RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 MEIOBQ8N635 442 aa12.97□□□□□ -0.33
CCDC7-209ENST00000539197 IRF7Q92985 503 aa12.97□□□□□ -0.33
CCDC7-209ENST00000539197 STK17AQ9UEE5 414 aa12.97□□□□□ -0.33
CCDC7-209ENST00000539197 GMPRP36959 345 aa12.96□□□□□ -0.33
CCDC7-209ENST00000539197 CCDC116Q8IYX3 515 aa12.96□□□□□ -0.33
CCDC7-209ENST00000539197 LINC00528Q8N1L1 170 aa12.96□□□□□ -0.33
CCDC7-209ENST00000539197 H3BM21 787 aa12.95□□□□□ -0.34
CCDC7-209ENST00000539197 USP17L8P0C7I0 530 aa12.95□□□□□ -0.34
CCDC7-209ENST00000539197 BMP2P12643 396 aa12.95□□□□□ -0.34
CCDC7-209ENST00000539197 RFC5P40937 340 aa12.95□□□□□ -0.34
CCDC7-209ENST00000539197 EMILIN1Q9Y6C2 1016 aa12.95□□□□□ -0.34
CCDC7-209ENST00000539197 ZC3H4Q9UPT8 1303 aaKnown RBP12.94□□□□□ -0.34
CCDC7-209ENST00000539197 CBLBQ13191 982 aa12.93□□□□□ -0.34
CCDC7-209ENST00000539197 PPP1R26Q5T8A7 1209 aaPredicted RBP12.93□□□□□ -0.34
CCDC7-209ENST00000539197 ZBTB33Q86T24 672 aa12.93□□□□□ -0.34
CCDC7-209ENST00000539197 IL27Q8NEV9 243 aa12.93□□□□□ -0.34
CCDC7-209ENST00000539197 MAN1A2O60476 641 aa12.92□□□□□ -0.34
CCDC7-209ENST00000539197 NEUROD2Q15784 382 aa12.92□□□□□ -0.34
CCDC7-209ENST00000539197 KCTD15Q96SI1 283 aaPredicted RBP12.92□□□□□ -0.34
CCDC7-209ENST00000539197 SLC10A4Q96EP9 437 aa12.91□□□□□ -0.34
CCDC7-209ENST00000539197 CDV3Q9UKY7 258 aaKnown RBP12.91□□□□□ -0.34
CCDC7-209ENST00000539197 ADAM32Q8TC27 787 aa12.9□□□□□ -0.34
CCDC7-209ENST00000539197 DNMT3LQ9UJW3 386 aa12.9□□□□□ -0.34
CCDC7-209ENST00000539197 PTK2Q05397 1052 aa12.89□□□□□ -0.35
CCDC7-209ENST00000539197 PNMA1Q8ND90 353 aa12.89□□□□□ -0.35
CCDC7-209ENST00000539197 TSEN34Q9BSV6 310 aaKnown RBP12.89□□□□□ -0.35
CCDC7-209ENST00000539197 PGPEP1Q9NXJ5 209 aa12.89□□□□□ -0.35
CCDC7-209ENST00000539197 SOS2Q07890 1332 aaPredicted RBP12.88□□□□□ -0.35
CCDC7-209ENST00000539197 GPSM3Q9Y4H4 160 aa12.88□□□□□ -0.35
CCDC7-209ENST00000539197 INTS6LQ5JSJ4 861 aaKnown RBP12.87□□□□□ -0.35
CCDC7-209ENST00000539197 TRIM34Q9BYJ4 488 aa12.87□□□□□ -0.35
CCDC7-209ENST00000539197 LORP23490 312 aaPredicted RBP12.86□□□□□ -0.35
CCDC7-209ENST00000539197 RAB15P59190 212 aa12.85□□□□□ -0.35
CCDC7-209ENST00000539197 Q6ZVU0 165 aa12.85□□□□□ -0.35
CCDC7-209ENST00000539197 PCMTD1Q96MG8 357 aaPredicted RBP12.85□□□□□ -0.35
CCDC7-209ENST00000539197 DHX9Q08211 1270 aaKnown RBP12.84□□□□□ -0.35
CCDC7-209ENST00000539197 AGBL1Q96MI9 1066 aa12.84□□□□□ -0.35
CCDC7-209ENST00000539197 TMPRSS4Q9NRS4 437 aa12.84□□□□□ -0.35
CCDC7-209ENST00000539197 FIGNL2A6NMB9 653 aa12.83□□□□□ -0.36
CCDC7-209ENST00000539197 BRPF1P55201 1214 aaPredicted RBP12.83□□□□□ -0.36
CCDC7-209ENST00000539197 GOPCQ9HD26 462 aa12.83□□□□□ -0.36
CCDC7-209ENST00000539197 FAM181BA6NEQ2 426 aa12.81□□□□□ -0.36
CCDC7-209ENST00000539197 PPFIA3O75145 1194 aa12.81□□□□□ -0.36
CCDC7-209ENST00000539197 TTLL8A6PVC2 850 aa12.8□□□□□ -0.36
CCDC7-209ENST00000539197 ZSCAN1Q8NBB4 408 aa12.8□□□□□ -0.36
CCDC7-209ENST00000539197 VSIG8P0DPA2 414 aa12.79□□□□□ -0.36
CCDC7-209ENST00000539197 RELBQ01201 579 aa12.79□□□□□ -0.36
CCDC7-209ENST00000539197 NBPF20Q3BBV1 942 aa12.79□□□□□ -0.36
CCDC7-209ENST00000539197 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.78□□□□□ -0.36
CCDC7-209ENST00000539197 DZIP3Q86Y13 1208 aaKnown RBP12.78□□□□□ -0.36
CCDC7-209ENST00000539197 GJD4Q96KN9 370 aaPredicted RBP12.78□□□□□ -0.36
CCDC7-209ENST00000539197 SPINT1O43278 529 aa12.77□□□□□ -0.37
CCDC7-209ENST00000539197 TMEM259Q4ZIN3 620 aa12.77□□□□□ -0.37
CCDC7-209ENST00000539197 ZNF784Q8NCA9 323 aaPredicted RBP12.77□□□□□ -0.37
CCDC7-209ENST00000539197 ERVH48-1M5A8F1 160 aa12.76□□□□□ -0.37
CCDC7-209ENST00000539197 ADD1P35611 737 aaKnown RBP12.76□□□□□ -0.37
CCDC7-209ENST00000539197 CTSOP43234 321 aaPredicted RBP12.76□□□□□ -0.37
CCDC7-209ENST00000539197 INSM2Q96T92 566 aaPredicted RBP12.76□□□□□ -0.37
CCDC7-209ENST00000539197 PTSQ03393 145 aa12.75□□□□□ -0.37
CCDC7-209ENST00000539197 ZNF395Q9H8N7 513 aaPredicted RBP12.75□□□□□ -0.37
CCDC7-209ENST00000539197 LILRA1O75019 489 aa12.73□□□□□ -0.37
CCDC7-209ENST00000539197 ESPNB1AK53 854 aa12.72□□□□□ -0.37
CCDC7-209ENST00000539197 GPR161Q8N6U8 529 aaKnown RBP12.72□□□□□ -0.37
CCDC7-209ENST00000539197 KDF1Q8NAX2 398 aaPredicted RBP12.72□□□□□ -0.37
CCDC7-209ENST00000539197 FBXO45P0C2W1 286 aa12.71□□□□□ -0.37
CCDC7-209ENST00000539197 TPRNQ4KMQ1 711 aa12.7□□□□□ -0.38
CCDC7-209ENST00000539197 GIGYF1O75420 1035 aaPredicted RBP12.69□□□□□ -0.38
CCDC7-209ENST00000539197 POLMQ9NP87 494 aaPredicted RBP12.69□□□□□ -0.38
CCDC7-209ENST00000539197 CYLDQ9NQC7 956 aa12.69□□□□□ -0.38
CCDC7-209ENST00000539197 ZBBXA8MT70 800 aa12.68□□□□□ -0.38
CCDC7-209ENST00000539197 PCDHB9Q9Y5E1 797 aa12.68□□□□□ -0.38
CCDC7-209ENST00000539197 GPR37L1O60883 481 aa12.67□□□□□ -0.38
CCDC7-209ENST00000539197 ADH1AP07327 375 aa12.67□□□□□ -0.38
CCDC7-209ENST00000539197 CCDC155Q8N6L0 562 aa12.67□□□□□ -0.38
CCDC7-209ENST00000539197 KRT76Q01546 638 aa12.66□□□□□ -0.38
CCDC7-209ENST00000539197 RNF217Q8TC41 542 aa12.66□□□□□ -0.38
CCDC7-209ENST00000539197 TRIM52Q96A61 297 aa12.66□□□□□ -0.38
CCDC7-209ENST00000539197 FOXD4L5Q5VV16 416 aaPredicted RBP12.65□□□□□ -0.38
CCDC7-209ENST00000539197 SEPT12Q8IYM1 358 aa12.65□□□□□ -0.38
CCDC7-209ENST00000539197 MTMR14Q8NCE2 650 aa12.65□□□□□ -0.38
CCDC7-209ENST00000539197 SNRKQ9NRH2 765 aa12.65□□□□□ -0.38
CCDC7-209ENST00000539197 SLC35F4A4IF30 521 aa12.64□□□□□ -0.39
CCDC7-209ENST00000539197 PTGIRP43119 386 aa12.63□□□□□ -0.39
CCDC7-209ENST00000539197 SENP3-EIF4A1A0A087X0R7 540 aa12.61□□□□□ -0.39
CCDC7-209ENST00000539197 NANOS1Q8WY41 292 aaKnown RBP12.6□□□□□ -0.39
CCDC7-209ENST00000539197 CNTNAP3BQ96NU0 1288 aa12.6□□□□□ -0.39
CCDC7-209ENST00000539197 CNTNAP3Q9BZ76 1288 aa12.6□□□□□ -0.39
CCDC7-209ENST00000539197 RNFT1Q5M7Z0 435 aa12.59□□□□□ -0.39
CCDC7-209ENST00000539197 ITGA6P23229 1130 aa12.58□□□□□ -0.4
CCDC7-209ENST00000539197 NR1H3Q13133 447 aa12.58□□□□□ -0.4
CCDC7-209ENST00000539197 VWA5B2Q8N398 1253 aa12.58□□□□□ -0.4
CCDC7-209ENST00000539197 BANK1Q8NDB2 785 aa12.58□□□□□ -0.4
CCDC7-209ENST00000539197 CCDC125Q86Z20 511 aa12.57□□□□□ -0.4
CCDC7-209ENST00000539197 COL25A1Q9BXS0 654 aaPredicted RBP12.57□□□□□ -0.4
CCDC7-209ENST00000539197 CDC14CA4D256 554 aa12.56□□□□□ -0.4
CCDC7-209ENST00000539197 SCTRP47872 440 aa12.56□□□□□ -0.4
CCDC7-209ENST00000539197 PRICKLE2Q7Z3G6 844 aa12.55□□□□□ -0.4
CCDC7-209ENST00000539197 CUEDC1Q9NWM3 386 aaPredicted RBP12.55□□□□□ -0.4
CCDC7-209ENST00000539197 ATP5J2-PTCD1G3V325 749 aa12.54□□□□□ -0.4
CCDC7-209ENST00000539197 RHOQP17081 205 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms