RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 TTLL12Q14166 644 aaPredicted RBP5.78□□□□□ -1.48
CBX3P4-201ENST00000538909 PPP1R26Q5T8A7 1209 aaPredicted RBP5.78□□□□□ -1.48
CBX3P4-201ENST00000538909 GALNT6Q8NCL4 622 aa5.78□□□□□ -1.48
CBX3P4-201ENST00000538909 DCAF5Q96JK2 942 aa5.78□□□□□ -1.48
CBX3P4-201ENST00000538909 AGBL1Q96MI9 1066 aa5.78□□□□□ -1.48
CBX3P4-201ENST00000538909 C1QTNF2Q9BXJ5 285 aa5.78□□□□□ -1.48
CBX3P4-201ENST00000538909 CARD14Q9BXL6 1004 aa5.78□□□□□ -1.48
CBX3P4-201ENST00000538909 CNTNAP5Q8WYK1 1306 aa5.77□□□□□ -1.49
CBX3P4-201ENST00000538909 TULP1O00294 542 aaPredicted RBP5.77□□□□□ -1.49
CBX3P4-201ENST00000538909 CELA2BP08218 269 aaPredicted RBP5.77□□□□□ -1.49
CBX3P4-201ENST00000538909 CSPP1Q1MSJ5 1256 aa5.77□□□□□ -1.49
CBX3P4-201ENST00000538909 RSBN1LQ6PCB5 846 aaPredicted RBP5.77□□□□□ -1.49
CBX3P4-201ENST00000538909 KRTAP1-3Q8IUG1 177 aa5.77□□□□□ -1.49
CBX3P4-201ENST00000538909 CABLES1Q8TDN4 633 aa5.77□□□□□ -1.49
CBX3P4-201ENST00000538909 PSMG3-AS1Q96PY0 264 aa5.77□□□□□ -1.49
CBX3P4-201ENST00000538909 MAP4K5Q9Y4K4 846 aa5.77□□□□□ -1.49
CBX3P4-201ENST00000538909 ITGB2P05107 769 aa5.76□□□□□ -1.49
CBX3P4-201ENST00000538909 HRCP23327 699 aa5.76□□□□□ -1.49
CBX3P4-201ENST00000538909 RELBQ01201 579 aa5.76□□□□□ -1.49
CBX3P4-201ENST00000538909 INSM2Q96T92 566 aaPredicted RBP5.76□□□□□ -1.49
CBX3P4-201ENST00000538909 BEGAINQ9BUH8 593 aa5.76□□□□□ -1.49
CBX3P4-201ENST00000538909 TBC1D2Q9BYX2 928 aa5.76□□□□□ -1.49
CBX3P4-201ENST00000538909 POLMQ9NP87 494 aaPredicted RBP5.76□□□□□ -1.49
CBX3P4-201ENST00000538909 PGPEP1Q9NXJ5 209 aa5.76□□□□□ -1.49
CBX3P4-201ENST00000538909 PHF20L1A8MW92 1017 aa5.75□□□□□ -1.49
CBX3P4-201ENST00000538909 SRSF11Q05519 484 aaKnown RBP5.75□□□□□ -1.49
CBX3P4-201ENST00000538909 Q6ZVU0 165 aa5.75□□□□□ -1.49
CBX3P4-201ENST00000538909 ZBTB3Q9H5J0 574 aa5.75□□□□□ -1.49
CBX3P4-201ENST00000538909 PROCP04070 461 aa5.74□□□□□ -1.49
CBX3P4-201ENST00000538909 GAS6Q14393 721 aa5.74□□□□□ -1.49
CBX3P4-201ENST00000538909 NBPF14Q5TI25 921 aa5.74□□□□□ -1.49
CBX3P4-201ENST00000538909 GIGYF2Q6Y7W6 1299 aaKnown RBP5.74□□□□□ -1.49
CBX3P4-201ENST00000538909 SH3BP5LQ7L8J4 393 aa5.74□□□□□ -1.49
CBX3P4-201ENST00000538909 TRMT44Q8IYL2 757 aaKnown RBP5.74□□□□□ -1.49
CBX3P4-201ENST00000538909 ARMC2Q8NEN0 867 aa5.74□□□□□ -1.49
CBX3P4-201ENST00000538909 ENAMQ9NRM1 1142 aa5.74□□□□□ -1.49
CBX3P4-201ENST00000538909 SENP3-EIF4A1A0A087X0R7 540 aa5.73□□□□□ -1.49
CBX3P4-201ENST00000538909 K7ELQ4 463 aaPredicted RBP5.73□□□□□ -1.49
CBX3P4-201ENST00000538909 NEDD1Q8NHV4 660 aa5.73□□□□□ -1.49
CBX3P4-201ENST00000538909 ZNF395Q9H8N7 513 aaPredicted RBP5.73□□□□□ -1.49
CBX3P4-201ENST00000538909 CUEDC1Q9NWM3 386 aaPredicted RBP5.73□□□□□ -1.49
CBX3P4-201ENST00000538909 ERFEQ4G0M1 354 aa5.72□□□□□ -1.49
CBX3P4-201ENST00000538909 PODNQ7Z5L7 613 aa5.72□□□□□ -1.49
CBX3P4-201ENST00000538909 Q8N3U1 123 aa5.72□□□□□ -1.49
CBX3P4-201ENST00000538909 RNF217Q8TC41 542 aa5.72□□□□□ -1.49
CBX3P4-201ENST00000538909 GJA5P36382 358 aa5.71□□□□□ -1.5
CBX3P4-201ENST00000538909 RIC3Q7Z5B4 369 aa5.71□□□□□ -1.5
CBX3P4-201ENST00000538909 BEND7Q8N7W2 519 aaPredicted RBP5.71□□□□□ -1.5
CBX3P4-201ENST00000538909 NUTM2BA6NNL0 878 aaPredicted RBP5.7□□□□□ -1.5
CBX3P4-201ENST00000538909 NUTM2EB1AL46 878 aaPredicted RBP5.7□□□□□ -1.5
CBX3P4-201ENST00000538909 GPR25O00155 361 aa5.7□□□□□ -1.5
CBX3P4-201ENST00000538909 NUTM2DQ5VT03 806 aaPredicted RBP5.7□□□□□ -1.5
CBX3P4-201ENST00000538909 NUTM2AQ8IVF1 878 aaPredicted RBP5.7□□□□□ -1.5
CBX3P4-201ENST00000538909 KCTD15Q96SI1 283 aaPredicted RBP5.7□□□□□ -1.5
CBX3P4-201ENST00000538909 IGF1RP08069 1367 aa5.69□□□□□ -1.5
CBX3P4-201ENST00000538909 DIXDC1Q155Q3 683 aa5.69□□□□□ -1.5
CBX3P4-201ENST00000538909 PRPF38BQ5VTL8 546 aaKnown RBP5.69□□□□□ -1.5
CBX3P4-201ENST00000538909 FURINP09958 794 aa5.68□□□□□ -1.5
CBX3P4-201ENST00000538909 BCRP11274 1271 aa5.68□□□□□ -1.5
CBX3P4-201ENST00000538909 RHOQP17081 205 aa5.68□□□□□ -1.5
CBX3P4-201ENST00000538909 BAG6P46379 1132 aa5.68□□□□□ -1.5
CBX3P4-201ENST00000538909 QPCTQ16769 361 aa5.68□□□□□ -1.5
CBX3P4-201ENST00000538909 FOXD4L5Q5VV16 416 aaPredicted RBP5.68□□□□□ -1.5
CBX3P4-201ENST00000538909 SLC10A4Q96EP9 437 aa5.68□□□□□ -1.5
CBX3P4-201ENST00000538909 MBIPQ9NS73 344 aa5.68□□□□□ -1.5
CBX3P4-201ENST00000538909 RAB15P59190 212 aa5.67□□□□□ -1.5
CBX3P4-201ENST00000538909 DHX9Q08211 1270 aaKnown RBP5.67□□□□□ -1.5
CBX3P4-201ENST00000538909 INTS6LQ5JSJ4 861 aaKnown RBP5.67□□□□□ -1.5
CBX3P4-201ENST00000538909 AMHR2Q16671 573 aa5.66□□□□□ -1.5
CBX3P4-201ENST00000538909 RIPOR1Q6ZS17 1223 aa5.66□□□□□ -1.5
CBX3P4-201ENST00000538909 LYSMD3Q7Z3D4 306 aa5.66□□□□□ -1.5
CBX3P4-201ENST00000538909 PRICKLE2Q7Z3G6 844 aa5.66□□□□□ -1.5
CBX3P4-201ENST00000538909 ACDQ96AP0 544 aa5.66□□□□□ -1.5
CBX3P4-201ENST00000538909 ZNF837Q96EG3 531 aaPredicted RBP5.66□□□□□ -1.5
CBX3P4-201ENST00000538909 ARHGAP9Q9BRR9 750 aa5.66□□□□□ -1.5
CBX3P4-201ENST00000538909 TMPRSS4Q9NRS4 437 aa5.66□□□□□ -1.5
CBX3P4-201ENST00000538909 LIMD1Q9UGP4 676 aa5.66□□□□□ -1.5
CBX3P4-201ENST00000538909 KRBA1A5PL33 1030 aa5.65□□□□□ -1.5
CBX3P4-201ENST00000538909 FOXR1Q6PIV2 292 aa5.65□□□□□ -1.5
CBX3P4-201ENST00000538909 HELBQ8NG08 1087 aaPredicted RBP5.65□□□□□ -1.5
CBX3P4-201ENST00000538909 ADH1AP07327 375 aa5.64□□□□□ -1.51
CBX3P4-201ENST00000538909 PLCB2Q00722 1185 aa5.64□□□□□ -1.51
CBX3P4-201ENST00000538909 ZBTB33Q86T24 672 aa5.64□□□□□ -1.51
CBX3P4-201ENST00000538909 GPKOWQ92917 476 aaPredicted RBP eCLIP5.64□□□□□ -1.51
CBX3P4-201ENST00000538909 GTPBP3Q969Y2 492 aaKnown RBP5.64□□□□□ -1.51
CBX3P4-201ENST00000538909 PTGIRP43119 386 aa5.63□□□□□ -1.51
CBX3P4-201ENST00000538909 SNRPNP63162 240 aaKnown RBP5.63□□□□□ -1.51
CBX3P4-201ENST00000538909 DBN1Q16643 649 aa5.63□□□□□ -1.51
CBX3P4-201ENST00000538909 RTL5Q5HYW3 569 aaPredicted RBP5.63□□□□□ -1.51
CBX3P4-201ENST00000538909 LCE3BQ5TA77 95 aa5.63□□□□□ -1.51
CBX3P4-201ENST00000538909 PARP9Q8IXQ6 854 aa5.63□□□□□ -1.51
CBX3P4-201ENST00000538909 TRIM22Q8IYM9 498 aa5.63□□□□□ -1.51
CBX3P4-201ENST00000538909 ZNF784Q8NCA9 323 aaPredicted RBP5.63□□□□□ -1.51
CBX3P4-201ENST00000538909 CDV3Q9UKY7 258 aaKnown RBP5.63□□□□□ -1.51
CBX3P4-201ENST00000538909 LILRB3O75022 631 aa5.62□□□□□ -1.51
CBX3P4-201ENST00000538909 ADD1P35611 737 aaKnown RBP5.62□□□□□ -1.51
CBX3P4-201ENST00000538909 KDM2AQ9Y2K7 1162 aa5.62□□□□□ -1.51
CBX3P4-201ENST00000538909 HAP1P54257 671 aaPredicted RBP5.61□□□□□ -1.51
CBX3P4-201ENST00000538909 MYSM1Q5VVJ2 828 aa5.61□□□□□ -1.51
CBX3P4-201ENST00000538909 PDXDC2PQ6P474 469 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms