RNA–Protein interactions for RNA: ENST00000539534.5

LMO3-221, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-221ENST00000539534 ADAMTS2O95450 1211 aa16.68■□□□□ 0.26
LMO3-221ENST00000539534 MRS2Q9HD23 443 aa16.68■□□□□ 0.26
LMO3-221ENST00000539534 FLT4P35916 1363 aa16.67■□□□□ 0.26
LMO3-221ENST00000539534 AMPHP49418 695 aa16.67■□□□□ 0.26
LMO3-221ENST00000539534 CHRNA2Q15822 529 aa16.67■□□□□ 0.26
LMO3-221ENST00000539534 HSP90AB2PQ58FF8 381 aa16.67■□□□□ 0.26
LMO3-221ENST00000539534 ABCA3Q99758 1704 aa16.67■□□□□ 0.26
LMO3-221ENST00000539534 LTN1O94822 1766 aa16.66■□□□□ 0.26
LMO3-221ENST00000539534 FNBP4Q8N3X1 1017 aaPredicted RBP16.66■□□□□ 0.26
LMO3-221ENST00000539534 BLMP54132 1417 aaPredicted RBP16.65■□□□□ 0.26
LMO3-221ENST00000539534 PPM1GO15355 546 aaPredicted RBP16.65■□□□□ 0.26
LMO3-221ENST00000539534 NUDCQ9Y266 331 aa16.64■□□□□ 0.25
LMO3-221ENST00000539534 COL3A1P02461 1466 aaPredicted RBP16.63■□□□□ 0.25
LMO3-221ENST00000539534 IL13P35225 146 aa16.63■□□□□ 0.25
LMO3-221ENST00000539534 SLIT2O94813 1529 aa16.63■□□□□ 0.25
LMO3-221ENST00000539534 PEAK1Q9H792 1746 aa16.62■□□□□ 0.25
LMO3-221ENST00000539534 COL18A1P39060 1754 aa16.62■□□□□ 0.25
LMO3-221ENST00000539534 CCDC184Q52MB2 194 aa16.62■□□□□ 0.25
LMO3-221ENST00000539534 NGLY1Q96IV0 654 aa16.62■□□□□ 0.25
LMO3-221ENST00000539534 BTG4Q9NY30 223 aa16.62■□□□□ 0.25
LMO3-221ENST00000539534 CAMTA1Q9Y6Y1 1673 aa16.62■□□□□ 0.25
LMO3-221ENST00000539534 ZBTB7CA1YPR0 619 aa16.61■□□□□ 0.25
LMO3-221ENST00000539534 EIF4A2Q14240 407 aaKnown RBP16.61■□□□□ 0.25
LMO3-221ENST00000539534 PNISRQ8TF01 805 aaKnown RBP16.61■□□□□ 0.25
LMO3-221ENST00000539534 C8orf37Q96NL8 207 aa16.61■□□□□ 0.25
LMO3-221ENST00000539534 LMO7Q8WWI1 1683 aa16.61■□□□□ 0.25
LMO3-221ENST00000539534 FAM208AQ9UK61 1670 aaKnown RBP16.61■□□□□ 0.25
LMO3-221ENST00000539534 ERBB3P21860 1342 aa16.61■□□□□ 0.25
LMO3-221ENST00000539534 DIAPH1O60610 1272 aaKnown RBP16.6■□□□□ 0.25
LMO3-221ENST00000539534 ANKRD24Q8TF21 1146 aa16.6■□□□□ 0.25
LMO3-221ENST00000539534 PNNQ9H307 717 aaKnown RBP16.6■□□□□ 0.25
LMO3-221ENST00000539534 BCL9LQ86UU0 1499 aa16.6■□□□□ 0.25
LMO3-221ENST00000539534 COL14A1Q05707 1796 aaKnown RBP16.59■□□□□ 0.25
LMO3-221ENST00000539534 WDR43Q15061 677 aaKnown RBP eCLIP16.59■□□□□ 0.25
LMO3-221ENST00000539534 MEX3CQ5U5Q3 659 aaKnown RBP16.59■□□□□ 0.25
LMO3-221ENST00000539534 UNC5CLQ8IV45 518 aa16.59■□□□□ 0.25
LMO3-221ENST00000539534 PLEKHG2Q9H7P9 1386 aa16.59■□□□□ 0.25
LMO3-221ENST00000539534 COL5A2P05997 1499 aaPredicted RBP16.59■□□□□ 0.25
LMO3-221ENST00000539534 WDR17Q8IZU2 1322 aa16.58■□□□□ 0.24
LMO3-221ENST00000539534 EYA1Q99502 592 aa16.57■□□□□ 0.24
LMO3-221ENST00000539534 AFF2P51816 1311 aa16.56■□□□□ 0.24
LMO3-221ENST00000539534 EVA1CP58658 441 aa16.56■□□□□ 0.24
LMO3-221ENST00000539534 NBPF6Q5VWK0 638 aa16.56■□□□□ 0.24
LMO3-221ENST00000539534 LARP1Q6PKG0 1096 aaKnown RBP16.56■□□□□ 0.24
LMO3-221ENST00000539534 NGEFQ8N5V2 710 aa16.56■□□□□ 0.24
LMO3-221ENST00000539534 NBPF4Q96M43 638 aa16.56■□□□□ 0.24
LMO3-221ENST00000539534 RGPD1P0DJD0 1748 aa16.56■□□□□ 0.24
LMO3-221ENST00000539534 IGSF1Q8N6C5 1336 aa16.55■□□□□ 0.24
LMO3-221ENST00000539534 VPS72Q15906 364 aa16.55■□□□□ 0.24
LMO3-221ENST00000539534 LTV1Q96GA3 475 aaPredicted RBP16.55■□□□□ 0.24
LMO3-221ENST00000539534 CARD10Q9BWT7 1032 aa16.55■□□□□ 0.24
LMO3-221ENST00000539534 USP21Q9UK80 565 aa16.55■□□□□ 0.24
LMO3-221ENST00000539534 NCAPD2Q15021 1401 aa16.54■□□□□ 0.24
LMO3-221ENST00000539534 NCBP3Q53F19 620 aaKnown RBP16.54■□□□□ 0.24
LMO3-221ENST00000539534 CSB-PGBD3P0DP91 1061 aa16.53■□□□□ 0.24
LMO3-221ENST00000539534 STRN4Q9NRL3 753 aa16.53■□□□□ 0.24
LMO3-221ENST00000539534 NWD2Q9ULI1 1742 aa16.53■□□□□ 0.24
LMO3-221ENST00000539534 CRB1P82279 1406 aa16.53■□□□□ 0.24
LMO3-221ENST00000539534 KDRP35968 1356 aa16.52■□□□□ 0.24
LMO3-221ENST00000539534 SPATA31A5Q5VU36 1347 aa16.52■□□□□ 0.24
LMO3-221ENST00000539534 SPATA31A7Q8IWB4 1347 aa16.52■□□□□ 0.24
LMO3-221ENST00000539534 FCHSD2O94868 740 aa16.52■□□□□ 0.24
LMO3-221ENST00000539534 NLRP2Q9NX02 1062 aa16.52■□□□□ 0.24
LMO3-221ENST00000539534 SPATA31A1Q5TZJ5 1347 aa16.51■□□□□ 0.23
LMO3-221ENST00000539534 ZNF772Q68DY9 489 aaPredicted RBP16.51■□□□□ 0.23
LMO3-221ENST00000539534 TOM1L2Q6ZVM7 507 aa16.51■□□□□ 0.23
LMO3-221ENST00000539534 RGS17Q9UGC6 210 aaPredicted RBP16.51■□□□□ 0.23
LMO3-221ENST00000539534 ATRNO75882 1429 aa16.51■□□□□ 0.23
LMO3-221ENST00000539534 TRPC5Q9UL62 973 aaPredicted RBP16.5■□□□□ 0.23
LMO3-221ENST00000539534 ADAMTS8Q9UP79 889 aa16.5■□□□□ 0.23
LMO3-221ENST00000539534 THRAP3Q9Y2W1 955 aaKnown RBP16.5■□□□□ 0.23
LMO3-221ENST00000539534 U2SURPO15042 1029 aaKnown RBP16.49■□□□□ 0.23
LMO3-221ENST00000539534 NEFMP07197 916 aa16.49■□□□□ 0.23
LMO3-221ENST00000539534 U2AF1L5P0DN76 240 aaPredicted RBP16.49■□□□□ 0.23
LMO3-221ENST00000539534 U2AF1Q01081 240 aaKnown RBP eCLIP16.49■□□□□ 0.23
LMO3-221ENST00000539534 SULT6B1Q6IMI4 303 aa16.49■□□□□ 0.23
LMO3-221ENST00000539534 NRAPQ86VF7 1730 aa16.49■□□□□ 0.23
LMO3-221ENST00000539534 FAM9BQ8IZU0 186 aa16.49■□□□□ 0.23
LMO3-221ENST00000539534 QTRT2Q9H974 415 aaKnown RBP16.49■□□□□ 0.23
LMO3-221ENST00000539534 PLCH1Q4KWH8 1693 aa16.49■□□□□ 0.23
LMO3-221ENST00000539534 ONECUT3O60422 494 aaPredicted RBP16.48■□□□□ 0.23
LMO3-221ENST00000539534 BARGINQ6ZT62 677 aa16.48■□□□□ 0.23
LMO3-221ENST00000539534 AEBP1Q8IUX7 1158 aa16.48■□□□□ 0.23
LMO3-221ENST00000539534 TCP11L2Q8N4U5 519 aa16.48■□□□□ 0.23
LMO3-221ENST00000539534 GJD4Q96KN9 370 aaPredicted RBP16.48■□□□□ 0.23
LMO3-221ENST00000539534 RSPH6AQ9H0K4 717 aa16.48■□□□□ 0.23
LMO3-221ENST00000539534 RGPD5Q99666 1765 aa16.47■□□□□ 0.23
LMO3-221ENST00000539534 USHBP1Q8N6Y0 703 aa16.47■□□□□ 0.23
LMO3-221ENST00000539534 PLEKHF1Q96S99 279 aa16.47■□□□□ 0.23
LMO3-221ENST00000539534 RUNDC1Q96C34 613 aa16.46■□□□□ 0.23
LMO3-221ENST00000539534 HMOX1P09601 288 aa16.45■□□□□ 0.22
LMO3-221ENST00000539534 CDCA7Q9BWT1 371 aaPredicted RBP16.45■□□□□ 0.22
LMO3-221ENST00000539534 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.45■□□□□ 0.22
LMO3-221ENST00000539534 DISP2A7MBM2 1401 aa16.45■□□□□ 0.22
LMO3-221ENST00000539534 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.44■□□□□ 0.22
LMO3-221ENST00000539534 MAPK8IP3Q9UPT6 1336 aa16.44■□□□□ 0.22
LMO3-221ENST00000539534 IL2RBP14784 551 aa16.43■□□□□ 0.22
LMO3-221ENST00000539534 USP35Q9P2H5 1018 aa16.43■□□□□ 0.22
LMO3-221ENST00000539534 PRKAR2BP31323 418 aa16.42■□□□□ 0.22
LMO3-221ENST00000539534 RBM6P78332 1123 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms