RNA–Protein interactions for RNA: ENST00000538494.1

SP140-212, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 629 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-212ENST00000538494 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.98□□□□□ -0.97
SP140-212ENST00000538494 YY1P25490 414 aa8.98□□□□□ -0.97
SP140-212ENST00000538494 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.98□□□□□ -0.97
SP140-212ENST00000538494 TSR3Q9UJK0 312 aaKnown RBP8.98□□□□□ -0.97
SP140-212ENST00000538494 HPS5Q9UPZ3 1129 aa8.98□□□□□ -0.97
SP140-212ENST00000538494 PNPLA6Q8IY17 1366 aa8.98□□□□□ -0.97
SP140-212ENST00000538494 TRIM6-TRIM34B2RNG4 842 aa8.97□□□□□ -0.97
SP140-212ENST00000538494 GFRA3O60609 400 aa8.97□□□□□ -0.97
SP140-212ENST00000538494 LAPTM4AQ15012 233 aa8.97□□□□□ -0.97
SP140-212ENST00000538494 FAM98CQ17RN3 349 aaKnown RBP8.97□□□□□ -0.97
SP140-212ENST00000538494 PIK3C2BO00750 1634 aa8.97□□□□□ -0.97
SP140-212ENST00000538494 CCDC141Q6ZP82 1450 aa8.96□□□□□ -0.97
SP140-212ENST00000538494 CEP350Q5VT06 3117 aa8.96□□□□□ -0.97
SP140-212ENST00000538494 IDI1Q13907 227 aa8.96□□□□□ -0.98
SP140-212ENST00000538494 LRCH3Q96II8 777 aa8.96□□□□□ -0.98
SP140-212ENST00000538494 EPAS1Q99814 870 aa8.96□□□□□ -0.98
SP140-212ENST00000538494 TBX22Q9Y458 520 aa8.96□□□□□ -0.98
SP140-212ENST00000538494 EFCAB6Q5THR3 1501 aa8.95□□□□□ -0.98
SP140-212ENST00000538494 TRAF7Q6Q0C0 670 aa8.95□□□□□ -0.98
SP140-212ENST00000538494 USP21Q9UK80 565 aa8.95□□□□□ -0.98
SP140-212ENST00000538494 DCCP43146 1447 aa8.95□□□□□ -0.98
SP140-212ENST00000538494 LCE2BO14633 110 aa8.94□□□□□ -0.98
SP140-212ENST00000538494 ATF3P18847 181 aa8.94□□□□□ -0.98
SP140-212ENST00000538494 DEFB132Q7Z7B7 95 aa8.94□□□□□ -0.98
SP140-212ENST00000538494 FYCO1Q9BQS8 1478 aa8.94□□□□□ -0.98
SP140-212ENST00000538494 ASXL1Q8IXJ9 1541 aa8.94□□□□□ -0.98
SP140-212ENST00000538494 EIF2AK4Q9P2K8 1649 aaKnown RBP8.94□□□□□ -0.98
SP140-212ENST00000538494 PLEKHG1Q9ULL1 1385 aa8.93□□□□□ -0.98
SP140-212ENST00000538494 ZFYVE9O95405 1425 aa8.92□□□□□ -0.98
SP140-212ENST00000538494 PTCH1Q13635 1447 aa8.92□□□□□ -0.98
SP140-212ENST00000538494 MTUS2Q5JR59 1369 aa8.92□□□□□ -0.98
SP140-212ENST00000538494 PIK3R4Q99570 1358 aa8.92□□□□□ -0.98
SP140-212ENST00000538494 DPYSL4O14531 572 aa8.91□□□□□ -0.98
SP140-212ENST00000538494 PPP4CP60510 307 aa8.91□□□□□ -0.98
SP140-212ENST00000538494 DDX12PQ92771 950 aa8.91□□□□□ -0.98
SP140-212ENST00000538494 GJD4Q96KN9 370 aaPredicted RBP8.91□□□□□ -0.98
SP140-212ENST00000538494 CEP152O94986 1710 aa8.91□□□□□ -0.98
SP140-212ENST00000538494 LAMC1P11047 1609 aa8.91□□□□□ -0.98
SP140-212ENST00000538494 UNC13BO14795 1591 aa8.9□□□□□ -0.98
SP140-212ENST00000538494 ARHGEF5Q12774 1597 aa8.9□□□□□ -0.98
SP140-212ENST00000538494 MST1RQ04912 1400 aa8.9□□□□□ -0.98
SP140-212ENST00000538494 PRKD2Q9BZL6 878 aa8.9□□□□□ -0.98
SP140-212ENST00000538494 SPHKAPQ2M3C7 1700 aa8.9□□□□□ -0.98
SP140-212ENST00000538494 NOS1P29475 1434 aa8.89□□□□□ -0.99
SP140-212ENST00000538494 TSPY4P0CV99 314 aa8.89□□□□□ -0.99
SP140-212ENST00000538494 TSPY10P0CW01 314 aa8.89□□□□□ -0.99
SP140-212ENST00000538494 UBTFP17480 764 aaKnown RBP8.89□□□□□ -0.99
SP140-212ENST00000538494 PACS2Q86VP3 889 aa8.89□□□□□ -0.99
SP140-212ENST00000538494 UTRNP46939 3433 aa8.89□□□□□ -0.99
SP140-212ENST00000538494 CEP162Q5TB80 1403 aa8.88□□□□□ -0.99
SP140-212ENST00000538494 ADAMTS13Q76LX8 1427 aa8.88□□□□□ -0.99
SP140-212ENST00000538494 SOS2Q07890 1332 aaPredicted RBP8.88□□□□□ -0.99
SP140-212ENST00000538494 ADAMTS2O95450 1211 aa8.88□□□□□ -0.99
SP140-212ENST00000538494 SLC52A1Q9NWF4 448 aa8.88□□□□□ -0.99
SP140-212ENST00000538494 TSKSQ9UJT2 592 aa8.88□□□□□ -0.99
SP140-212ENST00000538494 TJAP1Q5JTD0 557 aa8.87□□□□□ -0.99
SP140-212ENST00000538494 ADGRB3O60242 1522 aa8.86□□□□□ -0.99
SP140-212ENST00000538494 LMTK2Q8IWU2 1503 aa8.86□□□□□ -0.99
SP140-212ENST00000538494 PPP1R15AO75807 674 aaPredicted RBP8.86□□□□□ -0.99
SP140-212ENST00000538494 CAMK2BQ13554 666 aa8.86□□□□□ -0.99
SP140-212ENST00000538494 MYOM2P54296 1465 aa8.85□□□□□ -0.99
SP140-212ENST00000538494 COL22A1Q8NFW1 1626 aaPredicted RBP8.85□□□□□ -0.99
SP140-212ENST00000538494 SMAPO00193 183 aa8.85□□□□□ -0.99
SP140-212ENST00000538494 NRG2O14511 850 aaPredicted RBP8.85□□□□□ -0.99
SP140-212ENST00000538494 MAP3K7O43318 606 aa8.85□□□□□ -0.99
SP140-212ENST00000538494 HDGFP51858 240 aaKnown RBP8.85□□□□□ -0.99
SP140-212ENST00000538494 SF3B2Q13435 895 aaKnown RBP8.85□□□□□ -0.99
SP140-212ENST00000538494 TSR1Q2NL82 804 aaKnown RBP8.85□□□□□ -0.99
SP140-212ENST00000538494 SAMD7Q7Z3H4 446 aa8.85□□□□□ -0.99
SP140-212ENST00000538494 C14orf37Q86TY3 774 aa8.85□□□□□ -0.99
SP140-212ENST00000538494 DDX17Q92841 729 aaKnown RBP8.85□□□□□ -0.99
SP140-212ENST00000538494 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.85□□□□□ -0.99
SP140-212ENST00000538494 BRWD3Q6RI45 1802 aa8.84□□□□□ -0.99
SP140-212ENST00000538494 GLI3P10071 1580 aa8.84□□□□□ -0.99
SP140-212ENST00000538494 C1QTNF8P60827 252 aa8.84□□□□□ -0.99
SP140-212ENST00000538494 NBR1Q14596 966 aa8.84□□□□□ -0.99
SP140-212ENST00000538494 PPP1R18Q6NYC8 613 aa8.84□□□□□ -0.99
SP140-212ENST00000538494 ZNF784Q8NCA9 323 aaPredicted RBP8.84□□□□□ -0.99
SP140-212ENST00000538494 PTPRUQ92729 1446 aa8.84□□□□□ -0.99
SP140-212ENST00000538494 SENP3-EIF4A1A0A087X0R7 540 aa8.83□□□□□ -1
SP140-212ENST00000538494 MTRQ99707 1265 aa8.83□□□□□ -1
SP140-212ENST00000538494 RALGAPBQ86X10 1494 aa8.83□□□□□ -1
SP140-212ENST00000538494 DISP2A7MBM2 1401 aa8.82□□□□□ -1
SP140-212ENST00000538494 RIMS2Q9UQ26 1411 aa8.82□□□□□ -1
SP140-212ENST00000538494 TRPM2O94759 1503 aa8.82□□□□□ -1
SP140-212ENST00000538494 EHBP1L1Q8N3D4 1523 aa8.82□□□□□ -1
SP140-212ENST00000538494 DUOX2Q9NRD8 1548 aa8.82□□□□□ -1
SP140-212ENST00000538494 BAG6P46379 1132 aa8.82□□□□□ -1
SP140-212ENST00000538494 EN1Q05925 392 aaPredicted RBP8.82□□□□□ -1
SP140-212ENST00000538494 IL21Q9HBE4 155 aa8.82□□□□□ -1
SP140-212ENST00000538494 AMOTL2Q9Y2J4 779 aa8.82□□□□□ -1
SP140-212ENST00000538494 SLIT2O94813 1529 aa8.81□□□□□ -1
SP140-212ENST00000538494 MARF1Q9Y4F3 1742 aaKnown RBP8.81□□□□□ -1
SP140-212ENST00000538494 UNC5CLQ8IV45 518 aa8.81□□□□□ -1
SP140-212ENST00000538494 V9GY48 417 aaPredicted RBP8.81□□□□□ -1
SP140-212ENST00000538494 R3HDM1Q15032 1099 aaKnown RBP8.8□□□□□ -1
SP140-212ENST00000538494 ZNF787Q6DD87 383 aa8.8□□□□□ -1
SP140-212ENST00000538494 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.8□□□□□ -1
SP140-212ENST00000538494 ZNF516Q92618 1163 aa8.8□□□□□ -1
SP140-212ENST00000538494 CDCA7LQ96GN5 454 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms