RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 NME9Q86XW9 330 aa30■■■□□ 2.39
CCDC78-215ENST00000538176 C11orf95C9JLR9 678 aaPredicted RBP29.99■■■□□ 2.39
CCDC78-215ENST00000538176 TOM1L2Q6ZVM7 507 aa29.99■■■□□ 2.39
CCDC78-215ENST00000538176 WDR17Q8IZU2 1322 aa29.98■■■□□ 2.39
CCDC78-215ENST00000538176 SOX12O15370 315 aa29.98■■■□□ 2.39
CCDC78-215ENST00000538176 AXIN2Q9Y2T1 843 aa29.98■■■□□ 2.39
CCDC78-215ENST00000538176 ZRANB1Q9UGI0 708 aa29.97■■■□□ 2.39
CCDC78-215ENST00000538176 USP54Q70EL1 1684 aa29.97■■■□□ 2.39
CCDC78-215ENST00000538176 COL18A1P39060 1754 aa29.97■■■□□ 2.39
CCDC78-215ENST00000538176 ABCC6O95255 1503 aa29.96■■■□□ 2.39
CCDC78-215ENST00000538176 ANKRD36BQ8N2N9 1353 aa29.96■■■□□ 2.39
CCDC78-215ENST00000538176 CDCA7Q9BWT1 371 aaPredicted RBP29.96■■■□□ 2.39
CCDC78-215ENST00000538176 BAG6P46379 1132 aa29.95■■■□□ 2.39
CCDC78-215ENST00000538176 NFAT5O94916 1531 aa29.95■■■□□ 2.38
CCDC78-215ENST00000538176 CSB-PGBD3P0DP91 1061 aa29.92■■■□□ 2.38
CCDC78-215ENST00000538176 CARD10Q9BWT7 1032 aa29.92■■■□□ 2.38
CCDC78-215ENST00000538176 COG3Q96JB2 828 aa29.91■■■□□ 2.38
CCDC78-215ENST00000538176 DEFB132Q7Z7B7 95 aa29.9■■■□□ 2.38
CCDC78-215ENST00000538176 FAM182BQ5T319 152 aa29.89■■■□□ 2.38
CCDC78-215ENST00000538176 OVOS2A0A0J9YW53 1432 aa29.88■■■□□ 2.37
CCDC78-215ENST00000538176 OVOS2Q6IE36 1432 aa29.88■■■□□ 2.37
CCDC78-215ENST00000538176 DDB1Q16531 1140 aa29.86■■■□□ 2.37
CCDC78-215ENST00000538176 CCDC7Q96M83 1385 aa29.86■■■□□ 2.37
CCDC78-215ENST00000538176 RGPD1P0DJD0 1748 aa29.85■■■□□ 2.37
CCDC78-215ENST00000538176 PARP4Q9UKK3 1724 aaKnown RBP29.85■■■□□ 2.37
CCDC78-215ENST00000538176 EIF4G2P78344 907 aaKnown RBP eCLIP29.85■■■□□ 2.37
CCDC78-215ENST00000538176 RGPD5Q99666 1765 aa29.82■■■□□ 2.36
CCDC78-215ENST00000538176 DISP2A7MBM2 1401 aa29.82■■■□□ 2.36
CCDC78-215ENST00000538176 ERBB3P21860 1342 aa29.82■■■□□ 2.36
CCDC78-215ENST00000538176 TRIM37O94972 964 aa29.81■■■□□ 2.36
CCDC78-215ENST00000538176 IP6K1Q92551 441 aa29.81■■■□□ 2.36
CCDC78-215ENST00000538176 FYB1O15117 783 aa29.8■■■□□ 2.36
CCDC78-215ENST00000538176 LTN1O94822 1766 aa29.79■■■□□ 2.36
CCDC78-215ENST00000538176 EXOC5O00471 708 aa29.78■■■□□ 2.36
CCDC78-215ENST00000538176 EN1Q05925 392 aaPredicted RBP29.77■■■□□ 2.36
CCDC78-215ENST00000538176 ANKRD24Q8TF21 1146 aa29.77■■■□□ 2.36
CCDC78-215ENST00000538176 NLRP2Q9NX02 1062 aa29.77■■■□□ 2.36
CCDC78-215ENST00000538176 OVOS2A0A0G2JMS6 1433 aa29.77■■■□□ 2.36
CCDC78-215ENST00000538176 PARD3Q8TEW0 1356 aa29.77■■■□□ 2.36
CCDC78-215ENST00000538176 APBA3O96018 575 aa29.75■■■□□ 2.35
CCDC78-215ENST00000538176 AMPHP49418 695 aa29.74■■■□□ 2.35
CCDC78-215ENST00000538176 GGNBP2Q9H3C7 697 aa29.73■■■□□ 2.35
CCDC78-215ENST00000538176 MAP3K19Q56UN5 1328 aa29.71■■■□□ 2.35
CCDC78-215ENST00000538176 BCL9O00512 1426 aa29.71■■■□□ 2.35
CCDC78-215ENST00000538176 HSPA5P11021 654 aaKnown RBP29.71■■■□□ 2.35
CCDC78-215ENST00000538176 IL2RBP14784 551 aa29.71■■■□□ 2.35
CCDC78-215ENST00000538176 CAMKK2Q96RR4 588 aa29.71■■■□□ 2.35
CCDC78-215ENST00000538176 TNS1Q9HBL0 1735 aaKnown RBP29.71■■■□□ 2.35
CCDC78-215ENST00000538176 LRRC37A3O60309 1634 aa29.71■■■□□ 2.35
CCDC78-215ENST00000538176 HOXC9P31274 260 aa29.7■■■□□ 2.35
CCDC78-215ENST00000538176 WNK3Q9BYP7 1800 aa29.7■■■□□ 2.34
CCDC78-215ENST00000538176 RTL1A6NKG5 1358 aa29.69■■■□□ 2.34
CCDC78-215ENST00000538176 CARD14Q9BXL6 1004 aa29.69■■■□□ 2.34
CCDC78-215ENST00000538176 MARCH10Q8NA82 808 aaPredicted RBP29.68■■■□□ 2.34
CCDC78-215ENST00000538176 EZH2Q15910 746 aaKnown RBP29.67■■■□□ 2.34
CCDC78-215ENST00000538176 KIF24Q5T7B8 1368 aa29.66■■■□□ 2.34
CCDC78-215ENST00000538176 BCL11BQ9C0K0 894 aaPredicted RBP29.66■■■□□ 2.34
CCDC78-215ENST00000538176 CGNL1Q0VF96 1302 aa29.66■■■□□ 2.34
CCDC78-215ENST00000538176 NSD3Q9BZ95 1437 aa29.65■■■□□ 2.34
CCDC78-215ENST00000538176 MYOM1P52179 1685 aa29.65■■■□□ 2.34
CCDC78-215ENST00000538176 PEAK1Q9H792 1746 aa29.65■■■□□ 2.34
CCDC78-215ENST00000538176 FAM208AQ9UK61 1670 aaKnown RBP29.64■■■□□ 2.34
CCDC78-215ENST00000538176 PLSCR1O15162 318 aa29.64■■■□□ 2.34
CCDC78-215ENST00000538176 POLR3GLQ9BT43 218 aa29.64■■■□□ 2.34
CCDC78-215ENST00000538176 LTV1Q96GA3 475 aaPredicted RBP29.63■■■□□ 2.33
CCDC78-215ENST00000538176 TNS2Q63HR2 1409 aa29.62■■■□□ 2.33
CCDC78-215ENST00000538176 KIF20BQ96Q89 1820 aa29.62■■■□□ 2.33
CCDC78-215ENST00000538176 FBLN1P23142 703 aa29.62■■■□□ 2.33
CCDC78-215ENST00000538176 RRS1Q15050 365 aaKnown RBP29.62■■■□□ 2.33
CCDC78-215ENST00000538176 NBPF14Q5TI25 921 aa29.59■■■□□ 2.33
CCDC78-215ENST00000538176 SMG6Q86US8 1419 aaKnown RBP29.59■■■□□ 2.33
CCDC78-215ENST00000538176 SBF2Q86WG5 1849 aa29.58■■■□□ 2.33
CCDC78-215ENST00000538176 FLT4P35916 1363 aa29.57■■■□□ 2.32
CCDC78-215ENST00000538176 INSRP06213 1382 aa29.56■■■□□ 2.32
CCDC78-215ENST00000538176 PANK3Q9H999 370 aa29.53■■■□□ 2.32
CCDC78-215ENST00000538176 PSDA5PKW4 1024 aaPredicted RBP29.51■■■□□ 2.31
CCDC78-215ENST00000538176 HSP90AB2PQ58FF8 381 aa29.51■■■□□ 2.31
CCDC78-215ENST00000538176 RGPD3A6NKT7 1758 aaPredicted RBP29.51■■■□□ 2.31
CCDC78-215ENST00000538176 RGPD4Q7Z3J3 1758 aa29.51■■■□□ 2.31
CCDC78-215ENST00000538176 R3HDM1Q15032 1099 aaKnown RBP29.5■■■□□ 2.31
CCDC78-215ENST00000538176 NBPF6Q5VWK0 638 aa29.5■■■□□ 2.31
CCDC78-215ENST00000538176 NBPF4Q96M43 638 aa29.5■■■□□ 2.31
CCDC78-215ENST00000538176 RREB1Q92766 1687 aa29.49■■■□□ 2.31
CCDC78-215ENST00000538176 ZCRB1Q8TBF4 217 aaKnown RBP29.48■■■□□ 2.31
CCDC78-215ENST00000538176 RAPGEF4Q8WZA2 1011 aa29.48■■■□□ 2.31
CCDC78-215ENST00000538176 NSD2O96028 1365 aa29.47■■■□□ 2.31
CCDC78-215ENST00000538176 WASHC2AQ641Q2 1341 aa29.46■■■□□ 2.31
CCDC78-215ENST00000538176 DDX54Q8TDD1 881 aaKnown RBP29.46■■■□□ 2.31
CCDC78-215ENST00000538176 EMILIN1Q9Y6C2 1016 aa29.46■■■□□ 2.31
CCDC78-215ENST00000538176 PPM1GO15355 546 aaPredicted RBP29.44■■■□□ 2.3
CCDC78-215ENST00000538176 PTF1AQ7RTS3 328 aa29.44■■■□□ 2.3
CCDC78-215ENST00000538176 KCNQ2O43526 872 aa29.43■■■□□ 2.3
CCDC78-215ENST00000538176 TATP17735 454 aaPredicted RBP29.43■■■□□ 2.3
CCDC78-215ENST00000538176 KNSTRNQ9Y448 316 aa29.43■■■□□ 2.3
CCDC78-215ENST00000538176 SRCAPQ6ZRS2 3230 aa29.42■■■□□ 2.3
CCDC78-215ENST00000538176 ACSBG1Q96GR2 724 aa29.42■■■□□ 2.3
CCDC78-215ENST00000538176 POLKQ9UBT6 870 aa29.42■■■□□ 2.3
CCDC78-215ENST00000538176 NUP188Q5SRE5 1749 aa29.42■■■□□ 2.3
CCDC78-215ENST00000538176 MAP2P11137 1827 aaKnown RBP29.41■■■□□ 2.3
CCDC78-215ENST00000538176 NHSQ6T4R5 1651 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms