RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 NEK4P51957 841 aa7.72□□□□□ -1.17
LSAMP-207ENST00000539563 PDILTQ8N807 584 aa7.72□□□□□ -1.17
LSAMP-207ENST00000539563 SULT6B1Q6IMI4 303 aa7.72□□□□□ -1.17
LSAMP-207ENST00000539563 HSP90B2PQ58FF3 399 aa7.72□□□□□ -1.17
LSAMP-207ENST00000539563 NACAP1Q9BZK3 213 aa7.72□□□□□ -1.17
LSAMP-207ENST00000539563 POLA1P09884 1462 aaPredicted RBP7.72□□□□□ -1.17
LSAMP-207ENST00000539563 CYP46A1Q9Y6A2 500 aa7.72□□□□□ -1.17
LSAMP-207ENST00000539563 PCF11O94913 1555 aaKnown RBP7.72□□□□□ -1.17
LSAMP-207ENST00000539563 SLC4A2P04920 1241 aa7.72□□□□□ -1.17
LSAMP-207ENST00000539563 HSP90AB2PQ58FF8 381 aa7.72□□□□□ -1.17
LSAMP-207ENST00000539563 NOM1Q5C9Z4 860 aaKnown RBP7.72□□□□□ -1.17
LSAMP-207ENST00000539563 RBM42Q9BTD8 480 aaKnown RBP7.72□□□□□ -1.17
LSAMP-207ENST00000539563 DCAF8L1A6NGE4 600 aa7.72□□□□□ -1.17
LSAMP-207ENST00000539563 CCAR1Q8IX12 1150 aaKnown RBP7.72□□□□□ -1.17
LSAMP-207ENST00000539563 MAP7D2Q96T17 732 aa7.72□□□□□ -1.17
LSAMP-207ENST00000539563 FAM135AQ9P2D6 1515 aa7.71□□□□□ -1.17
LSAMP-207ENST00000539563 CCDC57Q2TAC2 916 aa7.71□□□□□ -1.17
LSAMP-207ENST00000539563 ATF7IPQ6VMQ6 1270 aa7.71□□□□□ -1.17
LSAMP-207ENST00000539563 CAGE1Q8TC20 777 aa7.71□□□□□ -1.18
LSAMP-207ENST00000539563 ANKLE2Q86XL3 938 aa7.71□□□□□ -1.18
LSAMP-207ENST00000539563 WDR97A6NE52 1622 aa7.71□□□□□ -1.18
LSAMP-207ENST00000539563 ITSN2Q9NZM3 1697 aa7.71□□□□□ -1.18
LSAMP-207ENST00000539563 TRIM22Q8IYM9 498 aa7.71□□□□□ -1.18
LSAMP-207ENST00000539563 TXLNBQ8N3L3 684 aa7.71□□□□□ -1.18
LSAMP-207ENST00000539563 STIM1Q13586 685 aa7.71□□□□□ -1.18
LSAMP-207ENST00000539563 SLC12A5Q9H2X9 1139 aa7.71□□□□□ -1.18
LSAMP-207ENST00000539563 LUC7LQ9NQ29 371 aaKnown RBP7.71□□□□□ -1.18
LSAMP-207ENST00000539563 SYCP1Q15431 976 aa7.7□□□□□ -1.18
LSAMP-207ENST00000539563 RRP12Q5JTH9 1297 aaKnown RBP7.7□□□□□ -1.18
LSAMP-207ENST00000539563 SAMD1Q6SPF0 538 aaPredicted RBP7.7□□□□□ -1.18
LSAMP-207ENST00000539563 WDR33Q9C0J8 1336 aaKnown RBP7.7□□□□□ -1.18
LSAMP-207ENST00000539563 CCDC69A6NI79 296 aa7.7□□□□□ -1.18
LSAMP-207ENST00000539563 CDCA7LQ96GN5 454 aa7.7□□□□□ -1.18
LSAMP-207ENST00000539563 TRIM5Q9C035 493 aa7.7□□□□□ -1.18
LSAMP-207ENST00000539563 MVPQ14764 893 aaKnown RBP7.7□□□□□ -1.18
LSAMP-207ENST00000539563 TOM1L2Q6ZVM7 507 aa7.7□□□□□ -1.18
LSAMP-207ENST00000539563 CABP1Q9NZU7 370 aa7.7□□□□□ -1.18
LSAMP-207ENST00000539563 STRN4Q9NRL3 753 aa7.7□□□□□ -1.18
LSAMP-207ENST00000539563 NESP48681 1621 aa7.7□□□□□ -1.18
LSAMP-207ENST00000539563 ZFYVE27Q5T4F4 411 aa7.7□□□□□ -1.18
LSAMP-207ENST00000539563 CAVIN1Q6NZI2 390 aaKnown RBP7.7□□□□□ -1.18
LSAMP-207ENST00000539563 BTBD11A6QL63 1104 aa7.7□□□□□ -1.18
LSAMP-207ENST00000539563 CDKL5O76039 1030 aa7.7□□□□□ -1.18
LSAMP-207ENST00000539563 NBPF1Q3BBV0 1214 aa7.7□□□□□ -1.18
LSAMP-207ENST00000539563 ZNHIT6Q9NWK9 470 aaKnown RBP7.7□□□□□ -1.18
LSAMP-207ENST00000539563 FCHSD2O94868 740 aa7.69□□□□□ -1.18
LSAMP-207ENST00000539563 SMC2O95347 1197 aa7.69□□□□□ -1.18
LSAMP-207ENST00000539563 KRT32Q14532 448 aa7.69□□□□□ -1.18
LSAMP-207ENST00000539563 CTNNA3Q9UI47 895 aa7.69□□□□□ -1.18
LSAMP-207ENST00000539563 STK38Q15208 465 aa7.69□□□□□ -1.18
LSAMP-207ENST00000539563 CHD1LQ86WJ1 897 aa7.69□□□□□ -1.18
LSAMP-207ENST00000539563 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.69□□□□□ -1.18
LSAMP-207ENST00000539563 DCTN1Q14203 1278 aa7.69□□□□□ -1.18
LSAMP-207ENST00000539563 KRI1Q8N9T8 703 aaKnown RBP7.69□□□□□ -1.18
LSAMP-207ENST00000539563 MPHOSPH8Q99549 860 aa7.69□□□□□ -1.18
LSAMP-207ENST00000539563 K7ELQ4 463 aaPredicted RBP7.69□□□□□ -1.18
LSAMP-207ENST00000539563 FAM13BQ9NYF5 915 aa7.69□□□□□ -1.18
LSAMP-207ENST00000539563 ZNF530Q6P9A1 599 aaPredicted RBP7.69□□□□□ -1.18
LSAMP-207ENST00000539563 KCNH5Q8NCM2 988 aa7.69□□□□□ -1.18
LSAMP-207ENST00000539563 NOL7Q9UMY1 257 aaKnown RBP7.69□□□□□ -1.18
LSAMP-207ENST00000539563 CCDC192P0DO97 292 aa7.69□□□□□ -1.18
LSAMP-207ENST00000539563 CFAP45Q9UL16 551 aa7.69□□□□□ -1.18
LSAMP-207ENST00000539563 C1orf115Q9H7X2 142 aa7.68□□□□□ -1.18
LSAMP-207ENST00000539563 MTMR7Q9Y216 660 aa7.68□□□□□ -1.18
LSAMP-207ENST00000539563 KIAA0586Q9BVV6 1533 aa7.68□□□□□ -1.18
LSAMP-207ENST00000539563 KRT85P78386 507 aa7.68□□□□□ -1.18
LSAMP-207ENST00000539563 SF3B2Q13435 895 aaKnown RBP7.68□□□□□ -1.18
LSAMP-207ENST00000539563 FAM177BA6PVY3 158 aa7.68□□□□□ -1.18
LSAMP-207ENST00000539563 TMEM132AQ24JP5 1023 aa7.68□□□□□ -1.18
LSAMP-207ENST00000539563 PHF23Q9BUL5 403 aaPredicted RBP7.68□□□□□ -1.18
LSAMP-207ENST00000539563 CTTNBP2Q8WZ74 1663 aa7.68□□□□□ -1.18
LSAMP-207ENST00000539563 GNAT3A8MTJ3 354 aa7.68□□□□□ -1.18
LSAMP-207ENST00000539563 PRPF40AO75400 957 aaKnown RBP7.68□□□□□ -1.18
LSAMP-207ENST00000539563 ERLIN2O94905 339 aa7.68□□□□□ -1.18
LSAMP-207ENST00000539563 NFE2L2Q16236 605 aa7.68□□□□□ -1.18
LSAMP-207ENST00000539563 MAP3K1Q13233 1512 aa7.68□□□□□ -1.18
LSAMP-207ENST00000539563 KRT18P05783 430 aaKnown RBP7.68□□□□□ -1.18
LSAMP-207ENST00000539563 ZSCAN31Q96LW9 406 aaPredicted RBP7.68□□□□□ -1.18
LSAMP-207ENST00000539563 CWC15Q9P013 229 aaKnown RBP7.68□□□□□ -1.18
LSAMP-207ENST00000539563 RAB11FIP3O75154 756 aa7.68□□□□□ -1.18
LSAMP-207ENST00000539563 KLHL34Q8N239 644 aa7.68□□□□□ -1.18
LSAMP-207ENST00000539563 MYL6BP14649 208 aa7.68□□□□□ -1.18
LSAMP-207ENST00000539563 NSD3Q9BZ95 1437 aa7.68□□□□□ -1.18
LSAMP-207ENST00000539563 CAMSAP2Q08AD1 1489 aa7.68□□□□□ -1.18
LSAMP-207ENST00000539563 BLOC1S2Q6QNY1 142 aa7.67□□□□□ -1.18
LSAMP-207ENST00000539563 CDK13Q14004 1512 aaKnown RBP7.67□□□□□ -1.18
LSAMP-207ENST00000539563 CBFA2T2O43439 604 aa7.67□□□□□ -1.18
LSAMP-207ENST00000539563 SOGA3Q5TF21 947 aa7.67□□□□□ -1.18
LSAMP-207ENST00000539563 MAGI1Q96QZ7 1491 aaPredicted RBP7.67□□□□□ -1.18
LSAMP-207ENST00000539563 TSR2Q969E8 191 aaKnown RBP7.67□□□□□ -1.18
LSAMP-207ENST00000539563 BCAR3O75815 825 aa7.67□□□□□ -1.18
LSAMP-207ENST00000539563 DDX54Q8TDD1 881 aaKnown RBP7.67□□□□□ -1.18
LSAMP-207ENST00000539563 WASF1Q92558 559 aa7.67□□□□□ -1.18
LSAMP-207ENST00000539563 STARD3NLO95772 234 aa7.67□□□□□ -1.18
LSAMP-207ENST00000539563 RPAP2Q8IXW5 612 aaPredicted RBP7.67□□□□□ -1.18
LSAMP-207ENST00000539563 TNMDQ9H2S6 317 aa7.67□□□□□ -1.18
LSAMP-207ENST00000539563 AKNAQ7Z591 1439 aa7.67□□□□□ -1.18
LSAMP-207ENST00000539563 HMGN5P82970 282 aaKnown RBP7.66□□□□□ -1.18
LSAMP-207ENST00000539563 PPFIBP1Q86W92 1011 aa7.66□□□□□ -1.18
LSAMP-207ENST00000539563 CIZ1Q9ULV3 898 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms