-208ENST00000539782 CCDC7Q96M83 1385 aa10.28□□□□□ -0.76
LDHB-208ENST00000539782 EXOC5O00471 708 aa10.28□□□□□ -0.76
LDHB-208ENST00000539782 ZBTB7AO95365 584 aa10.28□□□□□ -0.76
LDHB-208ENST00000539782 ARHGEF25Q86VW2 580 aa10.28□□□□□ -0.76
LDHB-208ENST00000539782 MARCH10Q8NA82 808 aaPredicted RBP10.28□□□□□ -0.76
LDHB-208ENST00000539782 L3MBTL2Q969R5 705 aa10.28□□□□□ -0.76
LDHB-208ENST00000539782 CARD10Q9BWT7 1032 aa10.28□□□□□ -0.76
LDHB-208ENST00000539782 AXIN2Q9Y2T1 843 aa10.28□□□□□ -0.76
LDHB-208ENST00000539782 KTN1Q86UP2 1357 aaKnown RBP10.27□□□□□ -0.76
LDHB-208ENST00000539782 SBF2Q86WG5 1849 aa10.27□□□□□ -0.77
LDHB-208ENST00000539782 COL18A1P39060 1754 aa10.26□□□□□ -0.77
LDHB-208ENST00000539782 BCL9O00512 1426 aa10.26□□□□□ -0.77
LDHB-208ENST00000539782 TNS2Q63HR2 1409 aa10.26□□□□□ -0.77
LDHB-208ENST00000539782 TXNRD1Q16881 649 aa10.26□□□□□ -0.77
LDHB-208ENST00000539782 PTF1AQ7RTS3 328 aa10.26□□□□□ -0.77
LDHB-208ENST00000539782 ATF5Q9Y2D1 282 aaPredicted RBP10.26□□□□□ -0.77
LDHB-208ENST00000539782 ABCC6O95255 1503 aa10.26□□□□□ -0.77
LDHB-208ENST00000539782 CASZ1Q86V15 1759 aa10.26□□□□□ -0.77
LDHB-208ENST00000539782 NEUROD1Q13562 356 aa10.25□□□□□ -0.77
LDHB-208ENST00000539782 SLC15A2Q16348 729 aa10.25□□□□□ -0.77
LDHB-208ENST00000539782 NLRP2Q9NX02 1062 aa10.25□□□□□ -0.77
LDHB-208ENST00000539782 NFAT5O94916 1531 aa10.24□□□□□ -0.77
LDHB-208ENST00000539782 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.24□□□□□ -0.77
LDHB-208ENST00000539782 MYOM1P52179 1685 aa10.24□□□□□ -0.77
LDHB-208ENST00000539782 HDGFL2Q7Z4V5 671 aaPredicted RBP10.23□□□□□ -0.77
LDHB-208ENST00000539782 PROM2Q8N271 834 aa10.23□□□□□ -0.77
LDHB-208ENST00000539782 TMC1Q8TDI8 760 aa10.23□□□□□ -0.77
LDHB-208ENST00000539782 ACSBG1Q96GR2 724 aa10.23□□□□□ -0.77
LDHB-208ENST00000539782 SIN3AQ96ST3 1273 aa10.23□□□□□ -0.77
LDHB-208ENST00000539782 PDGFDQ9GZP0 370 aaPredicted RBP10.23□□□□□ -0.77
LDHB-208ENST00000539782 MTFR1LQ9H019 292 aa10.23□□□□□ -0.77
LDHB-208ENST00000539782 RGPD5Q99666 1765 aa10.23□□□□□ -0.77
LDHB-208ENST00000539782 IL2RBP14784 551 aa10.22□□□□□ -0.77
LDHB-208ENST00000539782 NHSQ6T4R5 1651 aa10.22□□□□□ -0.77
LDHB-208ENST00000539782 MON2Q7Z3U7 1717 aa10.21□□□□□ -0.77
LDHB-208ENST00000539782 PTGER2P43116 358 aa10.21□□□□□ -0.77
LDHB-208ENST00000539782 NME9Q86XW9 330 aa10.21□□□□□ -0.77
LDHB-208ENST00000539782 ANKRD24Q8TF21 1146 aa10.21□□□□□ -0.77
LDHB-208ENST00000539782 FHDC1Q9C0D6 1143 aaPredicted RBP10.21□□□□□ -0.77
LDHB-208ENST00000539782 ERBB3P21860 1342 aa10.21□□□□□ -0.78
LDHB-208ENST00000539782 USP31Q70CQ4 1352 aa10.21□□□□□ -0.78
LDHB-208ENST00000539782 CARD11Q9BXL7 1154 aa10.2□□□□□ -0.78
LDHB-208ENST00000539782 SBNO2Q9Y2G9 1366 aa10.2□□□□□ -0.78
LDHB-208ENST00000539782 KLHL34Q8N239 644 aa10.19□□□□□ -0.78
LDHB-208ENST00000539782 ARXQ96QS3 562 aa10.19□□□□□ -0.78
LDHB-208ENST00000539782 SYT17Q9BSW7 474 aa10.19□□□□□ -0.78
LDHB-208ENST00000539782 TERF2IPQ9NYB0 399 aa10.19□□□□□ -0.78
LDHB-208ENST00000539782 EDC4Q6P2E9 1401 aaKnown RBP10.18□□□□□ -0.78
LDHB-208ENST00000539782 LTN1O94822 1766 aa10.18□□□□□ -0.78
LDHB-208ENST00000539782 USP54Q70EL1 1684 aa10.18□□□□□ -0.78
LDHB-208ENST00000539782 POLD1P28340 1107 aa10.17□□□□□ -0.78
LDHB-208ENST00000539782 ZNF784Q8NCA9 323 aaPredicted RBP10.17□□□□□ -0.78
LDHB-208ENST00000539782 DDX54Q8TDD1 881 aaKnown RBP10.17□□□□□ -0.78
LDHB-208ENST00000539782 LTV1Q96GA3 475 aaPredicted RBP10.17□□□□□ -0.78
LDHB-208ENST00000539782 PAPPAQ13219 1627 aa10.16□□□□□ -0.78
LDHB-208ENST00000539782 GPR162Q16538 588 aa10.16□□□□□ -0.78
LDHB-208ENST00000539782 ZNF827Q17R98 1081 aa10.16□□□□□ -0.78
LDHB-208ENST00000539782 PELP1Q8IZL8 1130 aaKnown RBP10.16□□□□□ -0.78
LDHB-208ENST00000539782 SYTL4Q96C24 671 aaPredicted RBP10.16□□□□□ -0.78
LDHB-208ENST00000539782 BTAF1O14981 1849 aa10.16□□□□□ -0.78
LDHB-208ENST00000539782 CD163L1Q9NR16 1453 aa10.16□□□□□ -0.78
LDHB-208ENST00000539782 A0A1W2PP64 1363 aa10.15□□□□□ -0.78
LDHB-208ENST00000539782 TONSLQ96HA7 1378 aa10.15□□□□□ -0.78
LDHB-208ENST00000539782 SLC27A3Q5K4L6 730 aa10.15□□□□□ -0.78
LDHB-208ENST00000539782 COG3Q96JB2 828 aa10.15□□□□□ -0.78
LDHB-208ENST00000539782 SGIP1Q9BQI5 828 aa10.15□□□□□ -0.78
LDHB-208ENST00000539782 SLC12A5Q9H2X9 1139 aa10.15□□□□□ -0.78
LDHB-208ENST00000539782 FAM208AQ9UK61 1670 aaKnown RBP10.15□□□□□ -0.79
LDHB-208ENST00000539782 MAP3K5Q99683 1374 aa10.14□□□□□ -0.79
LDHB-208ENST00000539782 AMPHP49418 695 aa10.14□□□□□ -0.79
LDHB-208ENST00000539782 SLC16A10Q8TF71 515 aa10.14□□□□□ -0.79
LDHB-208ENST00000539782 IP6K1Q92551 441 aa10.14□□□□□ -0.79
LDHB-208ENST00000539782 TFCP2L1Q9NZI6 479 aa10.14□□□□□ -0.79
LDHB-208ENST00000539782 SENP3-EIF4A1A0A087X0R7 540 aa10.13□□□□□ -0.79
LDHB-208ENST00000539782 MSH5O43196 834 aa10.13□□□□□ -0.79
LDHB-208ENST00000539782 LRRC4BQ9NT99 713 aa10.13□□□□□ -0.79
LDHB-208ENST00000539782 AKT1S1Q96B36 256 aa10.12□□□□□ -0.79
LDHB-208ENST00000539782 ANKRD36BQ8N2N9 1353 aa10.12□□□□□ -0.79
LDHB-208ENST00000539782 SMG6Q86US8 1419 aaKnown RBP10.11□□□□□ -0.79
LDHB-208ENST00000539782 HOXC9P31274 260 aa10.11□□□□□ -0.79
LDHB-208ENST00000539782 PRIM1P49642 420 aaKnown RBP10.11□□□□□ -0.79
LDHB-208ENST00000539782 ZCRB1Q8TBF4 217 aaKnown RBP10.11□□□□□ -0.79
LDHB-208ENST00000539782 PUS7Q96PZ0 661 aaKnown RBP10.11□□□□□ -0.79
LDHB-208ENST00000539782 CCNL1Q9UK58 526 aaPredicted RBP10.11□□□□□ -0.79
LDHB-208ENST00000539782 DOT1LQ8TEK3 1739 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms