RNA–Protein interactions for RNA: ENST00000538647.1

SMCO2-204, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 5

Gene SMCO2, Length 287 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-204ENST00000538647 MPNDQ8N594 471 aa16.9■□□□□ 0.3
SMCO2-204ENST00000538647 PIK3CDO00329 1044 aa16.88■□□□□ 0.29
SMCO2-204ENST00000538647 SLFNL1Q499Z3 407 aa16.88■□□□□ 0.29
SMCO2-204ENST00000538647 SERPINA10Q9UK55 444 aa16.88■□□□□ 0.29
SMCO2-204ENST00000538647 ALDH1A1P00352 501 aa16.87■□□□□ 0.29
SMCO2-204ENST00000538647 SNIP1Q8TAD8 396 aaKnown RBP16.87■□□□□ 0.29
SMCO2-204ENST00000538647 ARID3AQ99856 593 aa16.87■□□□□ 0.29
SMCO2-204ENST00000538647 ESPNB1AK53 854 aa16.86■□□□□ 0.29
SMCO2-204ENST00000538647 FSHRP23945 695 aa16.86■□□□□ 0.29
SMCO2-204ENST00000538647 ADH1CP00326 375 aa16.85■□□□□ 0.29
SMCO2-204ENST00000538647 GRM5P41594 1212 aa16.85■□□□□ 0.29
SMCO2-204ENST00000538647 RAB15P59190 212 aa16.85■□□□□ 0.29
SMCO2-204ENST00000538647 RNF135Q8IUD6 432 aa16.85■□□□□ 0.29
SMCO2-204ENST00000538647 PHTF2Q8N3S3 785 aa16.85■□□□□ 0.29
SMCO2-204ENST00000538647 TTC24A2A3L6 582 aaPredicted RBP16.84■□□□□ 0.29
SMCO2-204ENST00000538647 PRR20EP86478 221 aa16.84■□□□□ 0.29
SMCO2-204ENST00000538647 PRR20CP86479 221 aa16.84■□□□□ 0.29
SMCO2-204ENST00000538647 PRR20DP86480 221 aa16.84■□□□□ 0.29
SMCO2-204ENST00000538647 PRR20BP86481 221 aa16.84■□□□□ 0.29
SMCO2-204ENST00000538647 PRR20AP86496 221 aa16.84■□□□□ 0.29
SMCO2-204ENST00000538647 CYP4X1Q8N118 509 aa16.84■□□□□ 0.29
SMCO2-204ENST00000538647 INTS6LQ5JSJ4 861 aaKnown RBP16.83■□□□□ 0.28
SMCO2-204ENST00000538647 TBC1D9Q6ZT07 1266 aa16.83■□□□□ 0.28
SMCO2-204ENST00000538647 PPP1R12CQ9BZL4 782 aa16.83■□□□□ 0.28
SMCO2-204ENST00000538647 RNF20Q5VTR2 975 aa16.82■□□□□ 0.28
SMCO2-204ENST00000538647 TOR4AQ9NXH8 423 aa16.82■□□□□ 0.28
SMCO2-204ENST00000538647 PALM3A6NDB9 673 aaPredicted RBP16.81■□□□□ 0.28
SMCO2-204ENST00000538647 SEPT12Q8IYM1 358 aa16.81■□□□□ 0.28
SMCO2-204ENST00000538647 TFIP11Q9UBB9 837 aaKnown RBP16.81■□□□□ 0.28
SMCO2-204ENST00000538647 J3QL48 77 aa16.8■□□□□ 0.28
SMCO2-204ENST00000538647 SKIP12755 728 aa16.8■□□□□ 0.28
SMCO2-204ENST00000538647 NFATC2IPQ8NCF5 419 aa16.8■□□□□ 0.28
SMCO2-204ENST00000538647 WASF2Q9Y6W5 498 aa16.8■□□□□ 0.28
SMCO2-204ENST00000538647 NR5A1Q13285 461 aa16.79■□□□□ 0.28
SMCO2-204ENST00000538647 CCDC85AQ96PX6 553 aaPredicted RBP16.79■□□□□ 0.28
SMCO2-204ENST00000538647 PDZRN3Q9UPQ7 1066 aa16.79■□□□□ 0.28
SMCO2-204ENST00000538647 ATP9BO43861 1147 aa16.78■□□□□ 0.28
SMCO2-204ENST00000538647 TSGA10IPQ3SY00 556 aa16.78■□□□□ 0.28
SMCO2-204ENST00000538647 NR3C2P08235 984 aa16.77■□□□□ 0.28
SMCO2-204ENST00000538647 PLPP7Q8NBV4 271 aa16.77■□□□□ 0.28
SMCO2-204ENST00000538647 CHIC2Q9UKJ5 165 aa16.77■□□□□ 0.28
SMCO2-204ENST00000538647 CFAP70Q5T0N1 1121 aa16.76■□□□□ 0.27
SMCO2-204ENST00000538647 ERVH48-1M5A8F1 160 aa16.75■□□□□ 0.27
SMCO2-204ENST00000538647 NNTQ13423 1086 aa16.75■□□□□ 0.27
SMCO2-204ENST00000538647 CCDC116Q8IYX3 515 aa16.75■□□□□ 0.27
SMCO2-204ENST00000538647 DOLKQ9UPQ8 538 aa16.75■□□□□ 0.27
SMCO2-204ENST00000538647 PCDHB11Q9Y5F2 797 aa16.75■□□□□ 0.27
SMCO2-204ENST00000538647 MAFBQ9Y5Q3 323 aaPredicted RBP16.75■□□□□ 0.27
SMCO2-204ENST00000538647 USP17L5A8MUK1 530 aa16.74■□□□□ 0.27
SMCO2-204ENST00000538647 SMPD1P17405 629 aa16.74■□□□□ 0.27
SMCO2-204ENST00000538647 CCDC125Q86Z20 511 aa16.73■□□□□ 0.27
SMCO2-204ENST00000538647 DEPDC4Q8N2C3 294 aa16.73■□□□□ 0.27
SMCO2-204ENST00000538647 LMOD1P29536 600 aaPredicted RBP16.72■□□□□ 0.27
SMCO2-204ENST00000538647 DHX9Q08211 1270 aaKnown RBP16.72■□□□□ 0.27
SMCO2-204ENST00000538647 MAP7D1Q3KQU3 841 aa16.72■□□□□ 0.27
SMCO2-204ENST00000538647 TRAF7Q6Q0C0 670 aa16.72■□□□□ 0.27
SMCO2-204ENST00000538647 USP17L3A6NCW0 530 aa16.71■□□□□ 0.27
SMCO2-204ENST00000538647 USP17L4A6NCW7 530 aa16.71■□□□□ 0.27
SMCO2-204ENST00000538647 RFX1P22670 979 aa16.71■□□□□ 0.27
SMCO2-204ENST00000538647 PPP1R26Q5T8A7 1209 aaPredicted RBP16.71■□□□□ 0.27
SMCO2-204ENST00000538647 USP17L2Q6R6M4 530 aa16.71■□□□□ 0.27
SMCO2-204ENST00000538647 USP17L1Q7RTZ2 530 aa16.71■□□□□ 0.27
SMCO2-204ENST00000538647 CDCA7Q9BWT1 371 aaPredicted RBP16.71■□□□□ 0.27
SMCO2-204ENST00000538647 TMPRSS4Q9NRS4 437 aa16.71■□□□□ 0.27
SMCO2-204ENST00000538647 OXLD1Q5BKU9 147 aa16.7■□□□□ 0.26
SMCO2-204ENST00000538647 NCOA4Q13772 614 aa16.68■□□□□ 0.26
SMCO2-204ENST00000538647 PLEKHM2Q8IWE5 1019 aa16.68■□□□□ 0.26
SMCO2-204ENST00000538647 ZNF784Q8NCA9 323 aaPredicted RBP16.66■□□□□ 0.26
SMCO2-204ENST00000538647 EMILIN1Q9Y6C2 1016 aa16.66■□□□□ 0.26
SMCO2-204ENST00000538647 EML3Q32P44 896 aa16.65■□□□□ 0.26
SMCO2-204ENST00000538647 HPS1Q92902 700 aa16.65■□□□□ 0.26
SMCO2-204ENST00000538647 CYLDQ9NQC7 956 aa16.65■□□□□ 0.26
SMCO2-204ENST00000538647 PGPEP1Q9NXJ5 209 aa16.65■□□□□ 0.26
SMCO2-204ENST00000538647 LZTS3O60299 673 aaPredicted RBP16.64■□□□□ 0.25
SMCO2-204ENST00000538647 GFRA3O60609 400 aa16.64■□□□□ 0.25
SMCO2-204ENST00000538647 SCTRP47872 440 aa16.64■□□□□ 0.25
SMCO2-204ENST00000538647 FAM187AA6NFU0 413 aa16.63■□□□□ 0.25
SMCO2-204ENST00000538647 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.62■□□□□ 0.25
SMCO2-204ENST00000538647 WDR4P57081 412 aaKnown RBP16.62■□□□□ 0.25
SMCO2-204ENST00000538647 KLF16Q9BXK1 252 aaPredicted RBP16.62■□□□□ 0.25
SMCO2-204ENST00000538647 ERVK-9P63128 1117 aa16.61■□□□□ 0.25
SMCO2-204ENST00000538647 MYT1Q01538 1121 aa16.61■□□□□ 0.25
SMCO2-204ENST00000538647 USP4Q13107 963 aa16.61■□□□□ 0.25
SMCO2-204ENST00000538647 ITPKCQ96DU7 683 aa16.61■□□□□ 0.25
SMCO2-204ENST00000538647 NRG2O14511 850 aaPredicted RBP16.6■□□□□ 0.25
SMCO2-204ENST00000538647 LILRA1O75019 489 aa16.6■□□□□ 0.25
SMCO2-204ENST00000538647 ZIC2O95409 532 aaPredicted RBP16.6■□□□□ 0.25
SMCO2-204ENST00000538647 CC2D2BQ6DHV5 1058 aa16.6■□□□□ 0.25
SMCO2-204ENST00000538647 MYCP01106 439 aaPredicted RBP16.59■□□□□ 0.25
SMCO2-204ENST00000538647 ZFAND3Q9H8U3 227 aa16.59■□□□□ 0.25
SMCO2-204ENST00000538647 MKRN1Q9UHC7 482 aaKnown RBP16.59■□□□□ 0.25
SMCO2-204ENST00000538647 NOD1Q9Y239 953 aa16.59■□□□□ 0.25
SMCO2-204ENST00000538647 TIMP2P16035 220 aa16.58■□□□□ 0.24
SMCO2-204ENST00000538647 CDCA8Q53HL2 280 aa16.58■□□□□ 0.24
SMCO2-204ENST00000538647 KANK4Q5T7N3 995 aaPredicted RBP16.58■□□□□ 0.24
SMCO2-204ENST00000538647 TRIM52Q96A61 297 aa16.58■□□□□ 0.24
SMCO2-204ENST00000538647 PBXIP1Q96AQ6 731 aa16.58■□□□□ 0.24
SMCO2-204ENST00000538647 SIRT1Q96EB6 747 aa16.58■□□□□ 0.24
SMCO2-204ENST00000538647 ESF1Q9H501 851 aaKnown RBP16.58■□□□□ 0.24
SMCO2-204ENST00000538647 VRTNQ9H8Y1 702 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms