RNA–Protein interactions for RNA: ENST00000538877.5

RAP1B-218, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-218	ENST00000538877	TOM1L2	Q6ZVM7	507 aa		33.88	■■■■□ 3.01
RAP1B-218	ENST00000538877	SBNO2	Q9Y2G9	1366 aa		33.87	■■■■□ 3.01
RAP1B-218	ENST00000538877	NFAT5	O94916	1531 aa		33.87	■■■■□ 3.01
RAP1B-218	ENST00000538877	CARD11	Q9BXL7	1154 aa		33.86	■■■■□ 3.01
RAP1B-218	ENST00000538877	AXIN2	Q9Y2T1	843 aa		33.86	■■■■□ 3.01
RAP1B-218	ENST00000538877	KCNH5	Q8NCM2	988 aa		33.85	■■■■□ 3.01
RAP1B-218	ENST00000538877	WDR17	Q8IZU2	1322 aa		33.84	■■■■□ 3.01
RAP1B-218	ENST00000538877	ARHGEF25	Q86VW2	580 aa		33.84	■■■■□ 3.01
RAP1B-218	ENST00000538877	OVOS2	A0A0G2JMS6	1433 aa		33.84	■■■■□ 3.01
RAP1B-218	ENST00000538877	OVOS2	A0A0J9YW53	1432 aa		33.84	■■■■□ 3.01
RAP1B-218	ENST00000538877	OVOS2	Q6IE36	1432 aa		33.84	■■■■□ 3.01
RAP1B-218	ENST00000538877	USP54	Q70EL1	1684 aa		33.83	■■■■□ 3.01
RAP1B-218	ENST00000538877	TONSL	Q96HA7	1378 aa		33.83	■■■■□ 3.01
RAP1B-218	ENST00000538877	LTN1	O94822	1766 aa		33.82	■■■■□ 3
RAP1B-218	ENST00000538877	DDB1	Q16531	1140 aa		33.8	■■■■□ 3
RAP1B-218	ENST00000538877	CD163L1	Q9NR16	1453 aa		33.79	■■■■□ 3
RAP1B-218	ENST00000538877	RGPD3	A6NKT7	1758 aa	Predicted RBP	33.79	■■■■□ 3
RAP1B-218	ENST00000538877	RGPD4	Q7Z3J3	1758 aa		33.79	■■■■□ 3
RAP1B-218	ENST00000538877	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.78	■■■■□ 3
RAP1B-218	ENST00000538877	C11orf95	C9JLR9	678 aa	Predicted RBP	33.77	■■■■□ 3
RAP1B-218	ENST00000538877	ABCC6	O95255	1503 aa		33.77	■■■■□ 3
RAP1B-218	ENST00000538877	CSB-PGBD3	P0DP91	1061 aa		33.76	■■■□□ 2.99
RAP1B-218	ENST00000538877	TMC1	Q8TDI8	760 aa		33.74	■■■□□ 2.99
RAP1B-218	ENST00000538877	USP31	Q70CQ4	1352 aa		33.72	■■■□□ 2.99
RAP1B-218	ENST00000538877	NME9	Q86XW9	330 aa		33.71	■■■□□ 2.99
RAP1B-218	ENST00000538877	CDCA7	Q9BWT1	371 aa	Predicted RBP	33.71	■■■□□ 2.99
RAP1B-218	ENST00000538877	CARD10	Q9BWT7	1032 aa		33.71	■■■□□ 2.99
RAP1B-218	ENST00000538877	NBPF14	Q5TI25	921 aa		33.7	■■■□□ 2.99
RAP1B-218	ENST00000538877	SLC12A5	Q9H2X9	1139 aa		33.69	■■■□□ 2.98
RAP1B-218	ENST00000538877	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	33.68	■■■□□ 2.98
RAP1B-218	ENST00000538877	MARCH10	Q8NA82	808 aa	Predicted RBP	33.68	■■■□□ 2.98
RAP1B-218	ENST00000538877	EDC4	Q6P2E9	1401 aa	Known RBP	33.67	■■■□□ 2.98
RAP1B-218	ENST00000538877	CCDC7	Q96M83	1385 aa		33.66	■■■□□ 2.98
RAP1B-218	ENST00000538877		A0A1W2PP64	1363 aa		33.65	■■■□□ 2.98
RAP1B-218	ENST00000538877	PTF1A	Q7RTS3	328 aa		33.65	■■■□□ 2.98
RAP1B-218	ENST00000538877	BCL11B	Q9C0K0	894 aa	Predicted RBP	33.63	■■■□□ 2.97
RAP1B-218	ENST00000538877	BCL9	O00512	1426 aa		33.62	■■■□□ 2.97
RAP1B-218	ENST00000538877	TERF2IP	Q9NYB0	399 aa		33.62	■■■□□ 2.97
RAP1B-218	ENST00000538877	TNS2	Q63HR2	1409 aa		33.62	■■■□□ 2.97
RAP1B-218	ENST00000538877	KAT6B	Q8WYB5	2073 aa		33.6	■■■□□ 2.97
RAP1B-218	ENST00000538877	ERBB3	P21860	1342 aa		33.6	■■■□□ 2.97
RAP1B-218	ENST00000538877	PLSCR1	O15162	318 aa		33.6	■■■□□ 2.97
RAP1B-218	ENST00000538877	EXOC5	O00471	708 aa		33.59	■■■□□ 2.97
RAP1B-218	ENST00000538877	PUS7	Q96PZ0	661 aa	Known RBP	33.57	■■■□□ 2.96
RAP1B-218	ENST00000538877	NHS	Q6T4R5	1651 aa		33.57	■■■□□ 2.96
RAP1B-218	ENST00000538877	NLRP2	Q9NX02	1062 aa		33.56	■■■□□ 2.96
RAP1B-218	ENST00000538877	ST20-MTHFS	A0A0A6YYL1	179 aa		33.55	■■■□□ 2.96
RAP1B-218	ENST00000538877	TESK2	Q96S53	571 aa		33.55	■■■□□ 2.96
RAP1B-218	ENST00000538877	FAM208A	Q9UK61	1670 aa	Known RBP	33.54	■■■□□ 2.96
RAP1B-218	ENST00000538877	CASZ1	Q86V15	1759 aa		33.54	■■■□□ 2.96
RAP1B-218	ENST00000538877	ANO8	Q9HCE9	1232 aa	Predicted RBP	33.53	■■■□□ 2.96
RAP1B-218	ENST00000538877	NINL	Q9Y2I6	1382 aa		33.52	■■■□□ 2.96
RAP1B-218	ENST00000538877	ANKRD24	Q8TF21	1146 aa		33.52	■■■□□ 2.96
RAP1B-218	ENST00000538877	IL2RB	P14784	551 aa		33.48	■■■□□ 2.95
RAP1B-218	ENST00000538877	PROM2	Q8N271	834 aa		33.48	■■■□□ 2.95
RAP1B-218	ENST00000538877	SPON1	Q9HCB6	807 aa		33.48	■■■□□ 2.95
RAP1B-218	ENST00000538877	BTAF1	O14981	1849 aa		33.48	■■■□□ 2.95
RAP1B-218	ENST00000538877	TRIM26	Q12899	539 aa	Predicted RBP	33.47	■■■□□ 2.95
RAP1B-218	ENST00000538877	RGPD2	P0DJD1	1756 aa		33.47	■■■□□ 2.95
RAP1B-218	ENST00000538877	KCNQ2	O43526	872 aa		33.46	■■■□□ 2.95
RAP1B-218	ENST00000538877	PPP1R1B	Q9UD71	204 aa	Predicted RBP	33.44	■■■□□ 2.94
RAP1B-218	ENST00000538877	TXNRD1	Q16881	649 aa		33.43	■■■□□ 2.94
RAP1B-218	ENST00000538877	ACSBG1	Q96GR2	724 aa		33.43	■■■□□ 2.94
RAP1B-218	ENST00000538877	SLC24A1	O60721	1099 aa		33.41	■■■□□ 2.94
RAP1B-218	ENST00000538877	IP6K1	Q92551	441 aa		33.41	■■■□□ 2.94
RAP1B-218	ENST00000538877	LTV1	Q96GA3	475 aa	Predicted RBP	33.41	■■■□□ 2.94
RAP1B-218	ENST00000538877	COG3	Q96JB2	828 aa		33.41	■■■□□ 2.94
RAP1B-218	ENST00000538877	ANKRD36B	Q8N2N9	1353 aa		33.4	■■■□□ 2.94
RAP1B-218	ENST00000538877	USP47	Q96K76	1375 aa		33.4	■■■□□ 2.94
RAP1B-218	ENST00000538877	PDGFD	Q9GZP0	370 aa	Predicted RBP	33.39	■■■□□ 2.94
RAP1B-218	ENST00000538877	KIF20B	Q96Q89	1820 aa		33.38	■■■□□ 2.93
RAP1B-218	ENST00000538877	MAP3K19	Q56UN5	1328 aa		33.36	■■■□□ 2.93
RAP1B-218	ENST00000538877	STK32B	Q9NY57	414 aa		33.36	■■■□□ 2.93
RAP1B-218	ENST00000538877	FBLN1	P23142	703 aa		33.35	■■■□□ 2.93
RAP1B-218	ENST00000538877	MYOM1	P52179	1685 aa		33.35	■■■□□ 2.93
RAP1B-218	ENST00000538877	SHANK3	Q9BYB0	1731 aa		33.34	■■■□□ 2.93
RAP1B-218	ENST00000538877	TMF1	P82094	1093 aa		33.34	■■■□□ 2.93
RAP1B-218	ENST00000538877	PAPPA	Q13219	1627 aa		33.34	■■■□□ 2.93
RAP1B-218	ENST00000538877	AMPH	P49418	695 aa		33.33	■■■□□ 2.93
RAP1B-218	ENST00000538877	ZBTB7A	O95365	584 aa		33.32	■■■□□ 2.92
RAP1B-218	ENST00000538877	HOXC9	P31274	260 aa		33.32	■■■□□ 2.92
RAP1B-218	ENST00000538877	DOT1L	Q8TEK3	1739 aa		33.32	■■■□□ 2.92
RAP1B-218	ENST00000538877	SLC15A2	Q16348	729 aa		33.31	■■■□□ 2.92
RAP1B-218	ENST00000538877	DDX54	Q8TDD1	881 aa	Known RBP	33.29	■■■□□ 2.92
RAP1B-218	ENST00000538877	RTL1	A6NKG5	1358 aa		33.26	■■■□□ 2.92
RAP1B-218	ENST00000538877	GGNBP2	Q9H3C7	697 aa		33.26	■■■□□ 2.91
RAP1B-218	ENST00000538877	FYB1	O15117	783 aa		33.25	■■■□□ 2.91
RAP1B-218	ENST00000538877	RRS1	Q15050	365 aa	Known RBP	33.25	■■■□□ 2.91
RAP1B-218	ENST00000538877	ATF5	Q9Y2D1	282 aa	Predicted RBP	33.25	■■■□□ 2.91
RAP1B-218	ENST00000538877	MEGF6	O75095	1541 aa		33.23	■■■□□ 2.91
RAP1B-218	ENST00000538877	PTGER2	P43116	358 aa		33.22	■■■□□ 2.91
RAP1B-218	ENST00000538877	CDCA8	Q53HL2	280 aa		33.2	■■■□□ 2.91
RAP1B-218	ENST00000538877	LY75	O60449	1722 aa		33.19	■■■□□ 2.9
RAP1B-218	ENST00000538877	QSER1	Q2KHR3	1735 aa		33.19	■■■□□ 2.9
RAP1B-218	ENST00000538877	TUBGCP6	Q96RT7	1819 aa		33.18	■■■□□ 2.9
RAP1B-218	ENST00000538877	LRRC4B	Q9NT99	713 aa		33.18	■■■□□ 2.9
RAP1B-218	ENST00000538877	SMG6	Q86US8	1419 aa	Known RBP	33.18	■■■□□ 2.9
RAP1B-218	ENST00000538877	DCAF8L1	A6NGE4	600 aa		33.17	■■■□□ 2.9
RAP1B-218	ENST00000538877	SYTL4	Q96C24	671 aa	Predicted RBP	33.17	■■■□□ 2.9
RAP1B-218	ENST00000538877	MTFR1L	Q9H019	292 aa		33.17	■■■□□ 2.9

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms