RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 XPCQ01831 940 aaPredicted RBP15.47■□□□□ 0.07
VTN-202ENST00000539746 NUTM2GQ5VZR2 741 aa15.47■□□□□ 0.07
VTN-202ENST00000539746 MAP2P11137 1827 aaKnown RBP15.47■□□□□ 0.07
VTN-202ENST00000539746 ROBO1Q9Y6N7 1651 aa15.47■□□□□ 0.07
VTN-202ENST00000539746 SOX12O15370 315 aa15.46■□□□□ 0.07
VTN-202ENST00000539746 ZRANB1Q9UGI0 708 aa15.46■□□□□ 0.07
VTN-202ENST00000539746 EIF4A2Q14240 407 aaKnown RBP15.44■□□□□ 0.06
VTN-202ENST00000539746 GAS2L2Q8NHY3 880 aa15.44■□□□□ 0.06
VTN-202ENST00000539746 PRDM11Q9NQV5 511 aa15.44■□□□□ 0.06
VTN-202ENST00000539746 AMOTQ4VCS5 1084 aa15.43■□□□□ 0.06
VTN-202ENST00000539746 WDR63Q8IWG1 891 aa15.43■□□□□ 0.06
VTN-202ENST00000539746 IGSF1Q8N6C5 1336 aa15.43■□□□□ 0.06
VTN-202ENST00000539746 SHPRHQ149N8 1683 aa15.42■□□□□ 0.06
VTN-202ENST00000539746 GOLGA2Q08379 1002 aa15.42■□□□□ 0.06
VTN-202ENST00000539746 HSP90AB2PQ58FF8 381 aa15.42■□□□□ 0.06
VTN-202ENST00000539746 CHMP4AQ9BY43 222 aa15.42■□□□□ 0.06
VTN-202ENST00000539746 MYH16Q9H6N6 1097 aa15.42■□□□□ 0.06
VTN-202ENST00000539746 FAM208AQ9UK61 1670 aaKnown RBP15.41■□□□□ 0.06
VTN-202ENST00000539746 KDRP35968 1356 aa15.41■□□□□ 0.06
VTN-202ENST00000539746 JCADQ9P266 1359 aa15.41■□□□□ 0.06
VTN-202ENST00000539746 E9PSI1 815 aa15.41■□□□□ 0.06
VTN-202ENST00000539746 HTATSF1O43719 755 aaKnown RBP15.41■□□□□ 0.06
VTN-202ENST00000539746 TCP11L2Q8N4U5 519 aa15.41■□□□□ 0.06
VTN-202ENST00000539746 IL16Q14005 1332 aa15.41■□□□□ 0.06
VTN-202ENST00000539746 COL22A1Q8NFW1 1626 aaPredicted RBP15.4■□□□□ 0.06
VTN-202ENST00000539746 ZBTB7CA1YPR0 619 aa15.4■□□□□ 0.06
VTN-202ENST00000539746 APAF1O14727 1248 aa15.4■□□□□ 0.06
VTN-202ENST00000539746 CSB-PGBD3P0DP91 1061 aa15.4■□□□□ 0.06
VTN-202ENST00000539746 PRKAR2BP31323 418 aa15.4■□□□□ 0.06
VTN-202ENST00000539746 PIP4K2BP78356 416 aa15.4■□□□□ 0.06
VTN-202ENST00000539746 SULT6B1Q6IMI4 303 aa15.4■□□□□ 0.06
VTN-202ENST00000539746 RTF1Q92541 710 aaKnown RBP15.4■□□□□ 0.06
VTN-202ENST00000539746 RSPH6AQ9H0K4 717 aa15.4■□□□□ 0.06
VTN-202ENST00000539746 SPATA31A6Q5VVP1 1343 aa15.4■□□□□ 0.06
VTN-202ENST00000539746 PHLPP1O60346 1717 aa15.4■□□□□ 0.06
VTN-202ENST00000539746 NFE2L2Q16236 605 aa15.39■□□□□ 0.05
VTN-202ENST00000539746 ANKRD24Q8TF21 1146 aa15.39■□□□□ 0.05
VTN-202ENST00000539746 NEFLP07196 543 aa15.38■□□□□ 0.05
VTN-202ENST00000539746 EVA1CP58658 441 aa15.38■□□□□ 0.05
VTN-202ENST00000539746 RAPGEF4Q8WZA2 1011 aa15.38■□□□□ 0.05
VTN-202ENST00000539746 LTN1O94822 1766 aa15.38■□□□□ 0.05
VTN-202ENST00000539746 ERBB3P21860 1342 aa15.38■□□□□ 0.05
VTN-202ENST00000539746 KIAA0232Q92628 1395 aa15.37■□□□□ 0.05
VTN-202ENST00000539746 MARF1Q9Y4F3 1742 aaKnown RBP15.37■□□□□ 0.05
VTN-202ENST00000539746 CT47B1P0C2W7 299 aaPredicted RBP15.37■□□□□ 0.05
VTN-202ENST00000539746 ZC3H6P61129 1189 aaKnown RBP15.37■□□□□ 0.05
VTN-202ENST00000539746 PLEKHO1Q53GL0 409 aaPredicted RBP15.37■□□□□ 0.05
VTN-202ENST00000539746 PLEKHF1Q96S99 279 aa15.37■□□□□ 0.05
VTN-202ENST00000539746 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.37■□□□□ 0.05
VTN-202ENST00000539746 TMPOP42166 694 aaKnown RBP15.36■□□□□ 0.05
VTN-202ENST00000539746 CCDC146Q8IYE0 955 aa15.36■□□□□ 0.05
VTN-202ENST00000539746 CDCA7Q9BWT1 371 aaPredicted RBP15.36■□□□□ 0.05
VTN-202ENST00000539746 HSP90AB1P08238 724 aaKnown RBP15.35■□□□□ 0.05
VTN-202ENST00000539746 RIPK4P57078 832 aa15.35■□□□□ 0.05
VTN-202ENST00000539746 DDX17Q92841 729 aaKnown RBP15.35■□□□□ 0.05
VTN-202ENST00000539746 EYA1Q99502 592 aa15.35■□□□□ 0.05
VTN-202ENST00000539746 SPG7Q9UQ90 795 aa15.35■□□□□ 0.05
VTN-202ENST00000539746 HMOX1P09601 288 aa15.34■□□□□ 0.05
VTN-202ENST00000539746 WWC1Q8IX03 1113 aa15.34■□□□□ 0.05
VTN-202ENST00000539746 ZNF428Q96B54 188 aa15.34■□□□□ 0.05
VTN-202ENST00000539746 BABAM1Q9NWV8 329 aa15.34■□□□□ 0.05
VTN-202ENST00000539746 NLRP2Q9NX02 1062 aa15.34■□□□□ 0.05
VTN-202ENST00000539746 WDR17Q8IZU2 1322 aa15.34■□□□□ 0.05
VTN-202ENST00000539746 PEAK1Q9H792 1746 aa15.34■□□□□ 0.05
VTN-202ENST00000539746 COL16A1Q07092 1604 aaPredicted RBP15.33■□□□□ 0.04
VTN-202ENST00000539746 TATP17735 454 aaPredicted RBP15.33■□□□□ 0.04
VTN-202ENST00000539746 GNAI1P63096 354 aa15.33■□□□□ 0.04
VTN-202ENST00000539746 C1orf141Q5JVX7 400 aa15.33■□□□□ 0.04
VTN-202ENST00000539746 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.33■□□□□ 0.04
VTN-202ENST00000539746 LTV1Q96GA3 475 aaPredicted RBP15.33■□□□□ 0.04
VTN-202ENST00000539746 COL14A1Q05707 1796 aaKnown RBP15.33■□□□□ 0.04
VTN-202ENST00000539746 NCAPD2Q15021 1401 aa15.33■□□□□ 0.04
VTN-202ENST00000539746 RGPD1P0DJD0 1748 aa15.32■□□□□ 0.04
VTN-202ENST00000539746 CRYBG1Q9Y4K1 1723 aa15.31■□□□□ 0.04
VTN-202ENST00000539746 FBLN1P23142 703 aa15.31■□□□□ 0.04
VTN-202ENST00000539746 TOM1L2Q6ZVM7 507 aa15.31■□□□□ 0.04
VTN-202ENST00000539746 PHF23Q9BUL5 403 aaPredicted RBP15.31■□□□□ 0.04
VTN-202ENST00000539746 CARD10Q9BWT7 1032 aa15.31■□□□□ 0.04
VTN-202ENST00000539746 THRAP3Q9Y2W1 955 aaKnown RBP15.31■□□□□ 0.04
VTN-202ENST00000539746 ZNF521Q96K83 1311 aa15.31■□□□□ 0.04
VTN-202ENST00000539746 OVOS2A0A0G2JMS6 1433 aa15.3■□□□□ 0.04
VTN-202ENST00000539746 GNAT3A8MTJ3 354 aa15.3■□□□□ 0.04
VTN-202ENST00000539746 SOS1Q07889 1333 aaPredicted RBP15.3■□□□□ 0.04
VTN-202ENST00000539746 NEUROD2Q15784 382 aa15.3■□□□□ 0.04
VTN-202ENST00000539746 CABLES1Q8TDN4 633 aa15.29■□□□□ 0.04
VTN-202ENST00000539746 IFT57Q9NWB7 429 aa15.29■□□□□ 0.04
VTN-202ENST00000539746 CRB1P82279 1406 aa15.28■□□□□ 0.04
VTN-202ENST00000539746 MAP3K5Q99683 1374 aa15.28■□□□□ 0.04
VTN-202ENST00000539746 PLEKHG5O94827 1062 aa15.28■□□□□ 0.04
VTN-202ENST00000539746 AKAP4Q5JQC9 854 aa15.28■□□□□ 0.04
VTN-202ENST00000539746 ABCA3Q99758 1704 aa15.28■□□□□ 0.04
VTN-202ENST00000539746 CAMTA1Q9Y6Y1 1673 aa15.28■□□□□ 0.04
VTN-202ENST00000539746 COL5A2P05997 1499 aaPredicted RBP15.27■□□□□ 0.04
VTN-202ENST00000539746 SLFN5Q08AF3 891 aa15.27■□□□□ 0.04
VTN-202ENST00000539746 NBPF6Q5VWK0 638 aa15.27■□□□□ 0.04
VTN-202ENST00000539746 ERICH6BQ5W0A0 696 aa15.27■□□□□ 0.04
VTN-202ENST00000539746 NBPF4Q96M43 638 aa15.27■□□□□ 0.04
VTN-202ENST00000539746 SALL2Q9Y467 1007 aaPredicted RBP15.27■□□□□ 0.04
VTN-202ENST00000539746 MS4A1P11836 297 aa15.26■□□□□ 0.03
VTN-202ENST00000539746 PCDH11XQ9BZA7 1347 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms