RNA–Protein interactions for RNA: ENST00000539191.1

NPIPB4-210, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 305 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-210ENST00000539191 PROM2Q8N271 834 aa11.92□□□□□ -0.5
NPIPB4-210ENST00000539191 OVOS2A0A0G2JMS6 1433 aa11.92□□□□□ -0.5
NPIPB4-210ENST00000539191 OVOS2A0A0J9YW53 1432 aa11.92□□□□□ -0.5
NPIPB4-210ENST00000539191 OVOS2Q6IE36 1432 aa11.92□□□□□ -0.5
NPIPB4-210ENST00000539191 DDB1Q16531 1140 aa11.91□□□□□ -0.5
NPIPB4-210ENST00000539191 PPP1R1BQ9UD71 204 aaPredicted RBP11.91□□□□□ -0.5
NPIPB4-210ENST00000539191 CPSF1Q10570 1443 aaKnown RBP11.91□□□□□ -0.5
NPIPB4-210ENST00000539191 MON2Q7Z3U7 1717 aa11.91□□□□□ -0.5
NPIPB4-210ENST00000539191 PARD3Q8TEW0 1356 aa11.91□□□□□ -0.5
NPIPB4-210ENST00000539191 NFAT5O94916 1531 aa11.91□□□□□ -0.5
NPIPB4-210ENST00000539191 RGPD3A6NKT7 1758 aaPredicted RBP11.9□□□□□ -0.5
NPIPB4-210ENST00000539191 RGPD4Q7Z3J3 1758 aa11.9□□□□□ -0.5
NPIPB4-210ENST00000539191 KCNQ2O43526 872 aa11.9□□□□□ -0.5
NPIPB4-210ENST00000539191 YY1P25490 414 aa11.9□□□□□ -0.5
NPIPB4-210ENST00000539191 NBPF14Q5TI25 921 aa11.9□□□□□ -0.5
NPIPB4-210ENST00000539191 ATF5Q9Y2D1 282 aaPredicted RBP11.9□□□□□ -0.5
NPIPB4-210ENST00000539191 AATKQ6ZMQ8 1374 aa11.9□□□□□ -0.5
NPIPB4-210ENST00000539191 TTC21BQ7Z4L5 1316 aa11.89□□□□□ -0.51
NPIPB4-210ENST00000539191 CSB-PGBD3P0DP91 1061 aa11.89□□□□□ -0.51
NPIPB4-210ENST00000539191 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.89□□□□□ -0.51
NPIPB4-210ENST00000539191 ACSBG1Q96GR2 724 aa11.89□□□□□ -0.51
NPIPB4-210ENST00000539191 STAC3Q96MF2 364 aa11.89□□□□□ -0.51
NPIPB4-210ENST00000539191 WDR17Q8IZU2 1322 aa11.88□□□□□ -0.51
NPIPB4-210ENST00000539191 RGPD2P0DJD1 1756 aa11.88□□□□□ -0.51
NPIPB4-210ENST00000539191 BCL11BQ9C0K0 894 aaPredicted RBP11.88□□□□□ -0.51
NPIPB4-210ENST00000539191 SPON1Q9HCB6 807 aa11.88□□□□□ -0.51
NPIPB4-210ENST00000539191 THRAP3Q9Y2W1 955 aaKnown RBP11.88□□□□□ -0.51
NPIPB4-210ENST00000539191 BTAF1O14981 1849 aa11.88□□□□□ -0.51
NPIPB4-210ENST00000539191 ARHGEF25Q86VW2 580 aa11.87□□□□□ -0.51
NPIPB4-210ENST00000539191 NME9Q86XW9 330 aa11.87□□□□□ -0.51
NPIPB4-210ENST00000539191 ROCK2O75116 1388 aaKnown RBP11.87□□□□□ -0.51
NPIPB4-210ENST00000539191 NHSQ6T4R5 1651 aa11.86□□□□□ -0.51
NPIPB4-210ENST00000539191 EVC2Q86UK5 1308 aa11.86□□□□□ -0.51
NPIPB4-210ENST00000539191 CD163L1Q9NR16 1453 aa11.85□□□□□ -0.51
NPIPB4-210ENST00000539191 KTN1Q86UP2 1357 aaKnown RBP11.85□□□□□ -0.51
NPIPB4-210ENST00000539191 TXNRD1Q16881 649 aa11.85□□□□□ -0.51
NPIPB4-210ENST00000539191 TUBGCP6Q96RT7 1819 aa11.85□□□□□ -0.51
NPIPB4-210ENST00000539191 FBLN1P23142 703 aa11.84□□□□□ -0.51
NPIPB4-210ENST00000539191 PTGER2P43116 358 aa11.84□□□□□ -0.51
NPIPB4-210ENST00000539191 KCNQ4P56696 695 aa11.84□□□□□ -0.51
NPIPB4-210ENST00000539191 TNS2Q63HR2 1409 aa11.83□□□□□ -0.52
NPIPB4-210ENST00000539191 PAPPAQ13219 1627 aa11.82□□□□□ -0.52
NPIPB4-210ENST00000539191 PLSCR1O15162 318 aa11.82□□□□□ -0.52
NPIPB4-210ENST00000539191 TMC1Q8TDI8 760 aa11.82□□□□□ -0.52
NPIPB4-210ENST00000539191 LTV1Q96GA3 475 aaPredicted RBP11.82□□□□□ -0.52
NPIPB4-210ENST00000539191 CARD10Q9BWT7 1032 aa11.82□□□□□ -0.52
NPIPB4-210ENST00000539191 NLRP2Q9NX02 1062 aa11.82□□□□□ -0.52
NPIPB4-210ENST00000539191 SBNO2Q9Y2G9 1366 aa11.81□□□□□ -0.52
NPIPB4-210ENST00000539191 ZNF827Q17R98 1081 aa11.81□□□□□ -0.52
NPIPB4-210ENST00000539191 FHDC1Q9C0D6 1143 aaPredicted RBP11.81□□□□□ -0.52
NPIPB4-210ENST00000539191 SLC12A5Q9H2X9 1139 aa11.81□□□□□ -0.52
NPIPB4-210ENST00000539191 USP54Q70EL1 1684 aa11.81□□□□□ -0.52
NPIPB4-210ENST00000539191 NINLQ9Y2I6 1382 aa11.8□□□□□ -0.52
NPIPB4-210ENST00000539191 DOT1LQ8TEK3 1739 aa11.8□□□□□ -0.52
NPIPB4-210ENST00000539191 SHANK3Q9BYB0 1731 aa11.8□□□□□ -0.52
NPIPB4-210ENST00000539191 EXOC5O00471 708 aa11.8□□□□□ -0.52
NPIPB4-210ENST00000539191 SLC15A2Q16348 729 aa11.8□□□□□ -0.52
NPIPB4-210ENST00000539191 STK32BQ9NY57 414 aa11.8□□□□□ -0.52
NPIPB4-210ENST00000539191 ABCC6O95255 1503 aa11.8□□□□□ -0.52
NPIPB4-210ENST00000539191 CHD4Q14839 1912 aa11.8□□□□□ -0.52
NPIPB4-210ENST00000539191 BRD4O60885 1362 aaPredicted RBP11.79□□□□□ -0.52
NPIPB4-210ENST00000539191 KLHL34Q8N239 644 aa11.79□□□□□ -0.52
NPIPB4-210ENST00000539191 KCNH5Q8NCM2 988 aa11.79□□□□□ -0.52
NPIPB4-210ENST00000539191 LRRC4BQ9NT99 713 aa11.79□□□□□ -0.52
NPIPB4-210ENST00000539191 ERBB3P21860 1342 aa11.79□□□□□ -0.52
NPIPB4-210ENST00000539191 ANKRD24Q8TF21 1146 aa11.78□□□□□ -0.52
NPIPB4-210ENST00000539191 TTC21AQ8NDW8 1320 aa11.78□□□□□ -0.52
NPIPB4-210ENST00000539191 A0A1W2PP64 1363 aa11.78□□□□□ -0.52
NPIPB4-210ENST00000539191 DDX54Q8TDD1 881 aaKnown RBP11.77□□□□□ -0.53
NPIPB4-210ENST00000539191 SYT17Q9BSW7 474 aa11.77□□□□□ -0.53
NPIPB4-210ENST00000539191 FAM208AQ9UK61 1670 aaKnown RBP11.77□□□□□ -0.53
NPIPB4-210ENST00000539191 CCDC7Q96M83 1385 aa11.77□□□□□ -0.53
NPIPB4-210ENST00000539191 SGIP1Q9BQI5 828 aa11.76□□□□□ -0.53
NPIPB4-210ENST00000539191 ZNF692Q9BU19 519 aaPredicted RBP11.76□□□□□ -0.53
NPIPB4-210ENST00000539191 CARD11Q9BXL7 1154 aa11.76□□□□□ -0.53
NPIPB4-210ENST00000539191 BCL9O00512 1426 aa11.76□□□□□ -0.53
NPIPB4-210ENST00000539191 IL2RBP14784 551 aa11.75□□□□□ -0.53
NPIPB4-210ENST00000539191 ZNF784Q8NCA9 323 aaPredicted RBP11.75□□□□□ -0.53
NPIPB4-210ENST00000539191 SYTL4Q96C24 671 aaPredicted RBP11.75□□□□□ -0.53
NPIPB4-210ENST00000539191 CDCA7Q9BWT1 371 aaPredicted RBP11.75□□□□□ -0.53
NPIPB4-210ENST00000539191 USP31Q70CQ4 1352 aa11.75□□□□□ -0.53
NPIPB4-210ENST00000539191 USHBP1Q8N6Y0 703 aa11.74□□□□□ -0.53
NPIPB4-210ENST00000539191 DCAF8L1A6NGE4 600 aa11.73□□□□□ -0.53
NPIPB4-210ENST00000539191 LY75O60449 1722 aa11.73□□□□□ -0.53
NPIPB4-210ENST00000539191 MEGF6O75095 1541 aa11.73□□□□□ -0.53
NPIPB4-210ENST00000539191 PELP1Q8IZL8 1130 aaKnown RBP11.73□□□□□ -0.53
NPIPB4-210ENST00000539191 MTFR1LQ9H019 292 aa11.73□□□□□ -0.53
NPIPB4-210ENST00000539191 C11orf95C9JLR9 678 aaPredicted RBP11.72□□□□□ -0.53
NPIPB4-210ENST00000539191 ARXQ96QS3 562 aa11.72□□□□□ -0.53
NPIPB4-210ENST00000539191 EDC4Q6P2E9 1401 aaKnown RBP11.71□□□□□ -0.53
NPIPB4-210ENST00000539191 MAP3K19Q56UN5 1328 aa11.71□□□□□ -0.53
NPIPB4-210ENST00000539191 PRIM1P49642 420 aaKnown RBP11.71□□□□□ -0.53
NPIPB4-210ENST00000539191 RRS1Q15050 365 aaKnown RBP11.71□□□□□ -0.53
NPIPB4-210ENST00000539191 SMIM5Q71RC9 77 aa11.71□□□□□ -0.53
NPIPB4-210ENST00000539191 HDGFL2Q7Z4V5 671 aaPredicted RBP11.71□□□□□ -0.53
NPIPB4-210ENST00000539191 NLGN2Q8NFZ4 835 aa11.71□□□□□ -0.53
NPIPB4-210ENST00000539191 QSER1Q2KHR3 1735 aa11.71□□□□□ -0.54
NPIPB4-210ENST00000539191 CEP350Q5VT06 3117 aa11.71□□□□□ -0.54
NPIPB4-210ENST00000539191 NSD2O96028 1365 aa11.7□□□□□ -0.54
NPIPB4-210ENST00000539191 PNPLA7Q6ZV29 1317 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms