RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 FBLN1P23142 703 aa14.2□□□□□ -0.14
TNFRSF1A-211ENST00000538363 TNS3Q68CZ2 1445 aa14.2□□□□□ -0.14
TNFRSF1A-211ENST00000538363 MAP2P11137 1827 aaKnown RBP14.2□□□□□ -0.14
TNFRSF1A-211ENST00000538363 POLKQ9UBT6 870 aa14.19□□□□□ -0.14
TNFRSF1A-211ENST00000538363 EMILIN1Q9Y6C2 1016 aa14.19□□□□□ -0.14
TNFRSF1A-211ENST00000538363 USP54Q70EL1 1684 aa14.19□□□□□ -0.14
TNFRSF1A-211ENST00000538363 SOS2Q07890 1332 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF1A-211ENST00000538363 GCP02774 474 aa14.18□□□□□ -0.14
TNFRSF1A-211ENST00000538363 U2AF1L5P0DN76 240 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF1A-211ENST00000538363 HSPA1LP34931 641 aa14.18□□□□□ -0.14
TNFRSF1A-211ENST00000538363 U2AF1Q01081 240 aaKnown RBP eCLIP14.18□□□□□ -0.14
TNFRSF1A-211ENST00000538363 AATKQ6ZMQ8 1374 aa14.18□□□□□ -0.14
TNFRSF1A-211ENST00000538363 COL22A1Q8NFW1 1626 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF1A-211ENST00000538363 ZC3H6P61129 1189 aaKnown RBP14.17□□□□□ -0.14
TNFRSF1A-211ENST00000538363 CABLES1Q8TDN4 633 aa14.17□□□□□ -0.14
TNFRSF1A-211ENST00000538363 PNISRQ8TF01 805 aaKnown RBP14.17□□□□□ -0.14
TNFRSF1A-211ENST00000538363 PNNQ9H307 717 aaKnown RBP14.17□□□□□ -0.14
TNFRSF1A-211ENST00000538363 MED1Q15648 1581 aaPredicted RBP14.17□□□□□ -0.14
TNFRSF1A-211ENST00000538363 OVOS2A0A0J9YW53 1432 aa14.16□□□□□ -0.14
TNFRSF1A-211ENST00000538363 OVOS2Q6IE36 1432 aa14.16□□□□□ -0.14
TNFRSF1A-211ENST00000538363 LTV1Q96GA3 475 aaPredicted RBP14.16□□□□□ -0.14
TNFRSF1A-211ENST00000538363 HNRNPUQ00839 825 aaKnown RBP eCLIP14.15□□□□□ -0.14
TNFRSF1A-211ENST00000538363 MAP3K19Q56UN5 1328 aa14.15□□□□□ -0.15
TNFRSF1A-211ENST00000538363 LTN1O94822 1766 aa14.14□□□□□ -0.15
TNFRSF1A-211ENST00000538363 PNPLA6Q8IY17 1366 aa14.13□□□□□ -0.15
TNFRSF1A-211ENST00000538363 CSB-PGBD3P0DP91 1061 aa14.13□□□□□ -0.15
TNFRSF1A-211ENST00000538363 ADAMTS8Q9UP79 889 aa14.13□□□□□ -0.15
TNFRSF1A-211ENST00000538363 FLT4P35916 1363 aa14.12□□□□□ -0.15
TNFRSF1A-211ENST00000538363 NUTM2BA6NNL0 878 aaPredicted RBP14.12□□□□□ -0.15
TNFRSF1A-211ENST00000538363 NUTM2EB1AL46 878 aaPredicted RBP14.12□□□□□ -0.15
TNFRSF1A-211ENST00000538363 NUTM2AQ8IVF1 878 aaPredicted RBP14.12□□□□□ -0.15
TNFRSF1A-211ENST00000538363 PRDM11Q9NQV5 511 aa14.12□□□□□ -0.15
TNFRSF1A-211ENST00000538363 MAPK8IP3Q9UPT6 1336 aa14.12□□□□□ -0.15
TNFRSF1A-211ENST00000538363 SOCS7O14512 581 aa14.11□□□□□ -0.15
TNFRSF1A-211ENST00000538363 CENPBP07199 599 aaPredicted RBP14.11□□□□□ -0.15
TNFRSF1A-211ENST00000538363 HOXC9P31274 260 aa14.11□□□□□ -0.15
TNFRSF1A-211ENST00000538363 EVA1CP58658 441 aa14.11□□□□□ -0.15
TNFRSF1A-211ENST00000538363 HSP90AB2PQ58FF8 381 aa14.11□□□□□ -0.15
TNFRSF1A-211ENST00000538363 SMG6Q86US8 1419 aaKnown RBP14.11□□□□□ -0.15
TNFRSF1A-211ENST00000538363 IP6K1Q92551 441 aa14.11□□□□□ -0.15
TNFRSF1A-211ENST00000538363 LRP6O75581 1613 aa14.11□□□□□ -0.15
TNFRSF1A-211ENST00000538363 USP19O94966 1318 aa14.11□□□□□ -0.15
TNFRSF1A-211ENST00000538363 SLIT3O75094 1523 aa14.1□□□□□ -0.15
TNFRSF1A-211ENST00000538363 CCDC146Q8IYE0 955 aa14.1□□□□□ -0.15
TNFRSF1A-211ENST00000538363 SALL2Q9Y467 1007 aaPredicted RBP14.1□□□□□ -0.15
TNFRSF1A-211ENST00000538363 PLCH1Q4KWH8 1693 aa14.1□□□□□ -0.15
TNFRSF1A-211ENST00000538363 CHRNA2Q15822 529 aa14.09□□□□□ -0.15
TNFRSF1A-211ENST00000538363 ARHGEF25Q86VW2 580 aa14.09□□□□□ -0.15
TNFRSF1A-211ENST00000538363 CDK12Q9NYV4 1490 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF1A-211ENST00000538363 KIF24Q5T7B8 1368 aa14.09□□□□□ -0.15
TNFRSF1A-211ENST00000538363 JCADQ9P266 1359 aa14.09□□□□□ -0.15
TNFRSF1A-211ENST00000538363 SENP3-EIF4A1A0A087X0R7 540 aa14.08□□□□□ -0.16
TNFRSF1A-211ENST00000538363 HMOX1P09601 288 aa14.08□□□□□ -0.16
TNFRSF1A-211ENST00000538363 EIF4A2Q14240 407 aaKnown RBP14.08□□□□□ -0.16
TNFRSF1A-211ENST00000538363 NFAT5O94916 1531 aa14.08□□□□□ -0.16
TNFRSF1A-211ENST00000538363 RGPD5Q99666 1765 aa14.08□□□□□ -0.16
TNFRSF1A-211ENST00000538363 RTL1A6NKG5 1358 aa14.08□□□□□ -0.16
TNFRSF1A-211ENST00000538363 IL13P35225 146 aa14.07□□□□□ -0.16
TNFRSF1A-211ENST00000538363 POLA2Q14181 598 aa14.07□□□□□ -0.16
TNFRSF1A-211ENST00000538363 RUNDC1Q96C34 613 aa14.07□□□□□ -0.16
TNFRSF1A-211ENST00000538363 ADAMTS2O95450 1211 aa14.06□□□□□ -0.16
TNFRSF1A-211ENST00000538363 MEX3CQ5U5Q3 659 aaKnown RBP14.06□□□□□ -0.16
TNFRSF1A-211ENST00000538363 SULT6B1Q6IMI4 303 aa14.06□□□□□ -0.16
TNFRSF1A-211ENST00000538363 ILDR2Q71H61 639 aa14.06□□□□□ -0.16
TNFRSF1A-211ENST00000538363 ANKRD24Q8TF21 1146 aa14.06□□□□□ -0.16
TNFRSF1A-211ENST00000538363 NLRP2Q9NX02 1062 aa14.06□□□□□ -0.16
TNFRSF1A-211ENST00000538363 PEAK1Q9H792 1746 aa14.06□□□□□ -0.16
TNFRSF1A-211ENST00000538363 INSRP06213 1382 aa14.06□□□□□ -0.16
TNFRSF1A-211ENST00000538363 KIAA0232Q92628 1395 aa14.06□□□□□ -0.16
TNFRSF1A-211ENST00000538363 FCHSD2O94868 740 aa14.05□□□□□ -0.16
TNFRSF1A-211ENST00000538363 NEUROD2Q15784 382 aa14.05□□□□□ -0.16
TNFRSF1A-211ENST00000538363 STRN4Q9NRL3 753 aa14.05□□□□□ -0.16
TNFRSF1A-211ENST00000538363 PRKAR2BP31323 418 aa14.04□□□□□ -0.16
TNFRSF1A-211ENST00000538363 NRAPQ86VF7 1730 aa14.03□□□□□ -0.16
TNFRSF1A-211ENST00000538363 COL14A1Q05707 1796 aaKnown RBP14.02□□□□□ -0.16
TNFRSF1A-211ENST00000538363 LMO7Q8WWI1 1683 aa14.02□□□□□ -0.16
TNFRSF1A-211ENST00000538363 BLMP54132 1417 aaPredicted RBP14.02□□□□□ -0.16
TNFRSF1A-211ENST00000538363 APAF1O14727 1248 aa14.02□□□□□ -0.17
TNFRSF1A-211ENST00000538363 TOM1L2Q6ZVM7 507 aa14.02□□□□□ -0.17
TNFRSF1A-211ENST00000538363 EYA1Q99502 592 aa14.02□□□□□ -0.17
TNFRSF1A-211ENST00000538363 COL18A1P39060 1754 aa14.01□□□□□ -0.17
TNFRSF1A-211ENST00000538363 CPDO75976 1380 aa14.01□□□□□ -0.17
TNFRSF1A-211ENST00000538363 FAM83GA6ND36 823 aa14.01□□□□□ -0.17
TNFRSF1A-211ENST00000538363 COL3A1P02461 1466 aaPredicted RBP14□□□□□ -0.17
TNFRSF1A-211ENST00000538363 TCP11L2Q8N4U5 519 aa14□□□□□ -0.17
TNFRSF1A-211ENST00000538363 NGEFQ8N5V2 710 aa14□□□□□ -0.17
TNFRSF1A-211ENST00000538363 USHBP1Q8N6Y0 703 aa14□□□□□ -0.17
TNFRSF1A-211ENST00000538363 NGLY1Q96IV0 654 aa14□□□□□ -0.17
TNFRSF1A-211ENST00000538363 BTG4Q9NY30 223 aa14□□□□□ -0.17
TNFRSF1A-211ENST00000538363 AXIN2Q9Y2T1 843 aa14□□□□□ -0.17
TNFRSF1A-211ENST00000538363 RRP7AQ9Y3A4 280 aaKnown RBP14□□□□□ -0.17
TNFRSF1A-211ENST00000538363 CCDC9Q9Y3X0 531 aaKnown RBP14□□□□□ -0.17
TNFRSF1A-211ENST00000538363 RGPD2P0DJD1 1756 aa13.99□□□□□ -0.17
TNFRSF1A-211ENST00000538363 RAPGEF4Q8WZA2 1011 aa13.99□□□□□ -0.17
TNFRSF1A-211ENST00000538363 RSPH6AQ9H0K4 717 aa13.99□□□□□ -0.17
TNFRSF1A-211ENST00000538363 NWD2Q9ULI1 1742 aa13.98□□□□□ -0.17
TNFRSF1A-211ENST00000538363 SPATA31A6Q5VVP1 1343 aa13.98□□□□□ -0.17
TNFRSF1A-211ENST00000538363 RIPK4P57078 832 aa13.98□□□□□ -0.17
TNFRSF1A-211ENST00000538363 NBPF6Q5VWK0 638 aa13.98□□□□□ -0.17
TNFRSF1A-211ENST00000538363 AEBP1Q8IUX7 1158 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms